RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NOB1Q9ULX3 412 aaKnown RBP20.15■□□□□ 0.82
SCAF1-201ENST00000360565 DRC7Q8IY82 874 aa20.15■□□□□ 0.82
SCAF1-201ENST00000360565 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
SCAF1-201ENST00000360565 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
SCAF1-201ENST00000360565 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
SCAF1-201ENST00000360565 NUP153P49790 1475 aaKnown RBP20.13■□□□□ 0.81
SCAF1-201ENST00000360565 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
SCAF1-201ENST00000360565 C1orf115Q9H7X2 142 aa20.13■□□□□ 0.81
SCAF1-201ENST00000360565 TXNDC2Q86VQ3 553 aa20.12■□□□□ 0.81
SCAF1-201ENST00000360565 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
SCAF1-201ENST00000360565 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
SCAF1-201ENST00000360565 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
SCAF1-201ENST00000360565 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
SCAF1-201ENST00000360565 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
SCAF1-201ENST00000360565 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
SCAF1-201ENST00000360565 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
SCAF1-201ENST00000360565 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
SCAF1-201ENST00000360565 ANO2Q9NQ90 1003 aa20.1■□□□□ 0.81
SCAF1-201ENST00000360565 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
SCAF1-201ENST00000360565 GOLGA6L6A8MZA4 724 aa20.09■□□□□ 0.81
SCAF1-201ENST00000360565 GORABQ5T7V8 394 aa20.09■□□□□ 0.81
SCAF1-201ENST00000360565 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
SCAF1-201ENST00000360565 INTS3Q68E01 1043 aaKnown RBP20.08■□□□□ 0.81
SCAF1-201ENST00000360565 NRDCO43847 1150 aa20.08■□□□□ 0.81
SCAF1-201ENST00000360565 NPHP1O15259 732 aa20.08■□□□□ 0.8
SCAF1-201ENST00000360565 NLRP6P59044 892 aa20.08■□□□□ 0.8
SCAF1-201ENST00000360565 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.8
SCAF1-201ENST00000360565 TMPOP42166 694 aaKnown RBP20.07■□□□□ 0.8
SCAF1-201ENST00000360565 ATP10BO94823 1461 aa20.06■□□□□ 0.8
SCAF1-201ENST00000360565 CDC45O75419 566 aa20.06■□□□□ 0.8
SCAF1-201ENST00000360565 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
SCAF1-201ENST00000360565 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
SCAF1-201ENST00000360565 NINLQ9Y2I6 1382 aa20.06■□□□□ 0.8
SCAF1-201ENST00000360565 HSP90B1P14625 803 aaKnown RBP20.05■□□□□ 0.8
SCAF1-201ENST00000360565 SULT6B1Q6IMI4 303 aa20.05■□□□□ 0.8
SCAF1-201ENST00000360565 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
SCAF1-201ENST00000360565 DIAPH3Q9NSV4 1193 aa20.05■□□□□ 0.8
SCAF1-201ENST00000360565 RARSP54136 660 aaKnown RBP20.05■□□□□ 0.8
SCAF1-201ENST00000360565 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
SCAF1-201ENST00000360565 PSME1Q06323 249 aa20.03■□□□□ 0.8
SCAF1-201ENST00000360565 GNL2Q13823 731 aaKnown RBP20.03■□□□□ 0.8
SCAF1-201ENST00000360565 HTATSF1O43719 755 aaKnown RBP20.03■□□□□ 0.8
SCAF1-201ENST00000360565 TAF7LQ5H9L4 462 aa20.03■□□□□ 0.8
SCAF1-201ENST00000360565 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
SCAF1-201ENST00000360565 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.8
SCAF1-201ENST00000360565 ATAD2Q6PL18 1390 aa20.02■□□□□ 0.8
SCAF1-201ENST00000360565 BRPF3Q9ULD4 1205 aa20.02■□□□□ 0.8
SCAF1-201ENST00000360565 CTTNBP2Q8WZ74 1663 aa20.02■□□□□ 0.8
SCAF1-201ENST00000360565 GCC1Q96CN9 775 aa20.01■□□□□ 0.79
SCAF1-201ENST00000360565 CSPP1Q1MSJ5 1256 aa20.01■□□□□ 0.79
SCAF1-201ENST00000360565 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
SCAF1-201ENST00000360565 FCHSD2O94868 740 aa20■□□□□ 0.79
SCAF1-201ENST00000360565 PHF14O94880 888 aa20■□□□□ 0.79
SCAF1-201ENST00000360565 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
SCAF1-201ENST00000360565 ARID3AQ99856 593 aa20■□□□□ 0.79
SCAF1-201ENST00000360565 SCAF11Q99590 1463 aaKnown RBP20■□□□□ 0.79
SCAF1-201ENST00000360565 NUCB2P80303 420 aa20■□□□□ 0.79
SCAF1-201ENST00000360565 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
SCAF1-201ENST00000360565 TRAK2O60296 914 aa19.99■□□□□ 0.79
SCAF1-201ENST00000360565 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
SCAF1-201ENST00000360565 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
SCAF1-201ENST00000360565 NEXNQ0ZGT2 675 aa19.99■□□□□ 0.79
SCAF1-201ENST00000360565 AMER1Q5JTC6 1135 aaPredicted RBP19.98■□□□□ 0.79
SCAF1-201ENST00000360565 MCTP1Q6DN14 999 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 IFIT2P09913 472 aaKnown RBP19.98■□□□□ 0.79
SCAF1-201ENST00000360565 RUFY2Q8WXA3 655 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 TESK2Q96S53 571 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
SCAF1-201ENST00000360565 UBTFL1P0CB47 393 aaPredicted RBP19.97■□□□□ 0.79
SCAF1-201ENST00000360565 IDI1Q13907 227 aa19.97■□□□□ 0.79
SCAF1-201ENST00000360565 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
SCAF1-201ENST00000360565 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
SCAF1-201ENST00000360565 ATP6V1DQ9Y5K8 247 aa19.96■□□□□ 0.79
SCAF1-201ENST00000360565 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
SCAF1-201ENST00000360565 LRPPRCP42704 1394 aaKnown RBP19.96■□□□□ 0.79
SCAF1-201ENST00000360565 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
SCAF1-201ENST00000360565 CHD1LQ86WJ1 897 aa19.96■□□□□ 0.79
SCAF1-201ENST00000360565 PRAG1Q86YV5 1406 aa19.96■□□□□ 0.79
SCAF1-201ENST00000360565 WDR62O43379 1518 aa19.95■□□□□ 0.78
SCAF1-201ENST00000360565 GNAI3P08754 354 aa19.95■□□□□ 0.78
SCAF1-201ENST00000360565 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
SCAF1-201ENST00000360565 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
SCAF1-201ENST00000360565 ABTB2Q8N961 1025 aa19.94■□□□□ 0.78
SCAF1-201ENST00000360565 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
SCAF1-201ENST00000360565 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
SCAF1-201ENST00000360565 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
SCAF1-201ENST00000360565 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
SCAF1-201ENST00000360565 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
SCAF1-201ENST00000360565 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
SCAF1-201ENST00000360565 CDK11BP21127 795 aaKnown RBP19.93■□□□□ 0.78
SCAF1-201ENST00000360565 NOS1P29475 1434 aa19.93■□□□□ 0.78
SCAF1-201ENST00000360565 SURF6O75683 361 aaKnown RBP19.93■□□□□ 0.78
SCAF1-201ENST00000360565 TTC5Q8N0Z6 440 aa19.93■□□□□ 0.78
SCAF1-201ENST00000360565 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
SCAF1-201ENST00000360565 DDX58O95786 925 aaKnown RBP19.92■□□□□ 0.78
SCAF1-201ENST00000360565 G3BP1Q13283 466 aaKnown RBP eCLIP19.92■□□□□ 0.781e-6■■□□□ 13.5
SCAF1-201ENST00000360565 NEK4P51957 841 aa19.92■□□□□ 0.78
SCAF1-201ENST00000360565 ZNF428Q96B54 188 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms