RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 POGKQ9P215 609 aa23.8■■□□□ 1.4
CTSA-204ENST00000372484 USP32Q8NFA0 1604 aa23.79■■□□□ 1.4
CTSA-204ENST00000372484 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
CTSA-204ENST00000372484 TSHZ2Q9NRE2 1034 aa23.78■■□□□ 1.4
CTSA-204ENST00000372484 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
CTSA-204ENST00000372484 MORC1Q86VD1 984 aa23.77■■□□□ 1.4
CTSA-204ENST00000372484 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
CTSA-204ENST00000372484 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
CTSA-204ENST00000372484 CDCA7LQ96GN5 454 aa23.76■■□□□ 1.39
CTSA-204ENST00000372484 NINLQ9Y2I6 1382 aa23.74■■□□□ 1.39
CTSA-204ENST00000372484 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
CTSA-204ENST00000372484 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.73■■□□□ 1.39
CTSA-204ENST00000372484 TNRQ92752 1358 aa23.73■■□□□ 1.39
CTSA-204ENST00000372484 RCAN3Q9UKA8 241 aa23.72■■□□□ 1.39
CTSA-204ENST00000372484 ATAD2Q6PL18 1390 aa23.72■■□□□ 1.39
CTSA-204ENST00000372484 POLR3AO14802 1390 aaPredicted RBP23.71■■□□□ 1.39
CTSA-204ENST00000372484 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
CTSA-204ENST00000372484 NSD2O96028 1365 aa23.69■■□□□ 1.38
CTSA-204ENST00000372484 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
CTSA-204ENST00000372484 A0A1W2PP64 1363 aa23.68■■□□□ 1.38
CTSA-204ENST00000372484 PLEKHH1Q9ULM0 1364 aa23.68■■□□□ 1.38
CTSA-204ENST00000372484 B4GALNT3Q6L9W6 998 aa23.68■■□□□ 1.38
CTSA-204ENST00000372484 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
CTSA-204ENST00000372484 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
CTSA-204ENST00000372484 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
CTSA-204ENST00000372484 RRP1P56182 461 aaKnown RBP23.66■■□□□ 1.38
CTSA-204ENST00000372484 CDK19Q9BWU1 502 aa23.66■■□□□ 1.38
CTSA-204ENST00000372484 TERF2IPQ9NYB0 399 aa23.65■■□□□ 1.38
CTSA-204ENST00000372484 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
CTSA-204ENST00000372484 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
CTSA-204ENST00000372484 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
CTSA-204ENST00000372484 ZNF521Q96K83 1311 aa23.63■■□□□ 1.37
CTSA-204ENST00000372484 SHPRHQ149N8 1683 aa23.62■■□□□ 1.37
CTSA-204ENST00000372484 METP08581 1390 aa23.62■■□□□ 1.37
CTSA-204ENST00000372484 APAF1O14727 1248 aa23.62■■□□□ 1.37
CTSA-204ENST00000372484 MTHFSP49914 203 aa23.62■■□□□ 1.37
CTSA-204ENST00000372484 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
CTSA-204ENST00000372484 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
CTSA-204ENST00000372484 CD163L1Q9NR16 1453 aa23.6■■□□□ 1.37
CTSA-204ENST00000372484 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
CTSA-204ENST00000372484 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
CTSA-204ENST00000372484 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
CTSA-204ENST00000372484 CABP1Q9NZU7 370 aa23.58■■□□□ 1.37
CTSA-204ENST00000372484 CEBPAP49715 358 aaPredicted RBP23.57■■□□□ 1.36
CTSA-204ENST00000372484 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
CTSA-204ENST00000372484 NLRP1Q9C000 1473 aa23.57■■□□□ 1.36
CTSA-204ENST00000372484 CCDC136Q96JN2 1154 aa23.56■■□□□ 1.36
CTSA-204ENST00000372484 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
CTSA-204ENST00000372484 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
CTSA-204ENST00000372484 KNDC1Q76NI1 1749 aa23.55■■□□□ 1.36
CTSA-204ENST00000372484 ANKRD26Q9UPS8 1709 aa23.55■■□□□ 1.36
CTSA-204ENST00000372484 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
CTSA-204ENST00000372484 C3P01024 1663 aa23.54■■□□□ 1.36
CTSA-204ENST00000372484 FYB1O15117 783 aa23.54■■□□□ 1.36
CTSA-204ENST00000372484 SLFN5Q08AF3 891 aa23.53■■□□□ 1.36
CTSA-204ENST00000372484 FER1L4A9Z1Z3 1794 aa23.53■■□□□ 1.36
CTSA-204ENST00000372484 MED14O60244 1454 aa23.52■■□□□ 1.36
CTSA-204ENST00000372484 TECPR2O15040 1411 aa23.52■■□□□ 1.36
CTSA-204ENST00000372484 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
CTSA-204ENST00000372484 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
CTSA-204ENST00000372484 SIRT1Q96EB6 747 aa23.51■■□□□ 1.35
CTSA-204ENST00000372484 ATP7BP35670 1465 aa23.5■■□□□ 1.35
CTSA-204ENST00000372484 KIF20BQ96Q89 1820 aa23.5■■□□□ 1.35
CTSA-204ENST00000372484 RUNDC1Q96C34 613 aa23.5■■□□□ 1.35
CTSA-204ENST00000372484 CPS1P31327 1500 aa23.5■■□□□ 1.35
CTSA-204ENST00000372484 EXOC6Q8TAG9 804 aa23.5■■□□□ 1.35
CTSA-204ENST00000372484 LTKP29376 864 aa23.49■■□□□ 1.35
CTSA-204ENST00000372484 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
CTSA-204ENST00000372484 PLIN1O60240 522 aa23.48■■□□□ 1.35
CTSA-204ENST00000372484 TRMT2AQ8IZ69 625 aaKnown RBP23.48■■□□□ 1.35
CTSA-204ENST00000372484 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
CTSA-204ENST00000372484 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
CTSA-204ENST00000372484 E9PSI1 815 aa23.47■■□□□ 1.35
CTSA-204ENST00000372484 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
CTSA-204ENST00000372484 RBM19Q9Y4C8 960 aaKnown RBP23.45■■□□□ 1.35
CTSA-204ENST00000372484 EID1Q9Y6B2 187 aa23.45■■□□□ 1.35
CTSA-204ENST00000372484 PPIP5K1Q6PFW1 1433 aa23.45■■□□□ 1.34
CTSA-204ENST00000372484 U2AF1L5P0DN76 240 aaPredicted RBP23.45■■□□□ 1.34
CTSA-204ENST00000372484 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
CTSA-204ENST00000372484 WWC1Q8IX03 1113 aa23.45■■□□□ 1.34
CTSA-204ENST00000372484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.44■■□□□ 1.34
CTSA-204ENST00000372484 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
CTSA-204ENST00000372484 NKTRP30414 1462 aaKnown RBP23.44■■□□□ 1.34
CTSA-204ENST00000372484 IQSEC2Q5JU85 1478 aa23.44■■□□□ 1.34
CTSA-204ENST00000372484 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
CTSA-204ENST00000372484 NUDT16Q96DE0 195 aaKnown RBP23.42■■□□□ 1.34
CTSA-204ENST00000372484 DMRT2Q9Y5R5 561 aa23.42■■□□□ 1.34
CTSA-204ENST00000372484 ROBO2Q9HCK4 1378 aa23.42■■□□□ 1.34
CTSA-204ENST00000372484 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
CTSA-204ENST00000372484 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
CTSA-204ENST00000372484 SLIT1O75093 1534 aa23.41■■□□□ 1.34
CTSA-204ENST00000372484 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
CTSA-204ENST00000372484 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
CTSA-204ENST00000372484 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.34
CTSA-204ENST00000372484 ARHGAP23Q9P227 1491 aa23.39■■□□□ 1.34
CTSA-204ENST00000372484 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.33
CTSA-204ENST00000372484 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
CTSA-204ENST00000372484 THEMISQ8N1K5 641 aaPredicted RBP23.38■■□□□ 1.33
CTSA-204ENST00000372484 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
CTSA-204ENST00000372484 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms