RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 ZMYM3Q14202 1370 aa21.41■■□□□ 1.02
DKC1-201ENST00000369550 ASXL2Q76L83 1435 aa21.41■■□□□ 1.02
DKC1-201ENST00000369550 MFAP1P55081 439 aaKnown RBP21.41■■□□□ 1.02
DKC1-201ENST00000369550 NPC1L1Q9UHC9 1359 aa21.4■■□□□ 1.02
DKC1-201ENST00000369550 BCL2L13Q9BXK5 485 aa21.4■■□□□ 1.02
DKC1-201ENST00000369550 ESPNB1AK53 854 aa21.4■■□□□ 1.02
DKC1-201ENST00000369550 RLBP1P12271 317 aa21.4■■□□□ 1.02
DKC1-201ENST00000369550 RARSP54136 660 aaKnown RBP21.4■■□□□ 1.02
DKC1-201ENST00000369550 ATP10AO60312 1499 aa21.39■■□□□ 1.02
DKC1-201ENST00000369550 TRIM44Q96DX7 344 aaPredicted RBP21.39■■□□□ 1.01
DKC1-201ENST00000369550 RNF17Q9BXT8 1623 aaKnown RBP21.39■■□□□ 1.01
DKC1-201ENST00000369550 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.01
DKC1-201ENST00000369550 TNNQ9UQP3 1299 aa21.38■■□□□ 1.01
DKC1-201ENST00000369550 AFAP1Q8N556 730 aa21.38■■□□□ 1.01
DKC1-201ENST00000369550 HSCBQ8IWL3 235 aa21.37■■□□□ 1.01
DKC1-201ENST00000369550 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
DKC1-201ENST00000369550 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
DKC1-201ENST00000369550 SCAF11Q99590 1463 aaKnown RBP21.35■■□□□ 1.01
DKC1-201ENST00000369550 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
DKC1-201ENST00000369550 ADGRL1O94910 1474 aa21.34■■□□□ 1.01
DKC1-201ENST00000369550 ISY1Q9ULR0 285 aaKnown RBP21.34■■□□□ 1.01
DKC1-201ENST00000369550 ERBB4Q15303 1308 aa21.33■■□□□ 1
DKC1-201ENST00000369550 DEPDC5O75140 1603 aa21.32■■□□□ 1
DKC1-201ENST00000369550 NPM1P06748 294 aaKnown RBP eCLIP21.31■■□□□ 1
DKC1-201ENST00000369550 SCAPERQ9BY12 1400 aa21.31■■□□□ 1
DKC1-201ENST00000369550 IQGAP1P46940 1657 aa21.3■■□□□ 1
DKC1-201ENST00000369550 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
DKC1-201ENST00000369550 MADDQ8WXG6 1647 aa21.28■■□□□ 1
DKC1-201ENST00000369550 TNNT2P45379 298 aaPredicted RBP21.28■■□□□ 1
DKC1-201ENST00000369550 MVPQ14764 893 aaKnown RBP21.28■■□□□ 1
DKC1-201ENST00000369550 TCP11L2Q8N4U5 519 aa21.28■■□□□ 1
DKC1-201ENST00000369550 RUNDC1Q96C34 613 aa21.28■■□□□ 1
DKC1-201ENST00000369550 CARD14Q9BXL6 1004 aa21.27■■□□□ 1
DKC1-201ENST00000369550 MYOM1P52179 1685 aa21.27■■□□□ 1
DKC1-201ENST00000369550 POLR3AO14802 1390 aaPredicted RBP21.25■□□□□ 0.99
DKC1-201ENST00000369550 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
DKC1-201ENST00000369550 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
DKC1-201ENST00000369550 TET3O43151 1660 aa21.24■□□□□ 0.99
DKC1-201ENST00000369550 WDR63Q8IWG1 891 aa21.24■□□□□ 0.99
DKC1-201ENST00000369550 TNPO1Q92973 898 aaKnown RBP21.24■□□□□ 0.99
DKC1-201ENST00000369550 VWDEQ8N2E2 1590 aa21.24■□□□□ 0.99
DKC1-201ENST00000369550 TRPM2O94759 1503 aa21.23■□□□□ 0.99
DKC1-201ENST00000369550 TPM2P07951 284 aa21.23■□□□□ 0.99
DKC1-201ENST00000369550 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
DKC1-201ENST00000369550 KDM5AP29375 1690 aaKnown RBP21.23■□□□□ 0.99
DKC1-201ENST00000369550 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
DKC1-201ENST00000369550 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
DKC1-201ENST00000369550 GAS2L3Q86XJ1 694 aa21.23■□□□□ 0.99
DKC1-201ENST00000369550 DZIP1LQ8IYY4 767 aaKnown RBP21.23■□□□□ 0.99
DKC1-201ENST00000369550 KANK1Q14678 1352 aa21.22■□□□□ 0.99
DKC1-201ENST00000369550 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
DKC1-201ENST00000369550 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
DKC1-201ENST00000369550 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
DKC1-201ENST00000369550 PTPRTO14522 1441 aa21.21■□□□□ 0.99
DKC1-201ENST00000369550 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
DKC1-201ENST00000369550 SKOR2Q2VWA4 1001 aaPredicted RBP21.2■□□□□ 0.98
DKC1-201ENST00000369550 KIDINS220Q9ULH0 1771 aa21.2■□□□□ 0.98
DKC1-201ENST00000369550 STAC3Q96MF2 364 aa21.2■□□□□ 0.98
DKC1-201ENST00000369550 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
DKC1-201ENST00000369550 CEP152O94986 1710 aa21.18■□□□□ 0.98
DKC1-201ENST00000369550 DDIT3P35638 169 aa21.18■□□□□ 0.98
DKC1-201ENST00000369550 ITPRIPQ8IWB1 547 aa21.18■□□□□ 0.98
DKC1-201ENST00000369550 MROH1Q8NDA8 1641 aa21.17■□□□□ 0.98
DKC1-201ENST00000369550 KIF3BO15066 747 aa21.17■□□□□ 0.98
DKC1-201ENST00000369550 KIAA1211Q6ZU35 1233 aa21.17■□□□□ 0.98
DKC1-201ENST00000369550 ANP32BQ92688 251 aaKnown RBP21.17■□□□□ 0.98
DKC1-201ENST00000369550 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
DKC1-201ENST00000369550 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
DKC1-201ENST00000369550 PDCL3Q9H2J4 239 aa21.17■□□□□ 0.98
DKC1-201ENST00000369550 CIZ1Q9ULV3 898 aaPredicted RBP21.17■□□□□ 0.98
DKC1-201ENST00000369550 PTMSP20962 102 aa21.16■□□□□ 0.98
DKC1-201ENST00000369550 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
DKC1-201ENST00000369550 SMC5Q8IY18 1101 aa21.16■□□□□ 0.98
DKC1-201ENST00000369550 SNX21Q969T3 373 aa21.16■□□□□ 0.98
DKC1-201ENST00000369550 SMC4Q9NTJ3 1288 aa21.16■□□□□ 0.98
DKC1-201ENST00000369550 ERVK-7P63135 1459 aa21.16■□□□□ 0.98
DKC1-201ENST00000369550 RBM25P49756 843 aaKnown RBP21.15■□□□□ 0.98
DKC1-201ENST00000369550 RAB3GAP1Q15042 981 aa21.15■□□□□ 0.98
DKC1-201ENST00000369550 FOXD4L1Q9NU39 408 aa21.15■□□□□ 0.98
DKC1-201ENST00000369550 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
DKC1-201ENST00000369550 CCDC173Q0VFZ6 552 aa21.14■□□□□ 0.98
DKC1-201ENST00000369550 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.98
DKC1-201ENST00000369550 NASPP49321 788 aaPredicted RBP21.14■□□□□ 0.97
DKC1-201ENST00000369550 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
DKC1-201ENST00000369550 POGZQ7Z3K3 1410 aa21.14■□□□□ 0.97
DKC1-201ENST00000369550 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
DKC1-201ENST00000369550 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
DKC1-201ENST00000369550 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
DKC1-201ENST00000369550 TRIM27P14373 513 aa21.12■□□□□ 0.97
DKC1-201ENST00000369550 MSNP26038 577 aaKnown RBP21.12■□□□□ 0.97
DKC1-201ENST00000369550 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
DKC1-201ENST00000369550 GOLGA6L22H0YM25 854 aa21.11■□□□□ 0.97
DKC1-201ENST00000369550 TSR2Q969E8 191 aaKnown RBP21.11■□□□□ 0.97
DKC1-201ENST00000369550 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
DKC1-201ENST00000369550 MTHFSP49914 203 aa21.1■□□□□ 0.97
DKC1-201ENST00000369550 MLH3Q9UHC1 1453 aa21.1■□□□□ 0.97
DKC1-201ENST00000369550 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
DKC1-201ENST00000369550 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
DKC1-201ENST00000369550 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.975e-13■■■■■ 27.1
DKC1-201ENST00000369550 LNPKQ9C0E8 428 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms