RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF830Q96NB3 372 aaPredicted RBP19.92■□□□□ 0.78
FXN-201ENST00000377270 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
FXN-201ENST00000377270 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
FXN-201ENST00000377270 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
FXN-201ENST00000377270 SYNMO15061 1565 aa19.9■□□□□ 0.78
FXN-201ENST00000377270 HECW2Q9P2P5 1572 aa19.9■□□□□ 0.78
FXN-201ENST00000377270 NPATQ14207 1427 aa19.9■□□□□ 0.78
FXN-201ENST00000377270 SMAP1Q8IYB5 467 aaPredicted RBP19.89■□□□□ 0.78
FXN-201ENST00000377270 MROH2AA6NES4 1674 aa19.89■□□□□ 0.78
FXN-201ENST00000377270 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.78
FXN-201ENST00000377270 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.77
FXN-201ENST00000377270 NOS1P29475 1434 aa19.89■□□□□ 0.77
FXN-201ENST00000377270 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
FXN-201ENST00000377270 TMEM51Q9NW97 253 aa19.88■□□□□ 0.77
FXN-201ENST00000377270 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
FXN-201ENST00000377270 INSRP06213 1382 aa19.88■□□□□ 0.77
FXN-201ENST00000377270 BLMP54132 1417 aaPredicted RBP19.88■□□□□ 0.77
FXN-201ENST00000377270 L1TD1Q5T7N2 865 aaKnown RBP19.88■□□□□ 0.77
FXN-201ENST00000377270 NCLP19338 710 aaKnown RBP19.87■□□□□ 0.77
FXN-201ENST00000377270 IFT172Q9UG01 1749 aa19.87■□□□□ 0.77
FXN-201ENST00000377270 VGLL3A8MV65 326 aa19.87■□□□□ 0.77
FXN-201ENST00000377270 SLC4A3P48751 1232 aa19.87■□□□□ 0.77
FXN-201ENST00000377270 ASXL1Q8IXJ9 1541 aa19.86■□□□□ 0.77
FXN-201ENST00000377270 SAMD1Q6SPF0 538 aaPredicted RBP19.86■□□□□ 0.77
FXN-201ENST00000377270 NRXN1Q9ULB1 1477 aa19.85■□□□□ 0.77
FXN-201ENST00000377270 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
FXN-201ENST00000377270 SECISBP2LQ93073 1101 aaKnown RBP19.85■□□□□ 0.77
FXN-201ENST00000377270 NEO1Q92859 1461 aa19.85■□□□□ 0.77
FXN-201ENST00000377270 ZMYM4Q5VZL5 1548 aa19.85■□□□□ 0.77
FXN-201ENST00000377270 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
FXN-201ENST00000377270 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
FXN-201ENST00000377270 MYOM1P52179 1685 aa19.84■□□□□ 0.77
FXN-201ENST00000377270 ERVK-7P63135 1459 aa19.84■□□□□ 0.77
FXN-201ENST00000377270 TEX2Q8IWB9 1127 aa19.83■□□□□ 0.77
FXN-201ENST00000377270 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
FXN-201ENST00000377270 ABCC3O15438 1527 aa19.82■□□□□ 0.76
FXN-201ENST00000377270 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
FXN-201ENST00000377270 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
FXN-201ENST00000377270 POGKQ9P215 609 aa19.81■□□□□ 0.76
FXN-201ENST00000377270 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
FXN-201ENST00000377270 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
FXN-201ENST00000377270 RPGRIP1LQ68CZ1 1315 aa19.79■□□□□ 0.76
FXN-201ENST00000377270 HAP1P54257 671 aaPredicted RBP19.79■□□□□ 0.76
FXN-201ENST00000377270 PIK3C2GO75747 1445 aa19.78■□□□□ 0.76
FXN-201ENST00000377270 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
FXN-201ENST00000377270 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
FXN-201ENST00000377270 PRDM10Q9NQV6 1147 aa19.77■□□□□ 0.76
FXN-201ENST00000377270 CHRM1P11229 460 aaPredicted RBP19.77■□□□□ 0.76
FXN-201ENST00000377270 SBNO2Q9Y2G9 1366 aa19.77■□□□□ 0.76
FXN-201ENST00000377270 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.75
FXN-201ENST00000377270 PPLO60437 1756 aa19.76■□□□□ 0.75
FXN-201ENST00000377270 PPP4R3BQ5MIZ7 849 aa19.76■□□□□ 0.75
FXN-201ENST00000377270 DIP2CQ9Y2E4 1556 aa19.76■□□□□ 0.75
FXN-201ENST00000377270 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
FXN-201ENST00000377270 MYO3AQ8NEV4 1616 aa19.75■□□□□ 0.75
FXN-201ENST00000377270 UTP14CQ5TAP6 766 aaKnown RBP19.73■□□□□ 0.75
FXN-201ENST00000377270 SIGLEC1Q9BZZ2 1709 aa19.73■□□□□ 0.75
FXN-201ENST00000377270 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
FXN-201ENST00000377270 PLEKHH1Q9ULM0 1364 aa19.72■□□□□ 0.75
FXN-201ENST00000377270 YEATS2Q9ULM3 1422 aa19.72■□□□□ 0.75
FXN-201ENST00000377270 PLIN1O60240 522 aa19.72■□□□□ 0.75
FXN-201ENST00000377270 XRCC6P12956 609 aaKnown RBP eCLIP19.72■□□□□ 0.75
FXN-201ENST00000377270 DMTNQ08495 405 aa19.72■□□□□ 0.75
FXN-201ENST00000377270 ADGRB1O14514 1584 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 IDI1Q13907 227 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 RICTORQ6R327 1708 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 MAP7D2Q96T17 732 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
FXN-201ENST00000377270 ANP32BQ92688 251 aaKnown RBP19.7■□□□□ 0.74
FXN-201ENST00000377270 SKAP1Q86WV1 359 aa19.69■□□□□ 0.74
FXN-201ENST00000377270 ESPNB1AK53 854 aa19.69■□□□□ 0.74
FXN-201ENST00000377270 KIAA1211Q6ZU35 1233 aa19.69■□□□□ 0.74
FXN-201ENST00000377270 PANK2Q9BZ23 570 aa19.69■□□□□ 0.74
FXN-201ENST00000377270 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
FXN-201ENST00000377270 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
FXN-201ENST00000377270 QRICH2Q9H0J4 1663 aa19.67■□□□□ 0.74
FXN-201ENST00000377270 PIK3C2BO00750 1634 aa19.67■□□□□ 0.74
FXN-201ENST00000377270 ZNF521Q96K83 1311 aa19.67■□□□□ 0.74
FXN-201ENST00000377270 DUSP27Q5VZP5 1158 aa19.67■□□□□ 0.74
FXN-201ENST00000377270 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
FXN-201ENST00000377270 ERBB4Q15303 1308 aa19.66■□□□□ 0.74
FXN-201ENST00000377270 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
FXN-201ENST00000377270 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
FXN-201ENST00000377270 FAM69CQ0P6D2 419 aa19.66■□□□□ 0.74
FXN-201ENST00000377270 APAF1O14727 1248 aa19.65■□□□□ 0.74
FXN-201ENST00000377270 RIPK4P57078 832 aa19.65■□□□□ 0.74
FXN-201ENST00000377270 MORC1Q86VD1 984 aa19.65■□□□□ 0.74
FXN-201ENST00000377270 NEXMIFQ5QGS0 1516 aa19.65■□□□□ 0.74
FXN-201ENST00000377270 FAM13BQ9NYF5 915 aa19.65■□□□□ 0.74
FXN-201ENST00000377270 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
FXN-201ENST00000377270 ARID3AQ99856 593 aa19.64■□□□□ 0.73
FXN-201ENST00000377270 ZC3H13Q5T200 1668 aaKnown RBP19.64■□□□□ 0.73
FXN-201ENST00000377270 FAM161AQ3B820 660 aa19.63■□□□□ 0.73
FXN-201ENST00000377270 HOMEZQ8IX15 550 aa19.63■□□□□ 0.73
FXN-201ENST00000377270 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
FXN-201ENST00000377270 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
FXN-201ENST00000377270 GLI2P10070 1586 aa19.62■□□□□ 0.73
FXN-201ENST00000377270 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
FXN-201ENST00000377270 SAFB2Q14151 953 aaKnown RBP eCLIP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms