RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 PARD3Q8TEW0 1356 aa26.01■■□□□ 1.75
UBL4A-202ENST00000369660 AMER1Q5JTC6 1135 aaPredicted RBP26■■□□□ 1.75
UBL4A-202ENST00000369660 PLEKHG1Q9ULL1 1385 aa25.99■■□□□ 1.75
UBL4A-202ENST00000369660 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
UBL4A-202ENST00000369660 CDK19Q9BWU1 502 aa25.98■■□□□ 1.75
UBL4A-202ENST00000369660 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
UBL4A-202ENST00000369660 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
UBL4A-202ENST00000369660 SLIT1O75093 1534 aa25.95■■□□□ 1.74
UBL4A-202ENST00000369660 ARHGAP23Q9P227 1491 aa25.95■■□□□ 1.74
UBL4A-202ENST00000369660 NSD3Q9BZ95 1437 aa25.93■■□□□ 1.74
UBL4A-202ENST00000369660 ROBO2Q9HCK4 1378 aa25.92■■□□□ 1.74
UBL4A-202ENST00000369660 NLRP13Q86W25 1043 aa25.92■■□□□ 1.74
UBL4A-202ENST00000369660 GTF3C3Q9Y5Q9 886 aa25.92■■□□□ 1.74
UBL4A-202ENST00000369660 TNNT2P45379 298 aaPredicted RBP25.91■■□□□ 1.74
UBL4A-202ENST00000369660 PNISRQ8TF01 805 aaKnown RBP25.9■■□□□ 1.74
UBL4A-202ENST00000369660 NUTM2FA1L443 756 aa25.9■■□□□ 1.74
UBL4A-202ENST00000369660 PTPRUQ92729 1446 aa25.89■■□□□ 1.74
UBL4A-202ENST00000369660 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
UBL4A-202ENST00000369660 NCKAP5LQ9HCH0 1330 aa25.89■■□□□ 1.74
UBL4A-202ENST00000369660 DLC1Q96QB1 1528 aa25.88■■□□□ 1.73
UBL4A-202ENST00000369660 CABP1Q9NZU7 370 aa25.88■■□□□ 1.73
UBL4A-202ENST00000369660 BRD4O60885 1362 aaPredicted RBP25.88■■□□□ 1.73
UBL4A-202ENST00000369660 PPP2R1AP30153 589 aa25.87■■□□□ 1.73
UBL4A-202ENST00000369660 SETD1BQ9UPS6 1966 aaKnown RBP25.86■■□□□ 1.73
UBL4A-202ENST00000369660 ANKLE2Q86XL3 938 aa25.85■■□□□ 1.73
UBL4A-202ENST00000369660 MED14O60244 1454 aa25.85■■□□□ 1.73
UBL4A-202ENST00000369660 A0A1W2PP64 1363 aa25.84■■□□□ 1.73
UBL4A-202ENST00000369660 WASLO00401 505 aaPredicted RBP25.84■■□□□ 1.73
UBL4A-202ENST00000369660 TBX22Q9Y458 520 aa25.83■■□□□ 1.73
UBL4A-202ENST00000369660 ATAD2Q6PL18 1390 aa25.83■■□□□ 1.72
UBL4A-202ENST00000369660 ANKRD36BQ8N2N9 1353 aa25.83■■□□□ 1.72
UBL4A-202ENST00000369660 RBM33Q96EV2 1170 aaKnown RBP25.82■■□□□ 1.72
UBL4A-202ENST00000369660 PUS7Q96PZ0 661 aaKnown RBP25.82■■□□□ 1.72
UBL4A-202ENST00000369660 TECPR2O15040 1411 aa25.81■■□□□ 1.72
UBL4A-202ENST00000369660 CPS1P31327 1500 aa25.8■■□□□ 1.72
UBL4A-202ENST00000369660 KNDC1Q76NI1 1749 aa25.8■■□□□ 1.72
UBL4A-202ENST00000369660 FAM135BQ49AJ0 1406 aa25.79■■□□□ 1.72
UBL4A-202ENST00000369660 KCNA6P17658 529 aa25.79■■□□□ 1.72
UBL4A-202ENST00000369660 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
UBL4A-202ENST00000369660 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
UBL4A-202ENST00000369660 SALL2Q9Y467 1007 aaPredicted RBP25.78■■□□□ 1.72
UBL4A-202ENST00000369660 CGNL1Q0VF96 1302 aa25.77■■□□□ 1.72
UBL4A-202ENST00000369660 CD163L1Q9NR16 1453 aa25.76■■□□□ 1.71
UBL4A-202ENST00000369660 NUDT16Q96DE0 195 aaKnown RBP25.76■■□□□ 1.71
UBL4A-202ENST00000369660 GGNBP2Q9H3C7 697 aa25.76■■□□□ 1.71
UBL4A-202ENST00000369660 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.76■■□□□ 1.71
UBL4A-202ENST00000369660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.76■■□□□ 1.71
UBL4A-202ENST00000369660 TERF2IPQ9NYB0 399 aa25.76■■□□□ 1.71
UBL4A-202ENST00000369660 NPC1L1Q9UHC9 1359 aa25.76■■□□□ 1.71
UBL4A-202ENST00000369660 SIRT1Q96EB6 747 aa25.75■■□□□ 1.71
UBL4A-202ENST00000369660 PRR36Q9H6K5 1346 aa25.73■■□□□ 1.71
UBL4A-202ENST00000369660 HDGFL2Q7Z4V5 671 aaPredicted RBP25.73■■□□□ 1.71
UBL4A-202ENST00000369660 PPIP5K1Q6PFW1 1433 aa25.73■■□□□ 1.71
UBL4A-202ENST00000369660 NINLQ9Y2I6 1382 aa25.71■■□□□ 1.71
UBL4A-202ENST00000369660 HSPA2P54652 639 aa25.7■■□□□ 1.7
UBL4A-202ENST00000369660 KDM4FA0A1W2PPD8 638 aa25.69■■□□□ 1.7
UBL4A-202ENST00000369660 ADAMTS8Q9UP79 889 aa25.69■■□□□ 1.7
UBL4A-202ENST00000369660 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
UBL4A-202ENST00000369660 FYB1O15117 783 aa25.68■■□□□ 1.7
UBL4A-202ENST00000369660 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
UBL4A-202ENST00000369660 ZBED9Q6R2W3 1325 aa25.66■■□□□ 1.7
UBL4A-202ENST00000369660 FBLN1P23142 703 aa25.66■■□□□ 1.7
UBL4A-202ENST00000369660 WDR43Q15061 677 aaKnown RBP eCLIP25.65■■□□□ 1.7
UBL4A-202ENST00000369660 NPHP4O75161 1426 aaPredicted RBP25.64■■□□□ 1.7
UBL4A-202ENST00000369660 ATP7BP35670 1465 aa25.64■■□□□ 1.7
UBL4A-202ENST00000369660 PTCH1Q13635 1447 aa25.64■■□□□ 1.69
UBL4A-202ENST00000369660 MTHFSP49914 203 aa25.63■■□□□ 1.69
UBL4A-202ENST00000369660 PMFBP1Q8TBY8 1022 aa25.63■■□□□ 1.69
UBL4A-202ENST00000369660 ZRANB1Q9UGI0 708 aa25.62■■□□□ 1.69
UBL4A-202ENST00000369660 XRN1Q8IZH2 1706 aaKnown RBP25.62■■□□□ 1.69
UBL4A-202ENST00000369660 USP32Q8NFA0 1604 aa25.61■■□□□ 1.69
UBL4A-202ENST00000369660 NME9Q86XW9 330 aa25.6■■□□□ 1.69
UBL4A-202ENST00000369660 CCDC146Q8IYE0 955 aa25.6■■□□□ 1.69
UBL4A-202ENST00000369660 ACEP12821 1306 aa25.58■■□□□ 1.68
UBL4A-202ENST00000369660 CHD2O14647 1828 aaKnown RBP25.57■■□□□ 1.68
UBL4A-202ENST00000369660 CPSF1Q10570 1443 aaKnown RBP25.57■■□□□ 1.68
UBL4A-202ENST00000369660 PIK3R4Q99570 1358 aa25.57■■□□□ 1.68
UBL4A-202ENST00000369660 ADGRB2O60241 1585 aa25.57■■□□□ 1.68
UBL4A-202ENST00000369660 RGPD8O14715 1765 aaPredicted RBP25.56■■□□□ 1.68
UBL4A-202ENST00000369660 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
UBL4A-202ENST00000369660 NSD2O96028 1365 aa25.55■■□□□ 1.68
UBL4A-202ENST00000369660 PPM1GO15355 546 aaPredicted RBP25.54■■□□□ 1.68
UBL4A-202ENST00000369660 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
UBL4A-202ENST00000369660 CDC42BPGQ6DT37 1551 aa25.53■■□□□ 1.68
UBL4A-202ENST00000369660 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
UBL4A-202ENST00000369660 KIF20BQ96Q89 1820 aa25.51■■□□□ 1.67
UBL4A-202ENST00000369660 EDC4Q6P2E9 1401 aaKnown RBP25.5■■□□□ 1.67
UBL4A-202ENST00000369660 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
UBL4A-202ENST00000369660 POLR3AO14802 1390 aaPredicted RBP25.49■■□□□ 1.67
UBL4A-202ENST00000369660 BLMP54132 1417 aaPredicted RBP25.49■■□□□ 1.67
UBL4A-202ENST00000369660 ITSN1Q15811 1721 aa25.49■■□□□ 1.67
UBL4A-202ENST00000369660 SOX12O15370 315 aa25.48■■□□□ 1.67
UBL4A-202ENST00000369660 NALCNQ8IZF0 1738 aa25.47■■□□□ 1.67
UBL4A-202ENST00000369660 PLEKHG3A1L390 1219 aa25.47■■□□□ 1.67
UBL4A-202ENST00000369660 ZNF692Q9BU19 519 aaPredicted RBP25.47■■□□□ 1.67
UBL4A-202ENST00000369660 TOPAZ1Q8N9V7 1692 aa25.46■■□□□ 1.67
UBL4A-202ENST00000369660 IRX6P78412 446 aaPredicted RBP25.46■■□□□ 1.67
UBL4A-202ENST00000369660 PROSER2Q86WR7 435 aaPredicted RBP25.46■■□□□ 1.67
UBL4A-202ENST00000369660 CDCA7LQ96GN5 454 aa25.46■■□□□ 1.67
UBL4A-202ENST00000369660 CFAP53Q96M91 514 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms