RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KNSTRNQ9Y448 316 aa35.89■■■■□ 3.34
ATPAF1-202ENST00000371937 CPS1P31327 1500 aa35.88■■■■□ 3.33
ATPAF1-202ENST00000371937 CENPBP07199 599 aaPredicted RBP35.87■■■■□ 3.33
ATPAF1-202ENST00000371937 CNGB1Q14028 1251 aaPredicted RBP35.87■■■■□ 3.33
ATPAF1-202ENST00000371937 WAPLQ7Z5K2 1190 aa35.87■■■■□ 3.33
ATPAF1-202ENST00000371937 PLEKHH1Q9ULM0 1364 aa35.83■■■■□ 3.33
ATPAF1-202ENST00000371937 SRPK2P78362 688 aaKnown RBP35.83■■■■□ 3.33
ATPAF1-202ENST00000371937 TMC1Q8TDI8 760 aa35.83■■■■□ 3.33
ATPAF1-202ENST00000371937 CABP2Q9NPB3 220 aa35.83■■■■□ 3.33
ATPAF1-202ENST00000371937 ATAD2Q6PL18 1390 aa35.81■■■■□ 3.32
ATPAF1-202ENST00000371937 PARD3Q8TEW0 1356 aa35.81■■■■□ 3.32
ATPAF1-202ENST00000371937 NINLQ9Y2I6 1382 aa35.81■■■■□ 3.32
ATPAF1-202ENST00000371937 MRS2Q9HD23 443 aa35.79■■■■□ 3.32
ATPAF1-202ENST00000371937 MYBBP1AQ9BQG0 1328 aaKnown RBP35.78■■■■□ 3.32
ATPAF1-202ENST00000371937 SLC12A5Q9H2X9 1139 aa35.78■■■■□ 3.32
ATPAF1-202ENST00000371937 PIK3R4Q99570 1358 aa35.77■■■■□ 3.32
ATPAF1-202ENST00000371937 CDK19Q9BWU1 502 aa35.77■■■■□ 3.32
ATPAF1-202ENST00000371937 NPC1L1Q9UHC9 1359 aa35.77■■■■□ 3.32
ATPAF1-202ENST00000371937 CC2D1BQ5T0F9 858 aaKnown RBP35.76■■■■□ 3.32
ATPAF1-202ENST00000371937 PTPRUQ92729 1446 aa35.76■■■■□ 3.32
ATPAF1-202ENST00000371937 ROBO2Q9HCK4 1378 aa35.76■■■■□ 3.32
ATPAF1-202ENST00000371937 AMER1Q5JTC6 1135 aaPredicted RBP35.76■■■■□ 3.31
ATPAF1-202ENST00000371937 AMOTL2Q9Y2J4 779 aa35.75■■■■□ 3.31
ATPAF1-202ENST00000371937 CCDC184Q52MB2 194 aa35.74■■■■□ 3.31
ATPAF1-202ENST00000371937 CARD14Q9BXL6 1004 aa35.72■■■■□ 3.31
ATPAF1-202ENST00000371937 PTCH1Q13635 1447 aa35.71■■■■□ 3.31
ATPAF1-202ENST00000371937 ANKRD36BQ8N2N9 1353 aa35.7■■■■□ 3.31
ATPAF1-202ENST00000371937 WASLO00401 505 aaPredicted RBP35.69■■■■□ 3.3
ATPAF1-202ENST00000371937 BRD4O60885 1362 aaPredicted RBP35.68■■■■□ 3.3
ATPAF1-202ENST00000371937 NLRP13Q86W25 1043 aa35.67■■■■□ 3.3
ATPAF1-202ENST00000371937 NPHP4O75161 1426 aaPredicted RBP35.65■■■■□ 3.3
ATPAF1-202ENST00000371937 XRN1Q8IZH2 1706 aaKnown RBP35.64■■■■□ 3.3
ATPAF1-202ENST00000371937 NSD3Q9BZ95 1437 aa35.64■■■■□ 3.3
ATPAF1-202ENST00000371937 KDM4FA0A1W2PPD8 638 aa35.63■■■■□ 3.29
ATPAF1-202ENST00000371937 TERF2IPQ9NYB0 399 aa35.63■■■■□ 3.29
ATPAF1-202ENST00000371937 ADGRB2O60241 1585 aa35.62■■■■□ 3.29
ATPAF1-202ENST00000371937 USP32Q8NFA0 1604 aa35.59■■■■□ 3.29
ATPAF1-202ENST00000371937 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.58■■■■□ 3.29
ATPAF1-202ENST00000371937 CGNL1Q0VF96 1302 aa35.57■■■■□ 3.28
ATPAF1-202ENST00000371937 FAM9BQ8IZU0 186 aa35.57■■■■□ 3.28
ATPAF1-202ENST00000371937 A0A1W2PP64 1363 aa35.57■■■■□ 3.28
ATPAF1-202ENST00000371937 HDGFL2Q7Z4V5 671 aaPredicted RBP35.56■■■■□ 3.28
ATPAF1-202ENST00000371937 CABP1Q9NZU7 370 aa35.56■■■■□ 3.28
ATPAF1-202ENST00000371937 NCKAP5LQ9HCH0 1330 aa35.56■■■■□ 3.28
ATPAF1-202ENST00000371937 KCNA6P17658 529 aa35.55■■■■□ 3.28
ATPAF1-202ENST00000371937 CHD2O14647 1828 aaKnown RBP35.55■■■■□ 3.28
ATPAF1-202ENST00000371937 NUDT16Q96DE0 195 aaKnown RBP35.53■■■■□ 3.28
ATPAF1-202ENST00000371937 ATP7BP35670 1465 aa35.52■■■■□ 3.28
ATPAF1-202ENST00000371937 CD163L1Q9NR16 1453 aa35.52■■■■□ 3.28
ATPAF1-202ENST00000371937 PNISRQ8TF01 805 aaKnown RBP35.51■■■■□ 3.28
ATPAF1-202ENST00000371937 CCDC61Q9Y6R9 512 aa35.51■■■■□ 3.28
ATPAF1-202ENST00000371937 NSD2O96028 1365 aa35.51■■■■□ 3.27
ATPAF1-202ENST00000371937 PPP2R1AP30153 589 aa35.5■■■■□ 3.27
ATPAF1-202ENST00000371937 PPIP5K1Q6PFW1 1433 aa35.49■■■■□ 3.27
ATPAF1-202ENST00000371937 MORC1Q86VD1 984 aa35.43■■■■□ 3.26
ATPAF1-202ENST00000371937 HNRNPUQ00839 825 aaKnown RBP eCLIP35.43■■■■□ 3.26
ATPAF1-202ENST00000371937 PRR36Q9H6K5 1346 aa35.41■■■■□ 3.26
ATPAF1-202ENST00000371937 CPSF1Q10570 1443 aaKnown RBP35.41■■■■□ 3.26
ATPAF1-202ENST00000371937 CDC42BPGQ6DT37 1551 aa35.38■■■■□ 3.25
ATPAF1-202ENST00000371937 ZNF692Q9BU19 519 aaPredicted RBP35.36■■■■□ 3.25
ATPAF1-202ENST00000371937 NWD1Q149M9 1564 aa35.35■■■■□ 3.25
ATPAF1-202ENST00000371937 LMTK3Q96Q04 1460 aa35.35■■■■□ 3.25
ATPAF1-202ENST00000371937 HSPA2P54652 639 aa35.34■■■■□ 3.25
ATPAF1-202ENST00000371937 TOPAZ1Q8N9V7 1692 aa35.34■■■■□ 3.25
ATPAF1-202ENST00000371937 EDC4Q6P2E9 1401 aaKnown RBP35.33■■■■□ 3.25
ATPAF1-202ENST00000371937 PLEKHG3A1L390 1219 aa35.33■■■■□ 3.25
ATPAF1-202ENST00000371937 FYB1O15117 783 aa35.32■■■■□ 3.25
ATPAF1-202ENST00000371937 ANKARQ7Z5J8 1434 aa35.31■■■■□ 3.24
ATPAF1-202ENST00000371937 NUTM2FA1L443 756 aa35.29■■■■□ 3.24
ATPAF1-202ENST00000371937 ITSN1Q15811 1721 aa35.29■■■■□ 3.24
ATPAF1-202ENST00000371937 AKAP12Q02952 1782 aa35.28■■■■□ 3.24
ATPAF1-202ENST00000371937 GGNBP2Q9H3C7 697 aa35.27■■■■□ 3.24
ATPAF1-202ENST00000371937 ANKRD26Q9UPS8 1709 aa35.27■■■■□ 3.24
ATPAF1-202ENST00000371937 INSRP06213 1382 aa35.27■■■■□ 3.24
ATPAF1-202ENST00000371937 MON2Q7Z3U7 1717 aa35.26■■■■□ 3.24
ATPAF1-202ENST00000371937 ADGRL3Q9HAR2 1447 aa35.26■■■■□ 3.24
ATPAF1-202ENST00000371937 KIF20BQ96Q89 1820 aa35.26■■■■□ 3.23
ATPAF1-202ENST00000371937 NALCNQ8IZF0 1738 aa35.26■■■■□ 3.23
ATPAF1-202ENST00000371937 TNNT2P45379 298 aaPredicted RBP35.25■■■■□ 3.23
ATPAF1-202ENST00000371937 NKTRP30414 1462 aaKnown RBP35.25■■■■□ 3.23
ATPAF1-202ENST00000371937 FMN2Q9NZ56 1722 aa35.25■■■■□ 3.23
ATPAF1-202ENST00000371937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.25■■■■□ 3.23
ATPAF1-202ENST00000371937 ACEP12821 1306 aa35.24■■■■□ 3.23
ATPAF1-202ENST00000371937 POLR3AO14802 1390 aaPredicted RBP35.23■■■■□ 3.23
ATPAF1-202ENST00000371937 ZBED9Q6R2W3 1325 aa35.22■■■■□ 3.23
ATPAF1-202ENST00000371937 WDR43Q15061 677 aaKnown RBP eCLIP35.2■■■■□ 3.23
ATPAF1-202ENST00000371937 PROSER2Q86WR7 435 aaPredicted RBP35.2■■■■□ 3.23
ATPAF1-202ENST00000371937 C14orf37Q86TY3 774 aa35.19■■■■□ 3.22
ATPAF1-202ENST00000371937 RBM33Q96EV2 1170 aaKnown RBP35.18■■■■□ 3.22
ATPAF1-202ENST00000371937 RGPD8O14715 1765 aaPredicted RBP35.16■■■■□ 3.22
ATPAF1-202ENST00000371937 USP6P35125 1406 aa35.16■■■■□ 3.22
ATPAF1-202ENST00000371937 MTHFSP49914 203 aa35.16■■■■□ 3.22
ATPAF1-202ENST00000371937 CFAP53Q96M91 514 aa35.15■■■■□ 3.22
ATPAF1-202ENST00000371937 NGDNQ8NEJ9 315 aaKnown RBP35.14■■■■□ 3.22
ATPAF1-202ENST00000371937 STRCQ7RTU9 1775 aa35.14■■■■□ 3.22
ATPAF1-202ENST00000371937 PMFBP1Q8TBY8 1022 aa35.13■■■■□ 3.21
ATPAF1-202ENST00000371937 ADAMTS8Q9UP79 889 aa35.13■■■■□ 3.21
ATPAF1-202ENST00000371937 TTC21BQ7Z4L5 1316 aa35.12■■■■□ 3.21
ATPAF1-202ENST00000371937 NME9Q86XW9 330 aa35.11■■■■□ 3.21
ATPAF1-202ENST00000371937 SCAF1Q9H7N4 1312 aaKnown RBP35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms