RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
CKS1B-202ENST00000368436 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
CKS1B-202ENST00000368436 CDK12Q9NYV4 1490 aaPredicted RBP23.86■■□□□ 1.41
CKS1B-202ENST00000368436 PIK3C2GO75747 1445 aa23.85■■□□□ 1.41
CKS1B-202ENST00000368436 ABCC11Q96J66 1382 aa23.84■■□□□ 1.41
CKS1B-202ENST00000368436 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
CKS1B-202ENST00000368436 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
CKS1B-202ENST00000368436 STK26Q9P289 416 aa23.82■■□□□ 1.4
CKS1B-202ENST00000368436 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
CKS1B-202ENST00000368436 WAPLQ7Z5K2 1190 aa23.81■■□□□ 1.4
CKS1B-202ENST00000368436 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
CKS1B-202ENST00000368436 UPF1Q92900 1129 aaKnown RBP eCLIP23.79■■□□□ 1.4
CKS1B-202ENST00000368436 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
CKS1B-202ENST00000368436 QTRT2Q9H974 415 aaKnown RBP23.78■■□□□ 1.4
CKS1B-202ENST00000368436 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
CKS1B-202ENST00000368436 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
CKS1B-202ENST00000368436 PXDNQ92626 1479 aa23.77■■□□□ 1.4
CKS1B-202ENST00000368436 ADAMTS2O95450 1211 aa23.77■■□□□ 1.4
CKS1B-202ENST00000368436 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
CKS1B-202ENST00000368436 NPHP3Q7Z494 1330 aa23.77■■□□□ 1.4
CKS1B-202ENST00000368436 FMN2Q9NZ56 1722 aa23.76■■□□□ 1.39
CKS1B-202ENST00000368436 NGLY1Q96IV0 654 aa23.76■■□□□ 1.39
CKS1B-202ENST00000368436 C14orf93Q9H972 538 aaKnown RBP23.76■■□□□ 1.39
CKS1B-202ENST00000368436 MYOM2P54296 1465 aa23.75■■□□□ 1.39
CKS1B-202ENST00000368436 RBM6P78332 1123 aaKnown RBP23.75■■□□□ 1.39
CKS1B-202ENST00000368436 RAB3GAP2Q9H2M9 1393 aa23.74■■□□□ 1.39
CKS1B-202ENST00000368436 FOXO3O43524 673 aa23.73■■□□□ 1.39
CKS1B-202ENST00000368436 RGS12O14924 1447 aa23.72■■□□□ 1.39
CKS1B-202ENST00000368436 MARF1Q9Y4F3 1742 aaKnown RBP23.72■■□□□ 1.39
CKS1B-202ENST00000368436 FNBP4Q8N3X1 1017 aaPredicted RBP23.71■■□□□ 1.39
CKS1B-202ENST00000368436 KIF1AQ12756 1690 aa23.7■■□□□ 1.39
CKS1B-202ENST00000368436 NUTM2FA1L443 756 aa23.7■■□□□ 1.38
CKS1B-202ENST00000368436 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
CKS1B-202ENST00000368436 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
CKS1B-202ENST00000368436 USP21Q9UK80 565 aa23.69■■□□□ 1.38
CKS1B-202ENST00000368436 RGPD8O14715 1765 aaPredicted RBP23.69■■□□□ 1.38
CKS1B-202ENST00000368436 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
CKS1B-202ENST00000368436 TRPC5Q9UL62 973 aaPredicted RBP23.66■■□□□ 1.38
CKS1B-202ENST00000368436 ATRNO75882 1429 aa23.64■■□□□ 1.37
CKS1B-202ENST00000368436 DLC1Q96QB1 1528 aa23.64■■□□□ 1.37
CKS1B-202ENST00000368436 SPATA31A3Q5VYP0 1347 aa23.62■■□□□ 1.37
CKS1B-202ENST00000368436 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
CKS1B-202ENST00000368436 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
CKS1B-202ENST00000368436 KRT28Q7Z3Y7 464 aa23.6■■□□□ 1.37
CKS1B-202ENST00000368436 PRAM1Q96QH2 718 aa23.6■■□□□ 1.37
CKS1B-202ENST00000368436 HRCP23327 699 aa23.59■■□□□ 1.37
CKS1B-202ENST00000368436 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
CKS1B-202ENST00000368436 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.59■■□□□ 1.37
CKS1B-202ENST00000368436 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
CKS1B-202ENST00000368436 USP32Q8NFA0 1604 aa23.57■■□□□ 1.36
CKS1B-202ENST00000368436 SAFB2Q14151 953 aaKnown RBP eCLIP23.56■■□□□ 1.36
CKS1B-202ENST00000368436 POGKQ9P215 609 aa23.55■■□□□ 1.36
CKS1B-202ENST00000368436 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 TNS3Q68CZ2 1445 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 ANKARQ7Z5J8 1434 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 PSME1Q06323 249 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 SLIT2O94813 1529 aa23.54■■□□□ 1.36
CKS1B-202ENST00000368436 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
CKS1B-202ENST00000368436 DCAF11Q8TEB1 546 aa23.53■■□□□ 1.36
CKS1B-202ENST00000368436 GJD4Q96KN9 370 aaPredicted RBP23.52■■□□□ 1.36
CKS1B-202ENST00000368436 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
CKS1B-202ENST00000368436 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
CKS1B-202ENST00000368436 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
CKS1B-202ENST00000368436 UNC5CLQ8IV45 518 aa23.5■■□□□ 1.35
CKS1B-202ENST00000368436 GLI3P10071 1580 aa23.48■■□□□ 1.35
CKS1B-202ENST00000368436 TRPM3Q9HCF6 1732 aaPredicted RBP23.47■■□□□ 1.35
CKS1B-202ENST00000368436 PMFBP1Q8TBY8 1022 aa23.47■■□□□ 1.35
CKS1B-202ENST00000368436 ARHGEF10O15013 1369 aa23.47■■□□□ 1.35
CKS1B-202ENST00000368436 CABLES1Q8TDN4 633 aa23.46■■□□□ 1.35
CKS1B-202ENST00000368436 NWD2Q9ULI1 1742 aa23.46■■□□□ 1.35
CKS1B-202ENST00000368436 PLCH1Q4KWH8 1693 aa23.45■■□□□ 1.34
CKS1B-202ENST00000368436 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
CKS1B-202ENST00000368436 RALGAPBQ86X10 1494 aa23.45■■□□□ 1.34
CKS1B-202ENST00000368436 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
CKS1B-202ENST00000368436 MINK1Q8N4C8 1332 aaPredicted RBP23.45■■□□□ 1.34
CKS1B-202ENST00000368436 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
CKS1B-202ENST00000368436 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
CKS1B-202ENST00000368436 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
CKS1B-202ENST00000368436 WASLO00401 505 aaPredicted RBP23.43■■□□□ 1.34
CKS1B-202ENST00000368436 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
CKS1B-202ENST00000368436 ALS2Q96Q42 1657 aa23.43■■□□□ 1.34
CKS1B-202ENST00000368436 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
CKS1B-202ENST00000368436 BRWD3Q6RI45 1802 aa23.4■■□□□ 1.34
CKS1B-202ENST00000368436 VPS72Q15906 364 aa23.4■■□□□ 1.34
CKS1B-202ENST00000368436 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
CKS1B-202ENST00000368436 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
CKS1B-202ENST00000368436 GPRASP1Q5JY77 1395 aa23.39■■□□□ 1.33
CKS1B-202ENST00000368436 ITSN1Q15811 1721 aa23.38■■□□□ 1.33
CKS1B-202ENST00000368436 FAM83GA6ND36 823 aa23.37■■□□□ 1.33
CKS1B-202ENST00000368436 PLEKHG5O94827 1062 aa23.37■■□□□ 1.33
CKS1B-202ENST00000368436 NRAPQ86VF7 1730 aa23.36■■□□□ 1.33
CKS1B-202ENST00000368436 CRYBG1Q9Y4K1 1723 aa23.36■■□□□ 1.33
CKS1B-202ENST00000368436 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
CKS1B-202ENST00000368436 EP400Q96L91 3159 aa23.34■■□□□ 1.33
CKS1B-202ENST00000368436 ATP7BP35670 1465 aa23.34■■□□□ 1.33
CKS1B-202ENST00000368436 COL14A1Q05707 1796 aaKnown RBP23.33■■□□□ 1.33
CKS1B-202ENST00000368436 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
CKS1B-202ENST00000368436 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
CKS1B-202ENST00000368436 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms