RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 TBX22Q9Y458 520 aa28.76■■■□□ 2.19
MAP1LC3A-201ENST00000360668 FAM135BQ49AJ0 1406 aa28.75■■■□□ 2.19
MAP1LC3A-201ENST00000360668 KTN1Q86UP2 1357 aaKnown RBP28.73■■■□□ 2.19
MAP1LC3A-201ENST00000360668 SAFB2Q14151 953 aaKnown RBP eCLIP28.73■■■□□ 2.19
MAP1LC3A-201ENST00000360668 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
MAP1LC3A-201ENST00000360668 ILDR1Q86SU0 546 aaPredicted RBP28.7■■■□□ 2.18
MAP1LC3A-201ENST00000360668 SLC26A8Q96RN1 970 aa28.7■■■□□ 2.18
MAP1LC3A-201ENST00000360668 MINK1Q8N4C8 1332 aaPredicted RBP28.68■■■□□ 2.18
MAP1LC3A-201ENST00000360668 PLEKHH1Q9ULM0 1364 aa28.67■■■□□ 2.18
MAP1LC3A-201ENST00000360668 WAPLQ7Z5K2 1190 aa28.67■■■□□ 2.18
MAP1LC3A-201ENST00000360668 PTPRUQ92729 1446 aa28.66■■■□□ 2.18
MAP1LC3A-201ENST00000360668 RALBP1Q15311 655 aa28.66■■■□□ 2.18
MAP1LC3A-201ENST00000360668 PIK3R4Q99570 1358 aa28.65■■■□□ 2.18
MAP1LC3A-201ENST00000360668 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
MAP1LC3A-201ENST00000360668 NINLQ9Y2I6 1382 aa28.64■■■□□ 2.17
MAP1LC3A-201ENST00000360668 KNSTRNQ9Y448 316 aa28.63■■■□□ 2.17
MAP1LC3A-201ENST00000360668 ATAD2Q6PL18 1390 aa28.63■■■□□ 2.17
MAP1LC3A-201ENST00000360668 ROBO2Q9HCK4 1378 aa28.63■■■□□ 2.17
MAP1LC3A-201ENST00000360668 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
MAP1LC3A-201ENST00000360668 CABP2Q9NPB3 220 aa28.62■■■□□ 2.17
MAP1LC3A-201ENST00000360668 PARD3Q8TEW0 1356 aa28.61■■■□□ 2.17
MAP1LC3A-201ENST00000360668 PTCH1Q13635 1447 aa28.61■■■□□ 2.17
MAP1LC3A-201ENST00000360668 SRPK2P78362 688 aaKnown RBP28.61■■■□□ 2.17
MAP1LC3A-201ENST00000360668 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
MAP1LC3A-201ENST00000360668 XRN1Q8IZH2 1706 aaKnown RBP28.59■■■□□ 2.17
MAP1LC3A-201ENST00000360668 TMC1Q8TDI8 760 aa28.59■■■□□ 2.17
MAP1LC3A-201ENST00000360668 FBXO41Q8TF61 875 aa28.59■■■□□ 2.17
MAP1LC3A-201ENST00000360668 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
MAP1LC3A-201ENST00000360668 AMOTL2Q9Y2J4 779 aa28.59■■■□□ 2.17
MAP1LC3A-201ENST00000360668 SLC12A5Q9H2X9 1139 aa28.58■■■□□ 2.17
MAP1LC3A-201ENST00000360668 NPHP4O75161 1426 aaPredicted RBP28.57■■■□□ 2.16
MAP1LC3A-201ENST00000360668 CNGB1Q14028 1251 aaPredicted RBP28.57■■■□□ 2.16
MAP1LC3A-201ENST00000360668 AMER1Q5JTC6 1135 aaPredicted RBP28.57■■■□□ 2.16
MAP1LC3A-201ENST00000360668 ADGRB2O60241 1585 aa28.56■■■□□ 2.16
MAP1LC3A-201ENST00000360668 MYBBP1AQ9BQG0 1328 aaKnown RBP28.56■■■□□ 2.16
MAP1LC3A-201ENST00000360668 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
MAP1LC3A-201ENST00000360668 ANKRD36BQ8N2N9 1353 aa28.55■■■□□ 2.16
MAP1LC3A-201ENST00000360668 LTBP4Q8N2S1 1624 aa28.54■■■□□ 2.16
MAP1LC3A-201ENST00000360668 WASLO00401 505 aaPredicted RBP28.54■■■□□ 2.16
MAP1LC3A-201ENST00000360668 CARD14Q9BXL6 1004 aa28.54■■■□□ 2.16
MAP1LC3A-201ENST00000360668 CC2D1BQ5T0F9 858 aaKnown RBP28.53■■■□□ 2.16
MAP1LC3A-201ENST00000360668 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.52■■■□□ 2.16
MAP1LC3A-201ENST00000360668 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
MAP1LC3A-201ENST00000360668 CCDC184Q52MB2 194 aa28.52■■■□□ 2.16
MAP1LC3A-201ENST00000360668 MRS2Q9HD23 443 aa28.52■■■□□ 2.16
MAP1LC3A-201ENST00000360668 USP32Q8NFA0 1604 aa28.51■■■□□ 2.15
MAP1LC3A-201ENST00000360668 NSD3Q9BZ95 1437 aa28.49■■■□□ 2.15
MAP1LC3A-201ENST00000360668 BRD4O60885 1362 aaPredicted RBP28.48■■■□□ 2.15
MAP1LC3A-201ENST00000360668 NLRP13Q86W25 1043 aa28.45■■■□□ 2.15
MAP1LC3A-201ENST00000360668 KCNA6P17658 529 aa28.45■■■□□ 2.14
MAP1LC3A-201ENST00000360668 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.14
MAP1LC3A-201ENST00000360668 CD163L1Q9NR16 1453 aa28.44■■■□□ 2.14
MAP1LC3A-201ENST00000360668 A0A1W2PP64 1363 aa28.43■■■□□ 2.14
MAP1LC3A-201ENST00000360668 ATP7BP35670 1465 aa28.43■■■□□ 2.14
MAP1LC3A-201ENST00000360668 NUDT16Q96DE0 195 aaKnown RBP28.41■■■□□ 2.14
MAP1LC3A-201ENST00000360668 CABP1Q9NZU7 370 aa28.41■■■□□ 2.14
MAP1LC3A-201ENST00000360668 CGNL1Q0VF96 1302 aa28.4■■■□□ 2.14
MAP1LC3A-201ENST00000360668 HDGFL2Q7Z4V5 671 aaPredicted RBP28.4■■■□□ 2.14
MAP1LC3A-201ENST00000360668 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
MAP1LC3A-201ENST00000360668 NSD2O96028 1365 aa28.38■■■□□ 2.13
MAP1LC3A-201ENST00000360668 CCDC61Q9Y6R9 512 aa28.38■■■□□ 2.13
MAP1LC3A-201ENST00000360668 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
MAP1LC3A-201ENST00000360668 IQSEC2Q5JU85 1478 aa28.37■■■□□ 2.13
MAP1LC3A-201ENST00000360668 TOPAZ1Q8N9V7 1692 aa28.35■■■□□ 2.13
MAP1LC3A-201ENST00000360668 PPP2R1AP30153 589 aa28.34■■■□□ 2.13
MAP1LC3A-201ENST00000360668 PRR36Q9H6K5 1346 aa28.34■■■□□ 2.13
MAP1LC3A-201ENST00000360668 CDC42BPGQ6DT37 1551 aa28.34■■■□□ 2.13
MAP1LC3A-201ENST00000360668 CPSF1Q10570 1443 aaKnown RBP28.34■■■□□ 2.13
MAP1LC3A-201ENST00000360668 FAM9BQ8IZU0 186 aa28.33■■■□□ 2.12
MAP1LC3A-201ENST00000360668 PNISRQ8TF01 805 aaKnown RBP28.33■■■□□ 2.12
MAP1LC3A-201ENST00000360668 MORC1Q86VD1 984 aa28.28■■■□□ 2.12
MAP1LC3A-201ENST00000360668 ITSN1Q15811 1721 aa28.28■■■□□ 2.12
MAP1LC3A-201ENST00000360668 AKAP12Q02952 1782 aa28.28■■■□□ 2.12
MAP1LC3A-201ENST00000360668 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
MAP1LC3A-201ENST00000360668 ANKARQ7Z5J8 1434 aa28.28■■■□□ 2.12
MAP1LC3A-201ENST00000360668 PLEKHG3A1L390 1219 aa28.27■■■□□ 2.12
MAP1LC3A-201ENST00000360668 MON2Q7Z3U7 1717 aa28.27■■■□□ 2.12
MAP1LC3A-201ENST00000360668 FMN2Q9NZ56 1722 aa28.27■■■□□ 2.12
MAP1LC3A-201ENST00000360668 ANKRD26Q9UPS8 1709 aa28.27■■■□□ 2.12
MAP1LC3A-201ENST00000360668 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.12
MAP1LC3A-201ENST00000360668 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.11
MAP1LC3A-201ENST00000360668 ZNF692Q9BU19 519 aaPredicted RBP28.25■■■□□ 2.11
MAP1LC3A-201ENST00000360668 KIF20BQ96Q89 1820 aa28.25■■■□□ 2.11
MAP1LC3A-201ENST00000360668 ADGRL3Q9HAR2 1447 aa28.25■■■□□ 2.11
MAP1LC3A-201ENST00000360668 FYB1O15117 783 aa28.22■■■□□ 2.11
MAP1LC3A-201ENST00000360668 HNRNPUQ00839 825 aaKnown RBP eCLIP28.21■■■□□ 2.11
MAP1LC3A-201ENST00000360668 NUTM2FA1L443 756 aa28.2■■■□□ 2.1
MAP1LC3A-201ENST00000360668 UBAP1LF5GYI3 381 aa28.2■■■□□ 2.1
MAP1LC3A-201ENST00000360668 STRCP1A6NGW2 1772 aa28.19■■■□□ 2.1
MAP1LC3A-201ENST00000360668 INSRP06213 1382 aa28.19■■■□□ 2.1
MAP1LC3A-201ENST00000360668 RGPD8O14715 1765 aaPredicted RBP28.18■■■□□ 2.1
MAP1LC3A-201ENST00000360668 LRRC7Q96NW7 1537 aa28.18■■■□□ 2.1
MAP1LC3A-201ENST00000360668 ACEP12821 1306 aa28.18■■■□□ 2.1
MAP1LC3A-201ENST00000360668 GGNBP2Q9H3C7 697 aa28.17■■■□□ 2.1
MAP1LC3A-201ENST00000360668 PROSER2Q86WR7 435 aaPredicted RBP28.16■■■□□ 2.1
MAP1LC3A-201ENST00000360668 NRKQ7Z2Y5 1582 aa28.15■■■□□ 2.1
MAP1LC3A-201ENST00000360668 POLR3AO14802 1390 aaPredicted RBP28.15■■■□□ 2.1
MAP1LC3A-201ENST00000360668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.14■■■□□ 2.1
MAP1LC3A-201ENST00000360668 USP6P35125 1406 aa28.13■■■□□ 2.09
MAP1LC3A-201ENST00000360668 RBM33Q96EV2 1170 aaKnown RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms