RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 PPP4R3BQ5MIZ7 849 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 WNT2BQ93097 391 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 VPS9D1Q9Y2B5 631 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 ZCCHC11Q5TAX3 1644 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-205ENST00000368295 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
ECHDC1-205ENST00000368295 EVI5O60447 810 aa5.63□□□□□ -1.51
ECHDC1-205ENST00000368295 YY1P25490 414 aa5.63□□□□□ -1.51
ECHDC1-205ENST00000368295 SLC4A5Q9BY07 1137 aa5.63□□□□□ -1.51
ECHDC1-205ENST00000368295 KIAA0556O60303 1618 aa5.62□□□□□ -1.51
ECHDC1-205ENST00000368295 UACAQ9BZF9 1416 aa5.62□□□□□ -1.51
ECHDC1-205ENST00000368295 KDM5BQ9UGL1 1544 aa5.62□□□□□ -1.51
ECHDC1-205ENST00000368295 LMOD2Q6P5Q4 547 aa5.62□□□□□ -1.51
ECHDC1-205ENST00000368295 ANO8Q9HCE9 1232 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-205ENST00000368295 ARHGEF40Q8TER5 1519 aa5.61□□□□□ -1.51
ECHDC1-205ENST00000368295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-205ENST00000368295 TNIKQ9UKE5 1360 aa5.6□□□□□ -1.51
ECHDC1-205ENST00000368295 UHRF1BP1LA0JNW5 1464 aa5.6□□□□□ -1.51
ECHDC1-205ENST00000368295 MLLT3P42568 568 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-205ENST00000368295 CAMSAP1Q5T5Y3 1602 aa5.59□□□□□ -1.51
ECHDC1-205ENST00000368295 POGZQ7Z3K3 1410 aa5.59□□□□□ -1.51
ECHDC1-205ENST00000368295 FANCAO15360 1455 aa5.59□□□□□ -1.52
ECHDC1-205ENST00000368295 KCNC4Q03721 635 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 TRIM26Q12899 539 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 NYAP1Q6ZVC0 841 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 GRXCR2A6NFK2 248 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 BHMG1C9JSJ3 638 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 TREML4Q6UXN2 200 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 KCNK17Q96T54 332 aa5.58□□□□□ -1.52
ECHDC1-205ENST00000368295 ARID3CA6NKF2 412 aa5.57□□□□□ -1.52
ECHDC1-205ENST00000368295 MRPL50Q8N5N7 158 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-205ENST00000368295 EPAS1Q99814 870 aa5.57□□□□□ -1.52
ECHDC1-205ENST00000368295 PHF14O94880 888 aa5.56□□□□□ -1.52
ECHDC1-205ENST00000368295 DDX12PQ92771 950 aa5.56□□□□□ -1.52
ECHDC1-205ENST00000368295 PSMG3-AS1Q96PY0 264 aa5.56□□□□□ -1.52
ECHDC1-205ENST00000368295 ARHGEF12Q9NZN5 1544 aa5.56□□□□□ -1.52
ECHDC1-205ENST00000368295 LRRC7Q96NW7 1537 aa5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 BTBD11A6QL63 1104 aa5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 TYW1BQ6NUM6 668 aa5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 GPIHBP1Q8IV16 184 aa5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 SUPT5HO00267 1087 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 RBM26Q5T8P6 1007 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 AKNAQ7Z591 1439 aa5.55□□□□□ -1.52
ECHDC1-205ENST00000368295 PTPRKQ15262 1439 aa5.54□□□□□ -1.52
ECHDC1-205ENST00000368295 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
ECHDC1-205ENST00000368295 OSBPP22059 807 aa5.54□□□□□ -1.52
ECHDC1-205ENST00000368295 FBXW7Q969H0 707 aa5.54□□□□□ -1.52
ECHDC1-205ENST00000368295 NBPF3Q9H094 633 aa5.54□□□□□ -1.52
ECHDC1-205ENST00000368295 FOSBP53539 338 aa5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 ERICH3Q5RHP9 1530 aa5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 CEP350Q5VT06 3117 aa5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 INSM1Q01101 510 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 EN1Q05925 392 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 ZNF454Q8N9F8 522 aa5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 ZC3H15Q8WU90 426 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 PCDHGA10Q9Y5H3 936 aa5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 V9GY48 417 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-205ENST00000368295 NUTM2FA1L443 756 aa5.52□□□□□ -1.53
ECHDC1-205ENST00000368295 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-205ENST00000368295 SHANK2Q9UPX8 1470 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 NUTM2BA6NNL0 878 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 NUTM2EB1AL46 878 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 RXRBP28702 533 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 NUTM2DQ5VT03 806 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 NUTM2AQ8IVF1 878 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 ZFYVE16Q7Z3T8 1539 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 MAP3K7O43318 606 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 FCHSD2O94868 740 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 ZDHHC16Q969W1 377 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 PRKD2Q9BZL6 878 aa5.51□□□□□ -1.53
ECHDC1-205ENST00000368295 CARMIL2Q6F5E8 1435 aa5.5□□□□□ -1.53
ECHDC1-205ENST00000368295 SETD1BQ9UPS6 1966 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-205ENST00000368295 PRIM1P49642 420 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-205ENST00000368295 ANKK1Q8NFD2 765 aa5.5□□□□□ -1.53
ECHDC1-205ENST00000368295 TRAPPC8Q9Y2L5 1435 aa5.5□□□□□ -1.53
ECHDC1-205ENST00000368295 CPS1P31327 1500 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 C3P01024 1663 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 UBTFP17480 764 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 HRCP23327 699 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 RGS12O14924 1447 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 LRP6O75581 1613 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 DISP1Q96F81 1524 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 GPR37O15354 613 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 C1QTNF8P60827 252 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 PDZRN3Q9UPQ7 1066 aa5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 DENND4BO75064 1496 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-205ENST00000368295 WRNQ14191 1432 aaPredicted RBP eCLIP5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 ZMYND10O75800 440 aa5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 HMGB1P09429 215 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 BARGINQ6ZT62 677 aa5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 RAPGEF6Q8TEU7 1601 aa5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 TCOF1Q13428 1488 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 RICTORQ6R327 1708 aa5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 LRP5O75197 1615 aa5.48□□□□□ -1.53
ECHDC1-205ENST00000368295 ADAM33Q9BZ11 813 aa5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 CDHR5Q9HBB8 845 aa5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 NEO1Q92859 1461 aa5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 PHLDB1Q86UU1 1377 aa5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 HIC1Q14526 733 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms