RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 XRN1Q8IZH2 1706 aaKnown RBP23.46■■□□□ 1.35
TPM1-205ENST00000357980 WAPLQ7Z5K2 1190 aa23.45■■□□□ 1.34
TPM1-205ENST00000357980 ROBO2Q9HCK4 1378 aa23.44■■□□□ 1.34
TPM1-205ENST00000357980 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
TPM1-205ENST00000357980 PIK3R4Q99570 1358 aa23.42■■□□□ 1.34
TPM1-205ENST00000357980 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
TPM1-205ENST00000357980 CHD2O14647 1828 aaKnown RBP23.39■■□□□ 1.34
TPM1-205ENST00000357980 ADGRB2O60241 1585 aa23.39■■□□□ 1.34
TPM1-205ENST00000357980 NPHP4O75161 1426 aaPredicted RBP23.39■■□□□ 1.34
TPM1-205ENST00000357980 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
TPM1-205ENST00000357980 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
TPM1-205ENST00000357980 KTN1Q86UP2 1357 aaKnown RBP23.37■■□□□ 1.33
TPM1-205ENST00000357980 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
TPM1-205ENST00000357980 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
TPM1-205ENST00000357980 NINLQ9Y2I6 1382 aa23.35■■□□□ 1.33
TPM1-205ENST00000357980 SRPK2P78362 688 aaKnown RBP23.34■■□□□ 1.33
TPM1-205ENST00000357980 CDK19Q9BWU1 502 aa23.34■■□□□ 1.33
TPM1-205ENST00000357980 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
TPM1-205ENST00000357980 SLC12A5Q9H2X9 1139 aa23.33■■□□□ 1.33
TPM1-205ENST00000357980 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
TPM1-205ENST00000357980 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
TPM1-205ENST00000357980 AMER1Q5JTC6 1135 aaPredicted RBP23.31■■□□□ 1.32
TPM1-205ENST00000357980 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 KNSTRNQ9Y448 316 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 NPC1L1Q9UHC9 1359 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 WASLO00401 505 aaPredicted RBP23.31■■□□□ 1.32
TPM1-205ENST00000357980 RALBP1Q15311 655 aa23.31■■□□□ 1.32
TPM1-205ENST00000357980 ANKRD36BQ8N2N9 1353 aa23.3■■□□□ 1.32
TPM1-205ENST00000357980 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
TPM1-205ENST00000357980 KCNA6P17658 529 aa23.29■■□□□ 1.32
TPM1-205ENST00000357980 NWD1Q149M9 1564 aa23.28■■□□□ 1.32
TPM1-205ENST00000357980 CD163L1Q9NR16 1453 aa23.27■■□□□ 1.32
TPM1-205ENST00000357980 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
TPM1-205ENST00000357980 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
TPM1-205ENST00000357980 NSD3Q9BZ95 1437 aa23.26■■□□□ 1.31
TPM1-205ENST00000357980 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
TPM1-205ENST00000357980 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
TPM1-205ENST00000357980 ATP7BP35670 1465 aa23.25■■□□□ 1.31
TPM1-205ENST00000357980 A0A1W2PP64 1363 aa23.24■■□□□ 1.31
TPM1-205ENST00000357980 TOPAZ1Q8N9V7 1692 aa23.24■■□□□ 1.31
TPM1-205ENST00000357980 HSPA2P54652 639 aa23.23■■□□□ 1.31
TPM1-205ENST00000357980 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
TPM1-205ENST00000357980 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
TPM1-205ENST00000357980 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
TPM1-205ENST00000357980 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
TPM1-205ENST00000357980 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
TPM1-205ENST00000357980 PRR36Q9H6K5 1346 aa23.19■■□□□ 1.3
TPM1-205ENST00000357980 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
TPM1-205ENST00000357980 CDC42BPGQ6DT37 1551 aa23.19■■□□□ 1.3
TPM1-205ENST00000357980 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
TPM1-205ENST00000357980 TERF2IPQ9NYB0 399 aa23.19■■□□□ 1.3
TPM1-205ENST00000357980 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
TPM1-205ENST00000357980 FMN2Q9NZ56 1722 aa23.17■■□□□ 1.3
TPM1-205ENST00000357980 NLRP13Q86W25 1043 aa23.17■■□□□ 1.3
TPM1-205ENST00000357980 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
TPM1-205ENST00000357980 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
TPM1-205ENST00000357980 ITSN1Q15811 1721 aa23.16■■□□□ 1.3
TPM1-205ENST00000357980 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
TPM1-205ENST00000357980 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
TPM1-205ENST00000357980 CGNL1Q0VF96 1302 aa23.15■■□□□ 1.3
TPM1-205ENST00000357980 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
TPM1-205ENST00000357980 NSD2O96028 1365 aa23.14■■□□□ 1.29
TPM1-205ENST00000357980 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.29
TPM1-205ENST00000357980 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.29
TPM1-205ENST00000357980 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
TPM1-205ENST00000357980 KIF20BQ96Q89 1820 aa23.13■■□□□ 1.29
TPM1-205ENST00000357980 ADGRL3Q9HAR2 1447 aa23.13■■□□□ 1.29
TPM1-205ENST00000357980 ANKARQ7Z5J8 1434 aa23.11■■□□□ 1.29
TPM1-205ENST00000357980 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
TPM1-205ENST00000357980 EDC4Q6P2E9 1401 aaKnown RBP23.08■■□□□ 1.29
TPM1-205ENST00000357980 NRKQ7Z2Y5 1582 aa23.08■■□□□ 1.29
TPM1-205ENST00000357980 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.28
TPM1-205ENST00000357980 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
TPM1-205ENST00000357980 NUTM2FA1L443 756 aa23.06■■□□□ 1.28
TPM1-205ENST00000357980 RBM33Q96EV2 1170 aaKnown RBP23.06■■□□□ 1.28
TPM1-205ENST00000357980 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
TPM1-205ENST00000357980 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
TPM1-205ENST00000357980 FYB1O15117 783 aa23.04■■□□□ 1.28
TPM1-205ENST00000357980 MORC1Q86VD1 984 aa23.04■■□□□ 1.28
TPM1-205ENST00000357980 ZNF692Q9BU19 519 aaPredicted RBP23.03■■□□□ 1.28
TPM1-205ENST00000357980 POLR3AO14802 1390 aaPredicted RBP23.02■■□□□ 1.28
TPM1-205ENST00000357980 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
TPM1-205ENST00000357980 ACEP12821 1306 aa23.02■■□□□ 1.28
TPM1-205ENST00000357980 USP6P35125 1406 aa23■■□□□ 1.27
TPM1-205ENST00000357980 GGNBP2Q9H3C7 697 aa23■■□□□ 1.27
TPM1-205ENST00000357980 NCOA3Q9Y6Q9 1424 aa23■■□□□ 1.27
TPM1-205ENST00000357980 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
TPM1-205ENST00000357980 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
TPM1-205ENST00000357980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.98■■□□□ 1.27
TPM1-205ENST00000357980 TMEM94Q12767 1356 aa22.97■■□□□ 1.27
TPM1-205ENST00000357980 C14orf37Q86TY3 774 aa22.96■■□□□ 1.27
TPM1-205ENST00000357980 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
TPM1-205ENST00000357980 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
TPM1-205ENST00000357980 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.26
TPM1-205ENST00000357980 DCCP43146 1447 aa22.94■■□□□ 1.26
TPM1-205ENST00000357980 C19orf44Q9H6X5 657 aa22.94■■□□□ 1.26
TPM1-205ENST00000357980 TTC21BQ7Z4L5 1316 aa22.93■■□□□ 1.26
TPM1-205ENST00000357980 NME9Q86XW9 330 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms