RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
VPS36-201ENST00000378060 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
VPS36-201ENST00000378060 HDGFL2Q7Z4V5 671 aaPredicted RBP10.57□□□□□ -0.72
VPS36-201ENST00000378060 ERVK-7P63135 1459 aa10.57□□□□□ -0.72
VPS36-201ENST00000378060 KCNJ4P48050 445 aa10.57□□□□□ -0.72
VPS36-201ENST00000378060 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
VPS36-201ENST00000378060 PDE4AP27815 886 aa10.56□□□□□ -0.72
VPS36-201ENST00000378060 OS9Q13438 667 aaPredicted RBP10.56□□□□□ -0.72
VPS36-201ENST00000378060 RPRD2Q5VT52 1461 aaKnown RBP10.56□□□□□ -0.72
VPS36-201ENST00000378060 IDI1Q13907 227 aa10.56□□□□□ -0.72
VPS36-201ENST00000378060 PTPRTO14522 1441 aa10.56□□□□□ -0.72
VPS36-201ENST00000378060 CENPJQ9HC77 1338 aaPredicted RBP10.56□□□□□ -0.72
VPS36-201ENST00000378060 GOLGA6L3A6NEY3 463 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 ST20-MTHFSA0A0A6YYL1 179 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 FGD1P98174 961 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 NOS1P29475 1434 aa10.55□□□□□ -0.72
VPS36-201ENST00000378060 RRP1P56182 461 aaKnown RBP10.55□□□□□ -0.72
VPS36-201ENST00000378060 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
VPS36-201ENST00000378060 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
VPS36-201ENST00000378060 PIK3C2BO00750 1634 aa10.54□□□□□ -0.72
VPS36-201ENST00000378060 CHMP4AQ9BY43 222 aa10.53□□□□□ -0.72
VPS36-201ENST00000378060 ARHGAP31Q2M1Z3 1444 aa10.53□□□□□ -0.72
VPS36-201ENST00000378060 PTPRMP28827 1452 aa10.53□□□□□ -0.72
VPS36-201ENST00000378060 KIF1BO60333 1816 aa10.53□□□□□ -0.72
VPS36-201ENST00000378060 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.72
VPS36-201ENST00000378060 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.72
VPS36-201ENST00000378060 SYAP1Q96A49 352 aaPredicted RBP10.52□□□□□ -0.72
VPS36-201ENST00000378060 USP47Q96K76 1375 aa10.52□□□□□ -0.73
VPS36-201ENST00000378060 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
VPS36-201ENST00000378060 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
VPS36-201ENST00000378060 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
VPS36-201ENST00000378060 CNTLNQ9NXG0 1405 aa10.52□□□□□ -0.73
VPS36-201ENST00000378060 PPP6R1Q9UPN7 881 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 TNRQ92752 1358 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 GZF1Q9H116 711 aaPredicted RBP10.51□□□□□ -0.73
VPS36-201ENST00000378060 SPATA31E1Q6ZUB1 1445 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 TERF2IPQ9NYB0 399 aa10.51□□□□□ -0.73
VPS36-201ENST00000378060 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 E9PSI1 815 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
VPS36-201ENST00000378060 GSE1Q14687 1217 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 PANK3Q9H999 370 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 MYO3AQ8NEV4 1616 aa10.5□□□□□ -0.73
VPS36-201ENST00000378060 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
VPS36-201ENST00000378060 CCDC7Q96M83 1385 aa10.49□□□□□ -0.73
VPS36-201ENST00000378060 HMMRO75330 724 aa10.49□□□□□ -0.73
VPS36-201ENST00000378060 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS36-201ENST00000378060 ADGRB3O60242 1522 aa10.49□□□□□ -0.73
VPS36-201ENST00000378060 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
VPS36-201ENST00000378060 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
VPS36-201ENST00000378060 CLUAP1Q96AJ1 413 aa10.48□□□□□ -0.73
VPS36-201ENST00000378060 ADGRF5Q8IZF2 1346 aa10.48□□□□□ -0.73
VPS36-201ENST00000378060 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
VPS36-201ENST00000378060 CCDC146Q8IYE0 955 aa10.47□□□□□ -0.73
VPS36-201ENST00000378060 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
VPS36-201ENST00000378060 STK26Q9P289 416 aa10.47□□□□□ -0.73
VPS36-201ENST00000378060 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
VPS36-201ENST00000378060 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
VPS36-201ENST00000378060 A2ML1A8K2U0 1454 aa10.46□□□□□ -0.73
VPS36-201ENST00000378060 HSPA2P54652 639 aa10.46□□□□□ -0.74
VPS36-201ENST00000378060 CRBNQ96SW2 442 aa10.46□□□□□ -0.74
VPS36-201ENST00000378060 STAC3Q96MF2 364 aa10.46□□□□□ -0.74
VPS36-201ENST00000378060 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.74
VPS36-201ENST00000378060 DRC7Q8IY82 874 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 SLC52A1Q9NWF4 448 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 PPLO60437 1756 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 SKOR2Q2VWA4 1001 aaPredicted RBP10.45□□□□□ -0.74
VPS36-201ENST00000378060 STK31Q9BXU1 1019 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 NEXMIFQ5QGS0 1516 aa10.45□□□□□ -0.74
VPS36-201ENST00000378060 APBB1O00213 710 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 AAMPQ13685 434 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 CEP170BQ9Y4F5 1589 aaPredicted RBP10.44□□□□□ -0.74
VPS36-201ENST00000378060 A0A0G2JS52 829 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 ST18O60284 1047 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 ZKSCAN2Q63HK3 967 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 PLIN1O60240 522 aa10.44□□□□□ -0.74
VPS36-201ENST00000378060 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
VPS36-201ENST00000378060 LTKP29376 864 aa10.43□□□□□ -0.74
VPS36-201ENST00000378060 CSPP1Q1MSJ5 1256 aa10.43□□□□□ -0.74
VPS36-201ENST00000378060 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
VPS36-201ENST00000378060 CFAP70Q5T0N1 1121 aa10.42□□□□□ -0.74
VPS36-201ENST00000378060 BRD4O60885 1362 aaPredicted RBP10.42□□□□□ -0.74
VPS36-201ENST00000378060 PHF14O94880 888 aa10.42□□□□□ -0.74
VPS36-201ENST00000378060 TMEM132EQ6IEE7 984 aa10.42□□□□□ -0.74
VPS36-201ENST00000378060 PRAG1Q86YV5 1406 aa10.41□□□□□ -0.74
VPS36-201ENST00000378060 RIMS2Q9UQ26 1411 aa10.41□□□□□ -0.74
VPS36-201ENST00000378060 WASHC2AQ641Q2 1341 aa10.41□□□□□ -0.74
VPS36-201ENST00000378060 APAF1O14727 1248 aa10.41□□□□□ -0.74
VPS36-201ENST00000378060 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
VPS36-201ENST00000378060 SOX12O15370 315 aa10.4□□□□□ -0.74
VPS36-201ENST00000378060 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.74
VPS36-201ENST00000378060 COG6Q9Y2V7 657 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms