RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 BCL2L12Q9HB09 334 aa5.67□□□□□ -1.5
CNGA1-201ENST00000358519 MADDQ8WXG6 1647 aa5.67□□□□□ -1.5
CNGA1-201ENST00000358519 NEURL4Q96JN8 1562 aa5.67□□□□□ -1.5
CNGA1-201ENST00000358519 KIAA1107Q9UPP5 1409 aa5.66□□□□□ -1.5
CNGA1-201ENST00000358519 IQSEC2Q5JU85 1478 aa5.66□□□□□ -1.5
CNGA1-201ENST00000358519 ZBED2Q9BTP6 218 aa5.65□□□□□ -1.5
CNGA1-201ENST00000358519 SALL2Q9Y467 1007 aaPredicted RBP5.65□□□□□ -1.5
CNGA1-201ENST00000358519 MTUS2Q5JR59 1369 aa5.65□□□□□ -1.5
CNGA1-201ENST00000358519 HFM1A2PYH4 1435 aa5.65□□□□□ -1.51
CNGA1-201ENST00000358519 YEATS2Q9ULM3 1422 aa5.65□□□□□ -1.51
CNGA1-201ENST00000358519 RIMS1Q86UR5 1692 aaKnown RBP5.65□□□□□ -1.51
CNGA1-201ENST00000358519 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.51
CNGA1-201ENST00000358519 DEKP35659 375 aaKnown RBP5.65□□□□□ -1.51
CNGA1-201ENST00000358519 ANKK1Q8NFD2 765 aa5.65□□□□□ -1.51
CNGA1-201ENST00000358519 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.51
CNGA1-201ENST00000358519 UBE2Q2Q8WVN8 375 aa5.64□□□□□ -1.51
CNGA1-201ENST00000358519 PTPREP23469 700 aa5.63□□□□□ -1.51
CNGA1-201ENST00000358519 RTEL1-TNFRSF6BF6WH68 1400 aa5.63□□□□□ -1.51
CNGA1-201ENST00000358519 FANCAO15360 1455 aa5.63□□□□□ -1.51
CNGA1-201ENST00000358519 UNC13BO14795 1591 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 CDC42BPBQ9Y5S2 1711 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 CCDC136Q96JN2 1154 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 PTPRTO14522 1441 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 SETD5Q9C0A6 1442 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 ATP10BO94823 1461 aa5.62□□□□□ -1.51
CNGA1-201ENST00000358519 RAPGEF3O95398 923 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 V9GY48 417 aaPredicted RBP5.61□□□□□ -1.51
CNGA1-201ENST00000358519 NEO1Q92859 1461 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 REREQ9P2R6 1566 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 ERICH6BQ5W0A0 696 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 MFRPQ9BY79 579 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 FANCIQ9NVI1 1328 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 PRKD2Q9BZL6 878 aa5.61□□□□□ -1.51
CNGA1-201ENST00000358519 ZC3H13Q5T200 1668 aaKnown RBP5.6□□□□□ -1.51
CNGA1-201ENST00000358519 UBAP1LF5GYI3 381 aa5.6□□□□□ -1.51
CNGA1-201ENST00000358519 IFNLR1Q8IU57 520 aaPredicted RBP5.6□□□□□ -1.51
CNGA1-201ENST00000358519 ZNF454Q8N9F8 522 aa5.6□□□□□ -1.51
CNGA1-201ENST00000358519 DEPDC5O75140 1603 aa5.6□□□□□ -1.51
CNGA1-201ENST00000358519 GPATCH8Q9UKJ3 1502 aaKnown RBP5.6□□□□□ -1.51
CNGA1-201ENST00000358519 PREX1Q8TCU6 1659 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 UHRF1BP1Q6BDS2 1440 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 CAMSAP2Q08AD1 1489 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 MAGI2Q86UL8 1455 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 ABCC1P33527 1531 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 ITGAEP38570 1179 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 TREML4Q6UXN2 200 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 TAOK2Q9UL54 1235 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 CCDC141Q6ZP82 1450 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 ARHGEF40Q8TER5 1519 aa5.59□□□□□ -1.51
CNGA1-201ENST00000358519 SOWAHBA6NEL2 793 aa5.59□□□□□ -1.52
CNGA1-201ENST00000358519 FOXK1P85037 733 aa5.59□□□□□ -1.52
CNGA1-201ENST00000358519 PLPP6Q8IY26 295 aa5.59□□□□□ -1.52
CNGA1-201ENST00000358519 STK17AQ9UEE5 414 aa5.59□□□□□ -1.52
CNGA1-201ENST00000358519 DAPK1P53355 1430 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 ERBINQ96RT1 1412 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.58□□□□□ -1.52
CNGA1-201ENST00000358519 DUOX2Q9NRD8 1548 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 INO80Q9ULG1 1556 aaPredicted RBP5.58□□□□□ -1.52
CNGA1-201ENST00000358519 PLCH2O75038 1416 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 CDK13Q14004 1512 aaKnown RBP5.58□□□□□ -1.52
CNGA1-201ENST00000358519 IQGAP3Q86VI3 1631 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 MLECQ14165 292 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 LAPTM4BQ86VI4 370 aa5.58□□□□□ -1.52
CNGA1-201ENST00000358519 LAMC1P11047 1609 aa5.57□□□□□ -1.52
CNGA1-201ENST00000358519 TTC37Q6PGP7 1564 aa5.57□□□□□ -1.52
CNGA1-201ENST00000358519 SAMD9LQ8IVG5 1584 aa5.57□□□□□ -1.52
CNGA1-201ENST00000358519 DENND4BO75064 1496 aaPredicted RBP5.57□□□□□ -1.52
CNGA1-201ENST00000358519 RNF25Q96BH1 459 aaPredicted RBP5.57□□□□□ -1.52
CNGA1-201ENST00000358519 POLR1AO95602 1720 aaPredicted RBP5.57□□□□□ -1.52
CNGA1-201ENST00000358519 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
CNGA1-201ENST00000358519 MED1Q15648 1581 aaPredicted RBP5.57□□□□□ -1.52
CNGA1-201ENST00000358519 PLEKHD1A6NEE1 506 aa5.57□□□□□ -1.52
CNGA1-201ENST00000358519 FER1L4A9Z1Z3 1794 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 KDM5CP41229 1560 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 ZMYM4Q5VZL5 1548 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 BCAMP50895 628 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 FOSBP53539 338 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 RABGEF1Q9UJ41 708 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 PDZRN3Q9UPQ7 1066 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 ARHGEF12Q9NZN5 1544 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 ATP10AO60312 1499 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 STRCQ7RTU9 1775 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 ANKRD30AQ9BXX3 1397 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 NEFLP07196 543 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 BCL11BQ9C0K0 894 aaPredicted RBP5.56□□□□□ -1.52
CNGA1-201ENST00000358519 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.56□□□□□ -1.52
CNGA1-201ENST00000358519 LTBP4Q8N2S1 1624 aa5.56□□□□□ -1.52
CNGA1-201ENST00000358519 LMTK2Q8IWU2 1503 aa5.55□□□□□ -1.52
CNGA1-201ENST00000358519 ZFYVE16Q7Z3T8 1539 aa5.55□□□□□ -1.52
CNGA1-201ENST00000358519 NAIPQ13075 1403 aa5.55□□□□□ -1.52
CNGA1-201ENST00000358519 FRMPD1Q5SYB0 1578 aa5.54□□□□□ -1.52
CNGA1-201ENST00000358519 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
CNGA1-201ENST00000358519 ESF1Q9H501 851 aaKnown RBP5.54□□□□□ -1.52
CNGA1-201ENST00000358519 WBP1LQ9NX94 342 aa5.54□□□□□ -1.52
CNGA1-201ENST00000358519 SETD1BQ9UPS6 1966 aaKnown RBP5.54□□□□□ -1.52
CNGA1-201ENST00000358519 TOM1O60784 492 aa5.54□□□□□ -1.52
CNGA1-201ENST00000358519 EIF5BO60841 1220 aaKnown RBP5.54□□□□□ -1.52
CNGA1-201ENST00000358519 VWDEQ8N2E2 1590 aa5.54□□□□□ -1.52
CNGA1-201ENST00000358519 TET3O43151 1660 aa5.53□□□□□ -1.52
CNGA1-201ENST00000358519 MBD5Q9P267 1494 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms