RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
CD46-204ENST00000357714 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
CD46-204ENST00000357714 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
CD46-204ENST00000357714 POLR3AO14802 1390 aaPredicted RBP9.68□□□□□ -0.86
CD46-204ENST00000357714 MYO5CQ9NQX4 1742 aa9.68□□□□□ -0.86
CD46-204ENST00000357714 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
CD46-204ENST00000357714 SCAPERQ9BY12 1400 aa9.67□□□□□ -0.86
CD46-204ENST00000357714 ITPRIPQ8IWB1 547 aa9.67□□□□□ -0.86
CD46-204ENST00000357714 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
CD46-204ENST00000357714 SMC4Q9NTJ3 1288 aa9.67□□□□□ -0.86
CD46-204ENST00000357714 IQGAP3Q86VI3 1631 aa9.66□□□□□ -0.86
CD46-204ENST00000357714 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
CD46-204ENST00000357714 RNF17Q9BXT8 1623 aaKnown RBP9.66□□□□□ -0.86
CD46-204ENST00000357714 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
CD46-204ENST00000357714 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
CD46-204ENST00000357714 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.866e-10■■■□□ 18.8
CD46-204ENST00000357714 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
CD46-204ENST00000357714 MTHFSP49914 203 aa9.65□□□□□ -0.86
CD46-204ENST00000357714 GBP4Q96PP9 640 aa9.65□□□□□ -0.86
CD46-204ENST00000357714 ISY1Q9ULR0 285 aaKnown RBP9.65□□□□□ -0.86
CD46-204ENST00000357714 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
CD46-204ENST00000357714 MAST1Q9Y2H9 1570 aa9.65□□□□□ -0.87
CD46-204ENST00000357714 MADDQ8WXG6 1647 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 TNPO1Q92973 898 aaKnown RBP9.64□□□□□ -0.87
CD46-204ENST00000357714 TSR2Q969E8 191 aaKnown RBP9.64□□□□□ -0.87
CD46-204ENST00000357714 SLC12A5Q9H2X9 1139 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 PREX2Q70Z35 1606 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 DDX19BQ9UMR2 479 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 PLXNC1O60486 1568 aa9.64□□□□□ -0.87
CD46-204ENST00000357714 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
CD46-204ENST00000357714 PHF23Q9BUL5 403 aaPredicted RBP9.63□□□□□ -0.87
CD46-204ENST00000357714 SPAG9O60271 1321 aaKnown RBP9.63□□□□□ -0.87
CD46-204ENST00000357714 ADGRF5Q8IZF2 1346 aa9.63□□□□□ -0.87
CD46-204ENST00000357714 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
CD46-204ENST00000357714 CHGAP10645 457 aaKnown RBP9.63□□□□□ -0.87
CD46-204ENST00000357714 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
CD46-204ENST00000357714 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
CD46-204ENST00000357714 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
CD46-204ENST00000357714 TRIM27P14373 513 aa9.62□□□□□ -0.87
CD46-204ENST00000357714 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
CD46-204ENST00000357714 HDAC1Q13547 482 aaPredicted RBP9.62□□□□□ -0.87
CD46-204ENST00000357714 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
CD46-204ENST00000357714 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
CD46-204ENST00000357714 LNPKQ9C0E8 428 aa9.62□□□□□ -0.87
CD46-204ENST00000357714 TRAK1Q9UPV9 953 aa9.62□□□□□ -0.87
CD46-204ENST00000357714 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
CD46-204ENST00000357714 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
CD46-204ENST00000357714 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
CD46-204ENST00000357714 RTEL1-TNFRSF6BF6WH68 1400 aa9.61□□□□□ -0.87
CD46-204ENST00000357714 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
CD46-204ENST00000357714 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
CD46-204ENST00000357714 SSH1Q8WYL5 1049 aa9.61□□□□□ -0.87
CD46-204ENST00000357714 GOLGA6L22H0YM25 854 aa9.61□□□□□ -0.87
CD46-204ENST00000357714 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
CD46-204ENST00000357714 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 SNX21Q969T3 373 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 KANK1Q14678 1352 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 MYOM1P52179 1685 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 KIF3BO15066 747 aa9.6□□□□□ -0.87
CD46-204ENST00000357714 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
CD46-204ENST00000357714 NOB1Q9ULX3 412 aaKnown RBP9.6□□□□□ -0.87
CD46-204ENST00000357714 CT47B1P0C2W7 299 aaPredicted RBP9.59□□□□□ -0.87
CD46-204ENST00000357714 PTMSP20962 102 aa9.59□□□□□ -0.87
CD46-204ENST00000357714 TMEM57Q8N5G2 664 aa9.59□□□□□ -0.87
CD46-204ENST00000357714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■□□□□ 10.9
CD46-204ENST00000357714 RAB3GAP1Q15042 981 aa9.59□□□□□ -0.87
CD46-204ENST00000357714 TPM2P07951 284 aa9.59□□□□□ -0.87
CD46-204ENST00000357714 NASPP49321 788 aaPredicted RBP9.59□□□□□ -0.87
CD46-204ENST00000357714 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
CD46-204ENST00000357714 TRPM2O94759 1503 aa9.58□□□□□ -0.88
CD46-204ENST00000357714 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
CD46-204ENST00000357714 IPO8O15397 1037 aaKnown RBP9.58□□□□□ -0.88
CD46-204ENST00000357714 MSNP26038 577 aaKnown RBP9.58□□□□□ -0.88
CD46-204ENST00000357714 DDIT3P35638 169 aa9.58□□□□□ -0.88
CD46-204ENST00000357714 DDX49Q9Y6V7 483 aaKnown RBP9.58□□□□□ -0.88
CD46-204ENST00000357714 PTPRTO14522 1441 aa9.58□□□□□ -0.88
CD46-204ENST00000357714 CCDC173Q0VFZ6 552 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 ANKRD45Q5TZF3 282 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 CHD1LQ86WJ1 897 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
CD46-204ENST00000357714 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
CD46-204ENST00000357714 SSFA2P28290 1259 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 NUCB1Q02818 461 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 ZBTB40Q9NUA8 1239 aa9.57□□□□□ -0.88
CD46-204ENST00000357714 A0A0U1RQG5 324 aaPredicted RBP9.56□□□□□ -0.88
CD46-204ENST00000357714 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
CD46-204ENST00000357714 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
CD46-204ENST00000357714 TMPOP42166 694 aaKnown RBP9.56□□□□□ -0.88
CD46-204ENST00000357714 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
CD46-204ENST00000357714 ZSCAN30Q86W11 494 aa9.56□□□□□ -0.88
CD46-204ENST00000357714 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
CD46-204ENST00000357714 PLCH2O75038 1416 aa9.55□□□□□ -0.88
CD46-204ENST00000357714 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
CD46-204ENST00000357714 BMP2KLQ5H9B9 411 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms