RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 PLEKHH1Q9ULM0 1364 aa24.82■■□□□ 1.56
IRF3-203ENST00000377139 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
IRF3-203ENST00000377139 ATAD2Q6PL18 1390 aa24.81■■□□□ 1.56
IRF3-203ENST00000377139 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
IRF3-203ENST00000377139 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
IRF3-203ENST00000377139 PTCH1Q13635 1447 aa24.8■■□□□ 1.56
IRF3-203ENST00000377139 XRN1Q8IZH2 1706 aaKnown RBP24.8■■□□□ 1.56
IRF3-203ENST00000377139 KDM4FA0A1W2PPD8 638 aa24.79■■□□□ 1.56
IRF3-203ENST00000377139 ROBO2Q9HCK4 1378 aa24.79■■□□□ 1.56
IRF3-203ENST00000377139 SRPK2P78362 688 aaKnown RBP24.79■■□□□ 1.56
IRF3-203ENST00000377139 RALBP1Q15311 655 aa24.79■■□□□ 1.56
IRF3-203ENST00000377139 KNSTRNQ9Y448 316 aa24.78■■□□□ 1.56
IRF3-203ENST00000377139 NPHP4O75161 1426 aaPredicted RBP24.77■■□□□ 1.56
IRF3-203ENST00000377139 AMOTL2Q9Y2J4 779 aa24.77■■□□□ 1.56
IRF3-203ENST00000377139 ADGRB2O60241 1585 aa24.77■■□□□ 1.56
IRF3-203ENST00000377139 CABP2Q9NPB3 220 aa24.75■■□□□ 1.55
IRF3-203ENST00000377139 TMC1Q8TDI8 760 aa24.75■■□□□ 1.55
IRF3-203ENST00000377139 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
IRF3-203ENST00000377139 NPC1L1Q9UHC9 1359 aa24.74■■□□□ 1.55
IRF3-203ENST00000377139 PARD3Q8TEW0 1356 aa24.74■■□□□ 1.55
IRF3-203ENST00000377139 CHD2O14647 1828 aaKnown RBP24.73■■□□□ 1.55
IRF3-203ENST00000377139 SLC12A5Q9H2X9 1139 aa24.72■■□□□ 1.55
IRF3-203ENST00000377139 ANKRD36BQ8N2N9 1353 aa24.72■■□□□ 1.55
IRF3-203ENST00000377139 WASLO00401 505 aaPredicted RBP24.71■■□□□ 1.55
IRF3-203ENST00000377139 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.71■■□□□ 1.55
IRF3-203ENST00000377139 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.55
IRF3-203ENST00000377139 USP32Q8NFA0 1604 aa24.69■■□□□ 1.54
IRF3-203ENST00000377139 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
IRF3-203ENST00000377139 YTHDC1Q96MU7 727 aaKnown RBP24.69■■□□□ 1.54
IRF3-203ENST00000377139 AMER1Q5JTC6 1135 aaPredicted RBP24.68■■□□□ 1.54
IRF3-203ENST00000377139 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
IRF3-203ENST00000377139 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
IRF3-203ENST00000377139 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
IRF3-203ENST00000377139 MRS2Q9HD23 443 aa24.66■■□□□ 1.54
IRF3-203ENST00000377139 NSD3Q9BZ95 1437 aa24.66■■□□□ 1.54
IRF3-203ENST00000377139 TERF2IPQ9NYB0 399 aa24.64■■□□□ 1.54
IRF3-203ENST00000377139 ATP7BP35670 1465 aa24.64■■□□□ 1.54
IRF3-203ENST00000377139 KCNA6P17658 529 aa24.64■■□□□ 1.53
IRF3-203ENST00000377139 BRD4O60885 1362 aaPredicted RBP24.63■■□□□ 1.53
IRF3-203ENST00000377139 LMTK3Q96Q04 1460 aa24.63■■□□□ 1.53
IRF3-203ENST00000377139 NWD1Q149M9 1564 aa24.63■■□□□ 1.53
IRF3-203ENST00000377139 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
IRF3-203ENST00000377139 NLRP13Q86W25 1043 aa24.61■■□□□ 1.53
IRF3-203ENST00000377139 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
IRF3-203ENST00000377139 CD163L1Q9NR16 1453 aa24.61■■□□□ 1.53
IRF3-203ENST00000377139 HDGFL2Q7Z4V5 671 aaPredicted RBP24.61■■□□□ 1.53
IRF3-203ENST00000377139 CCDC184Q52MB2 194 aa24.6■■□□□ 1.53
IRF3-203ENST00000377139 CGNL1Q0VF96 1302 aa24.59■■□□□ 1.53
IRF3-203ENST00000377139 PPIP5K1Q6PFW1 1433 aa24.58■■□□□ 1.53
IRF3-203ENST00000377139 NSD2O96028 1365 aa24.58■■□□□ 1.53
IRF3-203ENST00000377139 NUDT16Q96DE0 195 aaKnown RBP24.58■■□□□ 1.53
IRF3-203ENST00000377139 CABP1Q9NZU7 370 aa24.58■■□□□ 1.53
IRF3-203ENST00000377139 CCDC61Q9Y6R9 512 aa24.58■■□□□ 1.53
IRF3-203ENST00000377139 TOPAZ1Q8N9V7 1692 aa24.57■■□□□ 1.52
IRF3-203ENST00000377139 CDC42BPGQ6DT37 1551 aa24.56■■□□□ 1.52
IRF3-203ENST00000377139 ITSN1Q15811 1721 aa24.55■■□□□ 1.52
IRF3-203ENST00000377139 HSPA2P54652 639 aa24.54■■□□□ 1.52
IRF3-203ENST00000377139 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
IRF3-203ENST00000377139 NALCNQ8IZF0 1738 aa24.53■■□□□ 1.52
IRF3-203ENST00000377139 CPSF1Q10570 1443 aaKnown RBP24.53■■□□□ 1.52
IRF3-203ENST00000377139 PRR36Q9H6K5 1346 aa24.52■■□□□ 1.52
IRF3-203ENST00000377139 AKAP12Q02952 1782 aa24.52■■□□□ 1.52
IRF3-203ENST00000377139 ANKARQ7Z5J8 1434 aa24.51■■□□□ 1.51
IRF3-203ENST00000377139 FMN2Q9NZ56 1722 aa24.51■■□□□ 1.51
IRF3-203ENST00000377139 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
IRF3-203ENST00000377139 ANKRD26Q9UPS8 1709 aa24.5■■□□□ 1.51
IRF3-203ENST00000377139 ADGRL3Q9HAR2 1447 aa24.5■■□□□ 1.51
IRF3-203ENST00000377139 PPP2R1AP30153 589 aa24.5■■□□□ 1.51
IRF3-203ENST00000377139 KIF20BQ96Q89 1820 aa24.49■■□□□ 1.51
IRF3-203ENST00000377139 STRCQ7RTU9 1775 aa24.49■■□□□ 1.51
IRF3-203ENST00000377139 FAM9BQ8IZU0 186 aa24.48■■□□□ 1.51
IRF3-203ENST00000377139 EDC4Q6P2E9 1401 aaKnown RBP24.48■■□□□ 1.51
IRF3-203ENST00000377139 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
IRF3-203ENST00000377139 ZNF692Q9BU19 519 aaPredicted RBP24.47■■□□□ 1.51
IRF3-203ENST00000377139 PLEKHG3A1L390 1219 aa24.46■■□□□ 1.51
IRF3-203ENST00000377139 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
IRF3-203ENST00000377139 RGPD8O14715 1765 aaPredicted RBP24.43■■□□□ 1.5
IRF3-203ENST00000377139 NUTM2FA1L443 756 aa24.42■■□□□ 1.5
IRF3-203ENST00000377139 FYB1O15117 783 aa24.41■■□□□ 1.5
IRF3-203ENST00000377139 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
IRF3-203ENST00000377139 NRKQ7Z2Y5 1582 aa24.4■■□□□ 1.5
IRF3-203ENST00000377139 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
IRF3-203ENST00000377139 STRCP1A6NGW2 1772 aa24.4■■□□□ 1.5
IRF3-203ENST00000377139 ACEP12821 1306 aa24.39■■□□□ 1.5
IRF3-203ENST00000377139 C14orf37Q86TY3 774 aa24.39■■□□□ 1.49
IRF3-203ENST00000377139 POLR3AO14802 1390 aaPredicted RBP24.38■■□□□ 1.49
IRF3-203ENST00000377139 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.492e-8■□□□□ 8.3
IRF3-203ENST00000377139 USP6P35125 1406 aa24.37■■□□□ 1.49
IRF3-203ENST00000377139 INSRP06213 1382 aa24.37■■□□□ 1.49
IRF3-203ENST00000377139 GGNBP2Q9H3C7 697 aa24.37■■□□□ 1.49
IRF3-203ENST00000377139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
IRF3-203ENST00000377139 RBM33Q96EV2 1170 aaKnown RBP24.35■■□□□ 1.49
IRF3-203ENST00000377139 DCCP43146 1447 aa24.33■■□□□ 1.48
IRF3-203ENST00000377139 NGDNQ8NEJ9 315 aaKnown RBP24.32■■□□□ 1.48
IRF3-203ENST00000377139 C19orf44Q9H6X5 657 aa24.32■■□□□ 1.48
IRF3-203ENST00000377139 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
IRF3-203ENST00000377139 PMFBP1Q8TBY8 1022 aa24.32■■□□□ 1.48
IRF3-203ENST00000377139 TMEM94Q12767 1356 aa24.31■■□□□ 1.48
IRF3-203ENST00000377139 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
IRF3-203ENST00000377139 DMRT2Q9Y5R5 561 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms