RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 FAM135BQ49AJ0 1406 aa31.91■■■□□ 2.7
PPM1B-203ENST00000378540 HSPA2P54652 639 aa31.89■■■□□ 2.7
PPM1B-203ENST00000378540 CNGB1Q14028 1251 aaPredicted RBP31.89■■■□□ 2.7
PPM1B-203ENST00000378540 CABP2Q9NPB3 220 aa31.89■■■□□ 2.7
PPM1B-203ENST00000378540 SRPK2P78362 688 aaKnown RBP31.88■■■□□ 2.69
PPM1B-203ENST00000378540 TMC1Q8TDI8 760 aa31.86■■■□□ 2.69
PPM1B-203ENST00000378540 MYOM1P52179 1685 aa31.86■■■□□ 2.69
PPM1B-203ENST00000378540 PIK3R4Q99570 1358 aa31.85■■■□□ 2.69
PPM1B-203ENST00000378540 CDK19Q9BWU1 502 aa31.85■■■□□ 2.69
PPM1B-203ENST00000378540 PUS7Q96PZ0 661 aaKnown RBP31.84■■■□□ 2.69
PPM1B-203ENST00000378540 LMTK3Q96Q04 1460 aa31.8■■■□□ 2.68
PPM1B-203ENST00000378540 PER1O15534 1290 aaPredicted RBP31.8■■■□□ 2.68
PPM1B-203ENST00000378540 KCNA6P17658 529 aa31.8■■■□□ 2.68
PPM1B-203ENST00000378540 PRKRIP1Q9H875 184 aaPredicted RBP31.8■■■□□ 2.68
PPM1B-203ENST00000378540 SLC12A5Q9H2X9 1139 aa31.8■■■□□ 2.68
PPM1B-203ENST00000378540 XRN1Q8IZH2 1706 aaKnown RBP31.78■■■□□ 2.68
PPM1B-203ENST00000378540 PTCH1Q13635 1447 aa31.78■■■□□ 2.68
PPM1B-203ENST00000378540 WASLO00401 505 aaPredicted RBP31.77■■■□□ 2.68
PPM1B-203ENST00000378540 CHD2O14647 1828 aaKnown RBP31.76■■■□□ 2.67
PPM1B-203ENST00000378540 KNSTRNQ9Y448 316 aa31.75■■■□□ 2.67
PPM1B-203ENST00000378540 ATAD2Q6PL18 1390 aa31.74■■■□□ 2.67
PPM1B-203ENST00000378540 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.74■■■□□ 2.67
PPM1B-203ENST00000378540 CCER2I3L3R5 266 aa31.72■■■□□ 2.67
PPM1B-203ENST00000378540 CC2D1BQ5T0F9 858 aaKnown RBP31.69■■■□□ 2.66
PPM1B-203ENST00000378540 CARD14Q9BXL6 1004 aa31.68■■■□□ 2.66
PPM1B-203ENST00000378540 KTN1Q86UP2 1357 aaKnown RBP31.68■■■□□ 2.66
PPM1B-203ENST00000378540 NINLQ9Y2I6 1382 aa31.66■■■□□ 2.66
PPM1B-203ENST00000378540 CABP1Q9NZU7 370 aa31.65■■■□□ 2.66
PPM1B-203ENST00000378540 ADGRB2O60241 1585 aa31.65■■■□□ 2.66
PPM1B-203ENST00000378540 NUDT16Q96DE0 195 aaKnown RBP31.64■■■□□ 2.66
PPM1B-203ENST00000378540 RALBP1Q15311 655 aa31.63■■■□□ 2.65
PPM1B-203ENST00000378540 RBM33Q96EV2 1170 aaKnown RBP31.63■■■□□ 2.65
PPM1B-203ENST00000378540 ANKRD36BQ8N2N9 1353 aa31.62■■■□□ 2.65
PPM1B-203ENST00000378540 AMER1Q5JTC6 1135 aaPredicted RBP31.61■■■□□ 2.65
PPM1B-203ENST00000378540 NUTM2FA1L443 756 aa31.61■■■□□ 2.65
PPM1B-203ENST00000378540 STRCQ7RTU9 1775 aa31.6■■■□□ 2.65
PPM1B-203ENST00000378540 NSD3Q9BZ95 1437 aa31.6■■■□□ 2.65
PPM1B-203ENST00000378540 YTHDC1Q96MU7 727 aaKnown RBP31.6■■■□□ 2.65
PPM1B-203ENST00000378540 TERF2IPQ9NYB0 399 aa31.6■■■□□ 2.65
PPM1B-203ENST00000378540 PRR36Q9H6K5 1346 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 NWD1Q149M9 1564 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 A0A1W2PP64 1363 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 PARD3Q8TEW0 1356 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 HDGFL2Q7Z4V5 671 aaPredicted RBP31.57■■■□□ 2.64
PPM1B-203ENST00000378540 CCDC61Q9Y6R9 512 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 PPIP5K1Q6PFW1 1433 aa31.57■■■□□ 2.64
PPM1B-203ENST00000378540 CCDC184Q52MB2 194 aa31.56■■■□□ 2.64
PPM1B-203ENST00000378540 PROSER2Q86WR7 435 aaPredicted RBP31.56■■■□□ 2.64
PPM1B-203ENST00000378540 C14orf37Q86TY3 774 aa31.54■■■□□ 2.64
PPM1B-203ENST00000378540 ATP7BP35670 1465 aa31.53■■■□□ 2.64
PPM1B-203ENST00000378540 CD163L1Q9NR16 1453 aa31.53■■■□□ 2.64
PPM1B-203ENST00000378540 MYBBP1AQ9BQG0 1328 aaKnown RBP31.53■■■□□ 2.64
PPM1B-203ENST00000378540 MRS2Q9HD23 443 aa31.52■■■□□ 2.64
PPM1B-203ENST00000378540 NPC1L1Q9UHC9 1359 aa31.52■■■□□ 2.64
PPM1B-203ENST00000378540 NALCNQ8IZF0 1738 aa31.5■■■□□ 2.63
PPM1B-203ENST00000378540 CGNL1Q0VF96 1302 aa31.49■■■□□ 2.63
PPM1B-203ENST00000378540 NKTRP30414 1462 aaKnown RBP31.47■■■□□ 2.63
PPM1B-203ENST00000378540 ADGRL3Q9HAR2 1447 aa31.47■■■□□ 2.63
PPM1B-203ENST00000378540 STRCP1A6NGW2 1772 aa31.45■■■□□ 2.63
PPM1B-203ENST00000378540 USP32Q8NFA0 1604 aa31.44■■■□□ 2.62
PPM1B-203ENST00000378540 CDC42BPGQ6DT37 1551 aa31.43■■■□□ 2.62
PPM1B-203ENST00000378540 FMN2Q9NZ56 1722 aa31.42■■■□□ 2.62
PPM1B-203ENST00000378540 TOPAZ1Q8N9V7 1692 aa31.42■■■□□ 2.62
PPM1B-203ENST00000378540 PLEKHG3A1L390 1219 aa31.42■■■□□ 2.62
PPM1B-203ENST00000378540 NLRP13Q86W25 1043 aa31.42■■■□□ 2.62
PPM1B-203ENST00000378540 CPSF1Q10570 1443 aaKnown RBP31.42■■■□□ 2.62
PPM1B-203ENST00000378540 MORC1Q86VD1 984 aa31.41■■■□□ 2.62
PPM1B-203ENST00000378540 RGPD8O14715 1765 aaPredicted RBP31.4■■■□□ 2.62
PPM1B-203ENST00000378540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.4■■■□□ 2.62
PPM1B-203ENST00000378540 PMFBP1Q8TBY8 1022 aa31.4■■■□□ 2.62
PPM1B-203ENST00000378540 ACEP12821 1306 aa31.39■■■□□ 2.62
PPM1B-203ENST00000378540 ANKARQ7Z5J8 1434 aa31.39■■■□□ 2.62
PPM1B-203ENST00000378540 PPP2R1AP30153 589 aa31.39■■■□□ 2.62
PPM1B-203ENST00000378540 BRD4O60885 1362 aaPredicted RBP31.39■■■□□ 2.62
PPM1B-203ENST00000378540 ZNF692Q9BU19 519 aaPredicted RBP31.38■■■□□ 2.61
PPM1B-203ENST00000378540 DMRT2Q9Y5R5 561 aa31.38■■■□□ 2.61
PPM1B-203ENST00000378540 TMEM94Q12767 1356 aa31.38■■■□□ 2.61
PPM1B-203ENST00000378540 ITSN1Q15811 1721 aa31.38■■■□□ 2.61
PPM1B-203ENST00000378540 NSD2O96028 1365 aa31.36■■■□□ 2.61
PPM1B-203ENST00000378540 FAM9BQ8IZU0 186 aa31.36■■■□□ 2.61
PPM1B-203ENST00000378540 GGNBP2Q9H3C7 697 aa31.36■■■□□ 2.61
PPM1B-203ENST00000378540 ZNF335Q9H4Z2 1342 aaPredicted RBP31.36■■■□□ 2.61
PPM1B-203ENST00000378540 FYB1O15117 783 aa31.35■■■□□ 2.61
PPM1B-203ENST00000378540 TNNT2P45379 298 aaPredicted RBP31.35■■■□□ 2.61
PPM1B-203ENST00000378540 NGDNQ8NEJ9 315 aaKnown RBP31.35■■■□□ 2.61
PPM1B-203ENST00000378540 C19orf44Q9H6X5 657 aa31.35■■■□□ 2.61
PPM1B-203ENST00000378540 AKAP12Q02952 1782 aa31.35■■■□□ 2.61
PPM1B-203ENST00000378540 EDC4Q6P2E9 1401 aaKnown RBP31.34■■■□□ 2.61
PPM1B-203ENST00000378540 MON2Q7Z3U7 1717 aa31.31■■■□□ 2.6
PPM1B-203ENST00000378540 KIF20BQ96Q89 1820 aa31.29■■■□□ 2.6
PPM1B-203ENST00000378540 NCOA3Q9Y6Q9 1424 aa31.29■■■□□ 2.6
PPM1B-203ENST00000378540 ESCO1Q5FWF5 840 aa31.28■■■□□ 2.6
PPM1B-203ENST00000378540 ATF3P18847 181 aa31.27■■■□□ 2.6
PPM1B-203ENST00000378540 PHF8Q9UPP1 1060 aa31.27■■■□□ 2.6
PPM1B-203ENST00000378540 POLR3AO14802 1390 aaPredicted RBP31.27■■■□□ 2.6
PPM1B-203ENST00000378540 NME9Q86XW9 330 aa31.27■■■□□ 2.6
PPM1B-203ENST00000378540 PNISRQ8TF01 805 aaKnown RBP31.27■■■□□ 2.6
PPM1B-203ENST00000378540 USP6P35125 1406 aa31.26■■■□□ 2.59
PPM1B-203ENST00000378540 TTC21BQ7Z4L5 1316 aa31.24■■■□□ 2.59
PPM1B-203ENST00000378540 ANKRD26Q9UPS8 1709 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms