RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 ALKQ9UM73 1620 aa26.86■■□□□ 1.89
BRD4-202ENST00000360016 CDCA7LQ96GN5 454 aa26.86■■□□□ 1.89
BRD4-202ENST00000360016 YTHDC2Q9H6S0 1430 aaKnown RBP26.86■■□□□ 1.89
BRD4-202ENST00000360016 SAFB2Q14151 953 aaKnown RBP eCLIP26.85■■□□□ 1.89
BRD4-202ENST00000360016 PTPRMP28827 1452 aa26.85■■□□□ 1.89
BRD4-202ENST00000360016 USP32Q8NFA0 1604 aa26.83■■□□□ 1.89
BRD4-202ENST00000360016 ESF1Q9H501 851 aaKnown RBP26.82■■□□□ 1.88
BRD4-202ENST00000360016 CABP2Q9NPB3 220 aa26.82■■□□□ 1.88
BRD4-202ENST00000360016 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
BRD4-202ENST00000360016 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
BRD4-202ENST00000360016 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
BRD4-202ENST00000360016 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
BRD4-202ENST00000360016 RIMS2Q9UQ26 1411 aa26.8■■□□□ 1.88
BRD4-202ENST00000360016 PRAM1Q96QH2 718 aa26.8■■□□□ 1.88
BRD4-202ENST00000360016 POGKQ9P215 609 aa26.78■■□□□ 1.88
BRD4-202ENST00000360016 CGNL1Q0VF96 1302 aa26.78■■□□□ 1.88
BRD4-202ENST00000360016 POLR3AO14802 1390 aaPredicted RBP26.77■■□□□ 1.88
BRD4-202ENST00000360016 RRP1P56182 461 aaKnown RBP26.77■■□□□ 1.88
BRD4-202ENST00000360016 PLEKHH1Q9ULM0 1364 aa26.76■■□□□ 1.87
BRD4-202ENST00000360016 SRPK2P78362 688 aaKnown RBP26.76■■□□□ 1.87
BRD4-202ENST00000360016 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
BRD4-202ENST00000360016 MINK1Q8N4C8 1332 aaPredicted RBP26.75■■□□□ 1.87
BRD4-202ENST00000360016 ZNF521Q96K83 1311 aa26.73■■□□□ 1.87
BRD4-202ENST00000360016 CCDC146Q8IYE0 955 aa26.72■■□□□ 1.87
BRD4-202ENST00000360016 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
BRD4-202ENST00000360016 TNNT2P45379 298 aaPredicted RBP26.71■■□□□ 1.87
BRD4-202ENST00000360016 NPM2Q86SE8 214 aaKnown RBP26.71■■□□□ 1.87
BRD4-202ENST00000360016 NSD2O96028 1365 aa26.71■■□□□ 1.87
BRD4-202ENST00000360016 SETD1AO15047 1707 aaKnown RBP26.71■■□□□ 1.87
BRD4-202ENST00000360016 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.69■■□□□ 1.863e-9■□□□□ 8.7
BRD4-202ENST00000360016 DLC1Q96QB1 1528 aa26.69■■□□□ 1.86
BRD4-202ENST00000360016 A0A1W2PP64 1363 aa26.68■■□□□ 1.86
BRD4-202ENST00000360016 TNRQ92752 1358 aa26.67■■□□□ 1.86
BRD4-202ENST00000360016 APAF1O14727 1248 aa26.67■■□□□ 1.86
BRD4-202ENST00000360016 GOLGA2Q08379 1002 aa26.67■■□□□ 1.86
BRD4-202ENST00000360016 SHPRHQ149N8 1683 aa26.66■■□□□ 1.86
BRD4-202ENST00000360016 NRXN3Q9Y4C0 1643 aa26.65■■□□□ 1.86
BRD4-202ENST00000360016 ABCC11Q96J66 1382 aa26.65■■□□□ 1.86
BRD4-202ENST00000360016 CCDC136Q96JN2 1154 aa26.65■■□□□ 1.86
BRD4-202ENST00000360016 CDK19Q9BWU1 502 aa26.65■■□□□ 1.86
BRD4-202ENST00000360016 DUSP27Q5VZP5 1158 aa26.64■■□□□ 1.86
BRD4-202ENST00000360016 TERF2IPQ9NYB0 399 aa26.64■■□□□ 1.85
BRD4-202ENST00000360016 MTHFSP49914 203 aa26.63■■□□□ 1.85
BRD4-202ENST00000360016 HDGFP51858 240 aaKnown RBP26.62■■□□□ 1.85
BRD4-202ENST00000360016 CD163L1Q9NR16 1453 aa26.62■■□□□ 1.85
BRD4-202ENST00000360016 WAPLQ7Z5K2 1190 aa26.61■■□□□ 1.85
BRD4-202ENST00000360016 NGEFQ8N5V2 710 aa26.61■■□□□ 1.85
BRD4-202ENST00000360016 RTN4Q9NQC3 1192 aaKnown RBP26.61■■□□□ 1.85
BRD4-202ENST00000360016 SLFN5Q08AF3 891 aa26.6■■□□□ 1.85
BRD4-202ENST00000360016 CFAP53Q96M91 514 aa26.6■■□□□ 1.85
BRD4-202ENST00000360016 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
BRD4-202ENST00000360016 METP08581 1390 aa26.58■■□□□ 1.85
BRD4-202ENST00000360016 UBR1Q8IWV7 1749 aa26.58■■□□□ 1.85
BRD4-202ENST00000360016 TRMT2AQ8IZ69 625 aaKnown RBP26.57■■□□□ 1.84
BRD4-202ENST00000360016 HDGFL2Q7Z4V5 671 aaPredicted RBP26.56■■□□□ 1.84
BRD4-202ENST00000360016 CABP1Q9NZU7 370 aa26.56■■□□□ 1.84
BRD4-202ENST00000360016 TMEM2Q9UHN6 1383 aa26.55■■□□□ 1.84
BRD4-202ENST00000360016 GGNBP2Q9H3C7 697 aa26.55■■□□□ 1.84
BRD4-202ENST00000360016 PLIN1O60240 522 aa26.54■■□□□ 1.84
BRD4-202ENST00000360016 FYB1O15117 783 aa26.54■■□□□ 1.84
BRD4-202ENST00000360016 MED14O60244 1454 aa26.54■■□□□ 1.84
BRD4-202ENST00000360016 ANKRD26Q9UPS8 1709 aa26.53■■□□□ 1.84
BRD4-202ENST00000360016 PAK3O75914 559 aaPredicted RBP26.53■■□□□ 1.84
BRD4-202ENST00000360016 DEKP35659 375 aaKnown RBP26.53■■□□□ 1.84
BRD4-202ENST00000360016 RUNDC1Q96C34 613 aa26.53■■□□□ 1.84
BRD4-202ENST00000360016 SPINK5Q9NQ38 1064 aaPredicted RBP26.52■■□□□ 1.84
BRD4-202ENST00000360016 NLRP1Q9C000 1473 aa26.52■■□□□ 1.84
BRD4-202ENST00000360016 E9PSI1 815 aa26.51■■□□□ 1.83
BRD4-202ENST00000360016 KNDC1Q76NI1 1749 aa26.5■■□□□ 1.83
BRD4-202ENST00000360016 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
BRD4-202ENST00000360016 SIRT1Q96EB6 747 aa26.49■■□□□ 1.83
BRD4-202ENST00000360016 TECPR2O15040 1411 aa26.49■■□□□ 1.83
BRD4-202ENST00000360016 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
BRD4-202ENST00000360016 WWC1Q8IX03 1113 aa26.48■■□□□ 1.83
BRD4-202ENST00000360016 ATP7BP35670 1465 aa26.48■■□□□ 1.83
BRD4-202ENST00000360016 NKTRP30414 1462 aaKnown RBP26.47■■□□□ 1.83
BRD4-202ENST00000360016 IQSEC2Q5JU85 1478 aa26.47■■□□□ 1.83
BRD4-202ENST00000360016 WASLO00401 505 aaPredicted RBP26.47■■□□□ 1.83
BRD4-202ENST00000360016 CEBPAP49715 358 aaPredicted RBP26.47■■□□□ 1.83
BRD4-202ENST00000360016 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
BRD4-202ENST00000360016 TCP11L2Q8N4U5 519 aa26.46■■□□□ 1.83
BRD4-202ENST00000360016 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
BRD4-202ENST00000360016 CPS1P31327 1500 aa26.45■■□□□ 1.82
BRD4-202ENST00000360016 CRBNQ96SW2 442 aa26.44■■□□□ 1.82
BRD4-202ENST00000360016 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
BRD4-202ENST00000360016 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
BRD4-202ENST00000360016 ADAMTS13Q76LX8 1427 aa26.43■■□□□ 1.82
BRD4-202ENST00000360016 C3P01024 1663 aa26.42■■□□□ 1.82
BRD4-202ENST00000360016 NEUROD2Q15784 382 aa26.42■■□□□ 1.82
BRD4-202ENST00000360016 RRP7AQ9Y3A4 280 aaKnown RBP26.42■■□□□ 1.82
BRD4-202ENST00000360016 COL3A1P02461 1466 aaPredicted RBP26.41■■□□□ 1.82
BRD4-202ENST00000360016 LTKP29376 864 aa26.41■■□□□ 1.82
BRD4-202ENST00000360016 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
BRD4-202ENST00000360016 PLEKHG1Q9ULL1 1385 aa26.41■■□□□ 1.82
BRD4-202ENST00000360016 C20orf194Q5TEA3 1177 aa26.41■■□□□ 1.82
BRD4-202ENST00000360016 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.4■■□□□ 1.82
BRD4-202ENST00000360016 PPIP5K1Q6PFW1 1433 aa26.4■■□□□ 1.82
BRD4-202ENST00000360016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.39■■□□□ 1.82
BRD4-202ENST00000360016 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.81
BRD4-202ENST00000360016 CCDC27Q2M243 656 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms