RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
UCHL3-201ENST00000377595 LRPPRCP42704 1394 aaKnown RBP22.57■■□□□ 1.2
UCHL3-201ENST00000377595 PPLO60437 1756 aa22.57■■□□□ 1.2
UCHL3-201ENST00000377595 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
UCHL3-201ENST00000377595 ABCC11Q96J66 1382 aa22.56■■□□□ 1.2
UCHL3-201ENST00000377595 FOXO3O43524 673 aa22.56■■□□□ 1.2
UCHL3-201ENST00000377595 SETD1AO15047 1707 aaKnown RBP22.55■■□□□ 1.2
UCHL3-201ENST00000377595 C14orf93Q9H972 538 aaKnown RBP22.55■■□□□ 1.2
UCHL3-201ENST00000377595 NHSL1Q5SYE7 1610 aa22.55■■□□□ 1.2
UCHL3-201ENST00000377595 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
UCHL3-201ENST00000377595 CFAP70Q5T0N1 1121 aa22.54■■□□□ 1.2
UCHL3-201ENST00000377595 NPHP3Q7Z494 1330 aa22.54■■□□□ 1.2
UCHL3-201ENST00000377595 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
UCHL3-201ENST00000377595 PLEKHH1Q9ULM0 1364 aa22.52■■□□□ 1.2
UCHL3-201ENST00000377595 RBM6P78332 1123 aaKnown RBP22.52■■□□□ 1.2
UCHL3-201ENST00000377595 UPF1Q92900 1129 aaKnown RBP eCLIP22.52■■□□□ 1.2
UCHL3-201ENST00000377595 SIRT1Q96EB6 747 aa22.52■■□□□ 1.2
UCHL3-201ENST00000377595 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
UCHL3-201ENST00000377595 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
UCHL3-201ENST00000377595 YTHDC2Q9H6S0 1430 aaKnown RBP22.49■■□□□ 1.19
UCHL3-201ENST00000377595 USP21Q9UK80 565 aa22.49■■□□□ 1.19
UCHL3-201ENST00000377595 TECPR2O15040 1411 aa22.48■■□□□ 1.19
UCHL3-201ENST00000377595 SAFB2Q14151 953 aaKnown RBP eCLIP22.47■■□□□ 1.19
UCHL3-201ENST00000377595 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
UCHL3-201ENST00000377595 PRAM1Q96QH2 718 aa22.45■■□□□ 1.18
UCHL3-201ENST00000377595 POGKQ9P215 609 aa22.45■■□□□ 1.18
UCHL3-201ENST00000377595 KRT28Q7Z3Y7 464 aa22.44■■□□□ 1.18
UCHL3-201ENST00000377595 FNBP4Q8N3X1 1017 aaPredicted RBP22.44■■□□□ 1.18
UCHL3-201ENST00000377595 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
UCHL3-201ENST00000377595 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
UCHL3-201ENST00000377595 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
UCHL3-201ENST00000377595 CDK12Q9NYV4 1490 aaPredicted RBP22.42■■□□□ 1.18
UCHL3-201ENST00000377595 LAMC1P11047 1609 aa22.42■■□□□ 1.18
UCHL3-201ENST00000377595 PHF8Q9UPP1 1060 aa22.41■■□□□ 1.18
UCHL3-201ENST00000377595 HRCP23327 699 aa22.4■■□□□ 1.18
UCHL3-201ENST00000377595 PSME1Q06323 249 aa22.39■■□□□ 1.17
UCHL3-201ENST00000377595 TRAK1Q9UPV9 953 aa22.39■■□□□ 1.17
UCHL3-201ENST00000377595 PXDNQ92626 1479 aa22.39■■□□□ 1.17
UCHL3-201ENST00000377595 SPATA31A3Q5VYP0 1347 aa22.38■■□□□ 1.17
UCHL3-201ENST00000377595 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
UCHL3-201ENST00000377595 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
UCHL3-201ENST00000377595 MYOM2P54296 1465 aa22.37■■□□□ 1.17
UCHL3-201ENST00000377595 PLEKHG5O94827 1062 aa22.37■■□□□ 1.17
UCHL3-201ENST00000377595 RGS12O14924 1447 aa22.35■■□□□ 1.17
UCHL3-201ENST00000377595 LMOD2Q6P5Q4 547 aa22.35■■□□□ 1.17
UCHL3-201ENST00000377595 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
UCHL3-201ENST00000377595 PMFBP1Q8TBY8 1022 aa22.34■■□□□ 1.17
UCHL3-201ENST00000377595 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
UCHL3-201ENST00000377595 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
UCHL3-201ENST00000377595 MINK1Q8N4C8 1332 aaPredicted RBP22.31■■□□□ 1.16
UCHL3-201ENST00000377595 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
UCHL3-201ENST00000377595 KNDC1Q76NI1 1749 aa22.31■■□□□ 1.16
UCHL3-201ENST00000377595 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
UCHL3-201ENST00000377595 ATRNO75882 1429 aa22.3■■□□□ 1.16
UCHL3-201ENST00000377595 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
UCHL3-201ENST00000377595 COL22A1Q8NFW1 1626 aaPredicted RBP22.29■■□□□ 1.16
UCHL3-201ENST00000377595 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
UCHL3-201ENST00000377595 FMN2Q9NZ56 1722 aa22.27■■□□□ 1.16
UCHL3-201ENST00000377595 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
UCHL3-201ENST00000377595 ATAD2Q6PL18 1390 aa22.25■■□□□ 1.15
UCHL3-201ENST00000377595 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
UCHL3-201ENST00000377595 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
UCHL3-201ENST00000377595 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
UCHL3-201ENST00000377595 NGDNQ8NEJ9 315 aaKnown RBP22.22■■□□□ 1.15
UCHL3-201ENST00000377595 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
UCHL3-201ENST00000377595 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
UCHL3-201ENST00000377595 KIF1AQ12756 1690 aa22.21■■□□□ 1.15
UCHL3-201ENST00000377595 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
UCHL3-201ENST00000377595 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
UCHL3-201ENST00000377595 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
UCHL3-201ENST00000377595 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
UCHL3-201ENST00000377595 PRR36Q9H6K5 1346 aa22.2■■□□□ 1.14
UCHL3-201ENST00000377595 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
UCHL3-201ENST00000377595 SLIT2O94813 1529 aa22.18■■□□□ 1.14
UCHL3-201ENST00000377595 EIF3AQ14152 1382 aaKnown RBP22.18■■□□□ 1.14
UCHL3-201ENST00000377595 VPS72Q15906 364 aa22.17■■□□□ 1.14
UCHL3-201ENST00000377595 CCDC125Q86Z20 511 aa22.17■■□□□ 1.14
UCHL3-201ENST00000377595 NUDT16Q96DE0 195 aaKnown RBP22.17■■□□□ 1.14
UCHL3-201ENST00000377595 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
UCHL3-201ENST00000377595 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
UCHL3-201ENST00000377595 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
UCHL3-201ENST00000377595 SEPT12Q8IYM1 358 aa22.15■■□□□ 1.14
UCHL3-201ENST00000377595 RALGAPBQ86X10 1494 aa22.15■■□□□ 1.14
UCHL3-201ENST00000377595 NBPF1Q3BBV0 1214 aa22.13■■□□□ 1.13
UCHL3-201ENST00000377595 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
UCHL3-201ENST00000377595 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
UCHL3-201ENST00000377595 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
UCHL3-201ENST00000377595 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
UCHL3-201ENST00000377595 MARF1Q9Y4F3 1742 aaKnown RBP22.1■■□□□ 1.13
UCHL3-201ENST00000377595 TULP4Q9NRJ4 1543 aa22.09■■□□□ 1.13
UCHL3-201ENST00000377595 A0A0G2JS52 829 aa22.08■■□□□ 1.13
UCHL3-201ENST00000377595 MYT1Q01538 1121 aa22.08■■□□□ 1.13
UCHL3-201ENST00000377595 ZRANB1Q9UGI0 708 aa22.08■■□□□ 1.13
UCHL3-201ENST00000377595 CCDC61Q9Y6R9 512 aa22.07■■□□□ 1.12
UCHL3-201ENST00000377595 NBPF8Q3BBV2 869 aa22.06■■□□□ 1.12
UCHL3-201ENST00000377595 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
UCHL3-201ENST00000377595 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
UCHL3-201ENST00000377595 GLI3P10071 1580 aa22.05■■□□□ 1.12
UCHL3-201ENST00000377595 MSH5O43196 834 aa22.05■■□□□ 1.12
UCHL3-201ENST00000377595 SF3B2Q13435 895 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms