RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 THEMISQ8N1K5 641 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-201ENST00000360171 PANK3Q9H999 370 aa27.31■■□□□ 1.96
CBWD3-201ENST00000360171 PER1O15534 1290 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-201ENST00000360171 MSH5O43196 834 aa27.29■■□□□ 1.96
CBWD3-201ENST00000360171 SAFB2Q14151 953 aaKnown RBP eCLIP27.29■■□□□ 1.96
CBWD3-201ENST00000360171 CNGB1Q14028 1251 aaPredicted RBP27.29■■□□□ 1.96
CBWD3-201ENST00000360171 PRAM1Q96QH2 718 aa27.29■■□□□ 1.96
CBWD3-201ENST00000360171 EID1Q9Y6B2 187 aa27.28■■□□□ 1.96
CBWD3-201ENST00000360171 MED14O60244 1454 aa27.28■■□□□ 1.96
CBWD3-201ENST00000360171 ABCC11Q96J66 1382 aa27.27■■□□□ 1.96
CBWD3-201ENST00000360171 RNF123Q5XPI4 1314 aa27.26■■□□□ 1.95
CBWD3-201ENST00000360171 KTN1Q86UP2 1357 aaKnown RBP27.25■■□□□ 1.95
CBWD3-201ENST00000360171 CPS1P31327 1500 aa27.25■■□□□ 1.95
CBWD3-201ENST00000360171 POGKQ9P215 609 aa27.24■■□□□ 1.95
CBWD3-201ENST00000360171 NUDCQ9Y266 331 aa27.23■■□□□ 1.95
CBWD3-201ENST00000360171 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
CBWD3-201ENST00000360171 TECPR2O15040 1411 aa27.23■■□□□ 1.95
CBWD3-201ENST00000360171 EVC2Q86UK5 1308 aa27.22■■□□□ 1.95
CBWD3-201ENST00000360171 MINK1Q8N4C8 1332 aaPredicted RBP27.21■■□□□ 1.95
CBWD3-201ENST00000360171 WAPLQ7Z5K2 1190 aa27.2■■□□□ 1.94
CBWD3-201ENST00000360171 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
CBWD3-201ENST00000360171 SLC26A8Q96RN1 970 aa27.19■■□□□ 1.94
CBWD3-201ENST00000360171 B4GALNT3Q6L9W6 998 aa27.17■■□□□ 1.94
CBWD3-201ENST00000360171 PTPRUQ92729 1446 aa27.17■■□□□ 1.94
CBWD3-201ENST00000360171 PARD3Q8TEW0 1356 aa27.16■■□□□ 1.94
CBWD3-201ENST00000360171 PNISRQ8TF01 805 aaKnown RBP27.16■■□□□ 1.94
CBWD3-201ENST00000360171 CABP2Q9NPB3 220 aa27.16■■□□□ 1.94
CBWD3-201ENST00000360171 FAM135BQ49AJ0 1406 aa27.15■■□□□ 1.94
CBWD3-201ENST00000360171 PUS7Q96PZ0 661 aaKnown RBP27.15■■□□□ 1.94
CBWD3-201ENST00000360171 BRD4O60885 1362 aaPredicted RBP27.14■■□□□ 1.93
CBWD3-201ENST00000360171 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
CBWD3-201ENST00000360171 RALBP1Q15311 655 aa27.12■■□□□ 1.93
CBWD3-201ENST00000360171 CC2D1BQ5T0F9 858 aaKnown RBP27.12■■□□□ 1.93
CBWD3-201ENST00000360171 TBX22Q9Y458 520 aa27.12■■□□□ 1.93
CBWD3-201ENST00000360171 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
CBWD3-201ENST00000360171 KNSTRNQ9Y448 316 aa27.11■■□□□ 1.93
CBWD3-201ENST00000360171 TMC1Q8TDI8 760 aa27.11■■□□□ 1.93
CBWD3-201ENST00000360171 SIRT1Q96EB6 747 aa27.11■■□□□ 1.93
CBWD3-201ENST00000360171 CARD14Q9BXL6 1004 aa27.11■■□□□ 1.93
CBWD3-201ENST00000360171 XRN1Q8IZH2 1706 aaKnown RBP27.1■■□□□ 1.93
CBWD3-201ENST00000360171 AMER1Q5JTC6 1135 aaPredicted RBP27.1■■□□□ 1.93
CBWD3-201ENST00000360171 SRPK2P78362 688 aaKnown RBP27.09■■□□□ 1.93
CBWD3-201ENST00000360171 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.09■■□□□ 1.93
CBWD3-201ENST00000360171 MYBBP1AQ9BQG0 1328 aaKnown RBP27.09■■□□□ 1.93
CBWD3-201ENST00000360171 ANKLE2Q86XL3 938 aa27.08■■□□□ 1.93
CBWD3-201ENST00000360171 CDK19Q9BWU1 502 aa27.07■■□□□ 1.92
CBWD3-201ENST00000360171 ERICH6Q7L0X2 663 aa27.07■■□□□ 1.92
CBWD3-201ENST00000360171 ATAD2Q6PL18 1390 aa27.05■■□□□ 1.92
CBWD3-201ENST00000360171 ADGRB2O60241 1585 aa27.04■■□□□ 1.92
CBWD3-201ENST00000360171 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
CBWD3-201ENST00000360171 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
CBWD3-201ENST00000360171 NSD3Q9BZ95 1437 aa27.04■■□□□ 1.92
CBWD3-201ENST00000360171 AMOTL2Q9Y2J4 779 aa27.04■■□□□ 1.92
CBWD3-201ENST00000360171 CHD2O14647 1828 aaKnown RBP27.03■■□□□ 1.92
CBWD3-201ENST00000360171 PTCH1Q13635 1447 aa27.03■■□□□ 1.92
CBWD3-201ENST00000360171 ANKRD36BQ8N2N9 1353 aa27.03■■□□□ 1.92
CBWD3-201ENST00000360171 NINLQ9Y2I6 1382 aa27.02■■□□□ 1.92
CBWD3-201ENST00000360171 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
CBWD3-201ENST00000360171 KDM4FA0A1W2PPD8 638 aa26.99■■□□□ 1.91
CBWD3-201ENST00000360171 WASLO00401 505 aaPredicted RBP26.99■■□□□ 1.91
CBWD3-201ENST00000360171 PIK3R4Q99570 1358 aa26.99■■□□□ 1.91
CBWD3-201ENST00000360171 A0A1W2PP64 1363 aa26.98■■□□□ 1.91
CBWD3-201ENST00000360171 NPHP4O75161 1426 aaPredicted RBP26.98■■□□□ 1.91
CBWD3-201ENST00000360171 NLRP13Q86W25 1043 aa26.97■■□□□ 1.91
CBWD3-201ENST00000360171 CCDC136Q96JN2 1154 aa26.96■■□□□ 1.91
CBWD3-201ENST00000360171 INSRP06213 1382 aa26.94■■□□□ 1.9
CBWD3-201ENST00000360171 NCKAP5LQ9HCH0 1330 aa26.94■■□□□ 1.9
CBWD3-201ENST00000360171 ATP7BP35670 1465 aa26.93■■□□□ 1.9
CBWD3-201ENST00000360171 KCNA6P17658 529 aa26.92■■□□□ 1.9
CBWD3-201ENST00000360171 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
CBWD3-201ENST00000360171 CABP1Q9NZU7 370 aa26.92■■□□□ 1.9
CBWD3-201ENST00000360171 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
CBWD3-201ENST00000360171 PPIP5K1Q6PFW1 1433 aa26.89■■□□□ 1.9
CBWD3-201ENST00000360171 PRR36Q9H6K5 1346 aa26.89■■□□□ 1.9
CBWD3-201ENST00000360171 PDE3BQ13370 1112 aa26.89■■□□□ 1.9
CBWD3-201ENST00000360171 NUDT16Q96DE0 195 aaKnown RBP26.88■■□□□ 1.89
CBWD3-201ENST00000360171 TERF2IPQ9NYB0 399 aa26.88■■□□□ 1.89
CBWD3-201ENST00000360171 ANKRD26Q9UPS8 1709 aa26.88■■□□□ 1.89
CBWD3-201ENST00000360171 KIF20BQ96Q89 1820 aa26.87■■□□□ 1.89
CBWD3-201ENST00000360171 AKAP12Q02952 1782 aa26.87■■□□□ 1.89
CBWD3-201ENST00000360171 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
CBWD3-201ENST00000360171 CDC42BPGQ6DT37 1551 aa26.87■■□□□ 1.89
CBWD3-201ENST00000360171 CGNL1Q0VF96 1302 aa26.87■■□□□ 1.89
CBWD3-201ENST00000360171 NALCNQ8IZF0 1738 aa26.86■■□□□ 1.89
CBWD3-201ENST00000360171 MON2Q7Z3U7 1717 aa26.85■■□□□ 1.89
CBWD3-201ENST00000360171 RGPD8O14715 1765 aaPredicted RBP26.85■■□□□ 1.89
CBWD3-201ENST00000360171 BCL11AQ9H165 835 aa26.84■■□□□ 1.89
CBWD3-201ENST00000360171 NWD1Q149M9 1564 aa26.84■■□□□ 1.89
CBWD3-201ENST00000360171 HDGFL2Q7Z4V5 671 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-201ENST00000360171 CPSF1Q10570 1443 aaKnown RBP26.83■■□□□ 1.89
CBWD3-201ENST00000360171 RRP1P56182 461 aaKnown RBP26.82■■□□□ 1.88
CBWD3-201ENST00000360171 CCDC61Q9Y6R9 512 aa26.82■■□□□ 1.88
CBWD3-201ENST00000360171 NSD2O96028 1365 aa26.82■■□□□ 1.88
CBWD3-201ENST00000360171 NOP58Q9Y2X3 529 aaKnown RBP26.82■■□□□ 1.88
CBWD3-201ENST00000360171 LMTK3Q96Q04 1460 aa26.82■■□□□ 1.88
CBWD3-201ENST00000360171 FMN2Q9NZ56 1722 aa26.81■■□□□ 1.88
CBWD3-201ENST00000360171 HSPA2P54652 639 aa26.8■■□□□ 1.88
CBWD3-201ENST00000360171 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
CBWD3-201ENST00000360171 NKTRP30414 1462 aaKnown RBP26.79■■□□□ 1.88
CBWD3-201ENST00000360171 NUTM2FA1L443 756 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms