RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 STK26Q9P289 416 aa12.15□□□□□ -0.46
RNU4-59P-201ENST00000364447 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
RNU4-59P-201ENST00000364447 PIK3C2GO75747 1445 aa12.14□□□□□ -0.47
RNU4-59P-201ENST00000364447 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
RNU4-59P-201ENST00000364447 SOS2Q07890 1332 aaPredicted RBP12.13□□□□□ -0.47
RNU4-59P-201ENST00000364447 TECPR2O15040 1411 aa12.13□□□□□ -0.47
RNU4-59P-201ENST00000364447 COL22A1Q8NFW1 1626 aaPredicted RBP12.13□□□□□ -0.47
RNU4-59P-201ENST00000364447 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
RNU4-59P-201ENST00000364447 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
RNU4-59P-201ENST00000364447 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
RNU4-59P-201ENST00000364447 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
RNU4-59P-201ENST00000364447 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
RNU4-59P-201ENST00000364447 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
RNU4-59P-201ENST00000364447 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
RNU4-59P-201ENST00000364447 PXDNQ92626 1479 aa12.1□□□□□ -0.47
RNU4-59P-201ENST00000364447 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
RNU4-59P-201ENST00000364447 RGS12O14924 1447 aa12.1□□□□□ -0.47
RNU4-59P-201ENST00000364447 MYOM2P54296 1465 aa12.09□□□□□ -0.47
RNU4-59P-201ENST00000364447 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
RNU4-59P-201ENST00000364447 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
RNU4-59P-201ENST00000364447 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNU4-59P-201ENST00000364447 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
RNU4-59P-201ENST00000364447 FOXO3O43524 673 aa12.08□□□□□ -0.48
RNU4-59P-201ENST00000364447 XPCQ01831 940 aaPredicted RBP12.08□□□□□ -0.48
RNU4-59P-201ENST00000364447 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.48
RNU4-59P-201ENST00000364447 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
RNU4-59P-201ENST00000364447 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
RNU4-59P-201ENST00000364447 USP21Q9UK80 565 aa12.07□□□□□ -0.48
RNU4-59P-201ENST00000364447 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
RNU4-59P-201ENST00000364447 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
RNU4-59P-201ENST00000364447 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
RNU4-59P-201ENST00000364447 FNBP4Q8N3X1 1017 aaPredicted RBP12.04□□□□□ -0.48
RNU4-59P-201ENST00000364447 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
RNU4-59P-201ENST00000364447 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
RNU4-59P-201ENST00000364447 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
RNU4-59P-201ENST00000364447 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
RNU4-59P-201ENST00000364447 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
RNU4-59P-201ENST00000364447 ATRNO75882 1429 aa12.03□□□□□ -0.48
RNU4-59P-201ENST00000364447 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
RNU4-59P-201ENST00000364447 POGKQ9P215 609 aa12.02□□□□□ -0.49
RNU4-59P-201ENST00000364447 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
RNU4-59P-201ENST00000364447 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
RNU4-59P-201ENST00000364447 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
RNU4-59P-201ENST00000364447 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
RNU4-59P-201ENST00000364447 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
RNU4-59P-201ENST00000364447 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
RNU4-59P-201ENST00000364447 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
RNU4-59P-201ENST00000364447 PSME1Q06323 249 aa12□□□□□ -0.49
RNU4-59P-201ENST00000364447 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
RNU4-59P-201ENST00000364447 ANKARQ7Z5J8 1434 aa12□□□□□ -0.49
RNU4-59P-201ENST00000364447 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
RNU4-59P-201ENST00000364447 ABCA3Q99758 1704 aa12□□□□□ -0.49
RNU4-59P-201ENST00000364447 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
RNU4-59P-201ENST00000364447 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
RNU4-59P-201ENST00000364447 PLCH1Q4KWH8 1693 aa11.99□□□□□ -0.49
RNU4-59P-201ENST00000364447 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
RNU4-59P-201ENST00000364447 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
RNU4-59P-201ENST00000364447 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
RNU4-59P-201ENST00000364447 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
RNU4-59P-201ENST00000364447 SBNO1A3KN83 1393 aa11.97□□□□□ -0.49
RNU4-59P-201ENST00000364447 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
RNU4-59P-201ENST00000364447 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
RNU4-59P-201ENST00000364447 ARHGEF28Q8N1W1 1705 aaKnown RBP11.97□□□□□ -0.49
RNU4-59P-201ENST00000364447 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
RNU4-59P-201ENST00000364447 SLIT2O94813 1529 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
RNU4-59P-201ENST00000364447 GLI3P10071 1580 aa11.96□□□□□ -0.5
RNU4-59P-201ENST00000364447 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
RNU4-59P-201ENST00000364447 TRPM3Q9HCF6 1732 aaPredicted RBP11.95□□□□□ -0.5
RNU4-59P-201ENST00000364447 HRCP23327 699 aa11.95□□□□□ -0.5
RNU4-59P-201ENST00000364447 CABLES1Q8TDN4 633 aa11.95□□□□□ -0.5
RNU4-59P-201ENST00000364447 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
RNU4-59P-201ENST00000364447 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
RNU4-59P-201ENST00000364447 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
RNU4-59P-201ENST00000364447 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
RNU4-59P-201ENST00000364447 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
RNU4-59P-201ENST00000364447 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
RNU4-59P-201ENST00000364447 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
RNU4-59P-201ENST00000364447 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
RNU4-59P-201ENST00000364447 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
RNU4-59P-201ENST00000364447 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.5
RNU4-59P-201ENST00000364447 VPS72Q15906 364 aa11.9□□□□□ -0.5
RNU4-59P-201ENST00000364447 NRAPQ86VF7 1730 aa11.9□□□□□ -0.5
RNU4-59P-201ENST00000364447 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
RNU4-59P-201ENST00000364447 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
RNU4-59P-201ENST00000364447 ATP7BP35670 1465 aa11.89□□□□□ -0.51
RNU4-59P-201ENST00000364447 EP400Q96L91 3159 aa11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
RNU4-59P-201ENST00000364447 A0A0G2JS52 829 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms