RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 RABEP1Q15276 862 aa21.77■■□□□ 1.08
SMG5-201ENST00000361813 ABCC5O15440 1437 aa21.77■■□□□ 1.08
SMG5-201ENST00000361813 AMPHP49418 695 aa21.77■■□□□ 1.08
SMG5-201ENST00000361813 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
SMG5-201ENST00000361813 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.07
SMG5-201ENST00000361813 GOLGA6L19H0YKK7 550 aa21.76■■□□□ 1.07
SMG5-201ENST00000361813 ZNF771Q7L3S4 317 aaPredicted RBP21.76■■□□□ 1.07
SMG5-201ENST00000361813 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
SMG5-201ENST00000361813 TNNT3P45378 269 aaPredicted RBP21.75■■□□□ 1.07
SMG5-201ENST00000361813 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
SMG5-201ENST00000361813 DIAPH3Q9NSV4 1193 aa21.75■■□□□ 1.07
SMG5-201ENST00000361813 BECN2A8MW95 431 aa21.75■■□□□ 1.07
SMG5-201ENST00000361813 CHD1LQ86WJ1 897 aa21.75■■□□□ 1.07
SMG5-201ENST00000361813 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMG5-201ENST00000361813 GCC1Q96CN9 775 aa21.74■■□□□ 1.07
SMG5-201ENST00000361813 CIZ1Q9ULV3 898 aaPredicted RBP21.74■■□□□ 1.07
SMG5-201ENST00000361813 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
SMG5-201ENST00000361813 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
SMG5-201ENST00000361813 SMC3Q9UQE7 1217 aa21.73■■□□□ 1.07
SMG5-201ENST00000361813 MBD3O95983 291 aa21.73■■□□□ 1.07
SMG5-201ENST00000361813 TPM4P67936 248 aa21.73■■□□□ 1.07
SMG5-201ENST00000361813 NESP48681 1621 aa21.73■■□□□ 1.07
SMG5-201ENST00000361813 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
SMG5-201ENST00000361813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.72■■□□□ 1.07
SMG5-201ENST00000361813 H3BQV1 296 aa21.72■■□□□ 1.07
SMG5-201ENST00000361813 IFFO2Q5TF58 517 aa21.72■■□□□ 1.07
SMG5-201ENST00000361813 FKBP5Q13451 457 aaPredicted RBP21.72■■□□□ 1.07
SMG5-201ENST00000361813 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
SMG5-201ENST00000361813 C8orf34Q49A92 452 aa21.71■■□□□ 1.07
SMG5-201ENST00000361813 SF3A1Q15459 793 aaKnown RBP21.71■■□□□ 1.07
SMG5-201ENST00000361813 MTERF4Q7Z6M4 381 aaKnown RBP21.71■■□□□ 1.07
SMG5-201ENST00000361813 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
SMG5-201ENST00000361813 HECW1Q76N89 1606 aa21.7■■□□□ 1.06
SMG5-201ENST00000361813 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
SMG5-201ENST00000361813 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
SMG5-201ENST00000361813 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
SMG5-201ENST00000361813 HDAC5Q9UQL6 1122 aa21.69■■□□□ 1.06
SMG5-201ENST00000361813 ZKSCAN1P17029 563 aaPredicted RBP21.69■■□□□ 1.06
SMG5-201ENST00000361813 ZSCAN30Q86W11 494 aa21.69■■□□□ 1.06
SMG5-201ENST00000361813 FAM184AQ8NB25 1140 aa21.68■■□□□ 1.06
SMG5-201ENST00000361813 IFT57Q9NWB7 429 aa21.68■■□□□ 1.06
SMG5-201ENST00000361813 TSPY26PQ9H489 355 aa21.68■■□□□ 1.06
SMG5-201ENST00000361813 TWISTNBQ3B726 338 aaPredicted RBP21.68■■□□□ 1.06
SMG5-201ENST00000361813 BICD2Q8TD16 824 aa21.68■■□□□ 1.06
SMG5-201ENST00000361813 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
SMG5-201ENST00000361813 CCDC27Q2M243 656 aa21.67■■□□□ 1.06
SMG5-201ENST00000361813 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
SMG5-201ENST00000361813 TBC1D32Q96NH3 1257 aa21.66■■□□□ 1.06
SMG5-201ENST00000361813 RUFY2Q8WXA3 655 aa21.66■■□□□ 1.06
SMG5-201ENST00000361813 PLEKHH2Q8IVE3 1493 aa21.66■■□□□ 1.06
SMG5-201ENST00000361813 CCDC9Q9Y3X0 531 aaKnown RBP21.66■■□□□ 1.06
SMG5-201ENST00000361813 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
SMG5-201ENST00000361813 PANK2Q9BZ23 570 aa21.65■■□□□ 1.06
SMG5-201ENST00000361813 UQCRHLA0A096LP55 91 aa21.65■■□□□ 1.06
SMG5-201ENST00000361813 UQCRHP07919 91 aa21.65■■□□□ 1.06
SMG5-201ENST00000361813 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMG5-201ENST00000361813 UBE2Q2Q8WVN8 375 aa21.65■■□□□ 1.06
SMG5-201ENST00000361813 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
SMG5-201ENST00000361813 GRIN2BQ13224 1484 aa21.64■■□□□ 1.06
SMG5-201ENST00000361813 SSH1Q8WYL5 1049 aa21.64■■□□□ 1.06
SMG5-201ENST00000361813 CWC22Q9HCG8 908 aaKnown RBP21.64■■□□□ 1.05
SMG5-201ENST00000361813 KIF3AQ9Y496 699 aa21.64■■□□□ 1.05
SMG5-201ENST00000361813 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
SMG5-201ENST00000361813 TSPYL4Q9UJ04 414 aa21.63■■□□□ 1.05
SMG5-201ENST00000361813 FIBPO43427 364 aa21.62■■□□□ 1.05
SMG5-201ENST00000361813 GORABQ5T7V8 394 aa21.62■■□□□ 1.05
SMG5-201ENST00000361813 DISP3Q9P2K9 1392 aa21.62■■□□□ 1.05
SMG5-201ENST00000361813 SSFA2P28290 1259 aa21.61■■□□□ 1.05
SMG5-201ENST00000361813 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
SMG5-201ENST00000361813 HMGN5P82970 282 aaKnown RBP21.6■■□□□ 1.05
SMG5-201ENST00000361813 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
SMG5-201ENST00000361813 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
SMG5-201ENST00000361813 SASS6Q6UVJ0 657 aa21.6■■□□□ 1.05
SMG5-201ENST00000361813 CCAR2Q8N163 923 aaKnown RBP21.6■■□□□ 1.05
SMG5-201ENST00000361813 FBXW7Q969H0 707 aa21.6■■□□□ 1.05
SMG5-201ENST00000361813 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
SMG5-201ENST00000361813 MCM2P49736 904 aa21.59■■□□□ 1.05
SMG5-201ENST00000361813 PCDHB15Q9Y5E8 787 aa21.59■■□□□ 1.05
SMG5-201ENST00000361813 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
SMG5-201ENST00000361813 C9orf78Q9NZ63 289 aaPredicted RBP21.59■■□□□ 1.05
SMG5-201ENST00000361813 SYCE3A1L190 88 aa21.58■■□□□ 1.05
SMG5-201ENST00000361813 ERC2O15083 957 aa21.58■■□□□ 1.05
SMG5-201ENST00000361813 SPC24Q8NBT2 197 aa21.58■■□□□ 1.05
SMG5-201ENST00000361813 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.05
SMG5-201ENST00000361813 TULP1O00294 542 aaPredicted RBP21.58■■□□□ 1.04
SMG5-201ENST00000361813 SEC24BO95487 1268 aa21.57■■□□□ 1.04
SMG5-201ENST00000361813 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
SMG5-201ENST00000361813 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
SMG5-201ENST00000361813 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.56■■□□□ 1.04
SMG5-201ENST00000361813 NSD3Q9BZ95 1437 aa21.56■■□□□ 1.04
SMG5-201ENST00000361813 A0A0U1RQG5 324 aaPredicted RBP21.55■■□□□ 1.04
SMG5-201ENST00000361813 HOMER1Q86YM7 354 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 TRIM5Q9C035 493 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 TRIM27P14373 513 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 CREBRFQ8IUR6 639 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 CLCN1P35523 988 aa21.55■■□□□ 1.04
SMG5-201ENST00000361813 THUMPD2Q9BTF0 503 aaKnown RBP21.55■■□□□ 1.04
SMG5-201ENST00000361813 FOSBP53539 338 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms