RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
NPAS3-202ENST00000356141 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
NPAS3-202ENST00000356141 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
NPAS3-202ENST00000356141 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
NPAS3-202ENST00000356141 NEURL4Q96JN8 1562 aa23.52■■□□□ 1.36
NPAS3-202ENST00000356141 A2ML1A8K2U0 1454 aa23.51■■□□□ 1.35
NPAS3-202ENST00000356141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
NPAS3-202ENST00000356141 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
NPAS3-202ENST00000356141 CDK19Q9BWU1 502 aa23.5■■□□□ 1.35
NPAS3-202ENST00000356141 CABP1Q9NZU7 370 aa23.48■■□□□ 1.35
NPAS3-202ENST00000356141 AGLP35573 1532 aa23.47■■□□□ 1.35
NPAS3-202ENST00000356141 SETBP1Q9Y6X0 1596 aa23.47■■□□□ 1.35
NPAS3-202ENST00000356141 TULP4Q9NRJ4 1543 aa23.47■■□□□ 1.35
NPAS3-202ENST00000356141 METP08581 1390 aa23.47■■□□□ 1.35
NPAS3-202ENST00000356141 TNRQ92752 1358 aa23.47■■□□□ 1.35
NPAS3-202ENST00000356141 RRP7AQ9Y3A4 280 aaKnown RBP23.46■■□□□ 1.35
NPAS3-202ENST00000356141 LTKP29376 864 aa23.46■■□□□ 1.35
NPAS3-202ENST00000356141 PLIN1O60240 522 aa23.45■■□□□ 1.34
NPAS3-202ENST00000356141 PPM1GO15355 546 aaPredicted RBP23.44■■□□□ 1.34
NPAS3-202ENST00000356141 APAF1O14727 1248 aa23.44■■□□□ 1.34
NPAS3-202ENST00000356141 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
NPAS3-202ENST00000356141 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
NPAS3-202ENST00000356141 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
NPAS3-202ENST00000356141 MTHFSP49914 203 aa23.43■■□□□ 1.34
NPAS3-202ENST00000356141 ANP32EQ9BTT0 268 aa23.42■■□□□ 1.34
NPAS3-202ENST00000356141 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
NPAS3-202ENST00000356141 RBM33Q96EV2 1170 aaKnown RBP23.41■■□□□ 1.34
NPAS3-202ENST00000356141 PTPRMP28827 1452 aa23.4■■□□□ 1.34
NPAS3-202ENST00000356141 SBNO2Q9Y2G9 1366 aa23.4■■□□□ 1.34
NPAS3-202ENST00000356141 SMG6Q86US8 1419 aaKnown RBP23.4■■□□□ 1.34
NPAS3-202ENST00000356141 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
NPAS3-202ENST00000356141 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
NPAS3-202ENST00000356141 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
NPAS3-202ENST00000356141 MYO3AQ8NEV4 1616 aa23.37■■□□□ 1.33
NPAS3-202ENST00000356141 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
NPAS3-202ENST00000356141 ZFYVE9O95405 1425 aa23.36■■□□□ 1.33
NPAS3-202ENST00000356141 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
NPAS3-202ENST00000356141 SOX12O15370 315 aa23.35■■□□□ 1.33
NPAS3-202ENST00000356141 SPINK5Q9NQ38 1064 aaPredicted RBP23.34■■□□□ 1.33
NPAS3-202ENST00000356141 RCAN3Q9UKA8 241 aa23.34■■□□□ 1.33
NPAS3-202ENST00000356141 U2SURPO15042 1029 aaKnown RBP23.34■■□□□ 1.33
NPAS3-202ENST00000356141 TSHZ2Q9NRE2 1034 aa23.34■■□□□ 1.33
NPAS3-202ENST00000356141 ANKRD36BQ8N2N9 1353 aa23.31■■□□□ 1.32
NPAS3-202ENST00000356141 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
NPAS3-202ENST00000356141 TMEM2Q9UHN6 1383 aa23.3■■□□□ 1.32
NPAS3-202ENST00000356141 FYB1O15117 783 aa23.3■■□□□ 1.32
NPAS3-202ENST00000356141 U2AF1L5P0DN76 240 aaPredicted RBP23.3■■□□□ 1.32
NPAS3-202ENST00000356141 U2AF1Q01081 240 aaKnown RBP eCLIP23.3■■□□□ 1.32
NPAS3-202ENST00000356141 TERF2IPQ9NYB0 399 aa23.29■■□□□ 1.32
NPAS3-202ENST00000356141 HDGFL2Q7Z4V5 671 aaPredicted RBP23.29■■□□□ 1.32
NPAS3-202ENST00000356141 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
NPAS3-202ENST00000356141 PPP4R2Q9NY27 417 aa23.28■■□□□ 1.32
NPAS3-202ENST00000356141 EXOC6Q8TAG9 804 aa23.27■■□□□ 1.32
NPAS3-202ENST00000356141 NME9Q86XW9 330 aa23.26■■□□□ 1.31
NPAS3-202ENST00000356141 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
NPAS3-202ENST00000356141 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
NPAS3-202ENST00000356141 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
NPAS3-202ENST00000356141 HDGFP51858 240 aaKnown RBP23.25■■□□□ 1.31
NPAS3-202ENST00000356141 NUDT16Q96DE0 195 aaKnown RBP23.25■■□□□ 1.31
NPAS3-202ENST00000356141 RRP1P56182 461 aaKnown RBP23.24■■□□□ 1.31
NPAS3-202ENST00000356141 NPC1L1Q9UHC9 1359 aa23.24■■□□□ 1.31
NPAS3-202ENST00000356141 PMFBP1Q8TBY8 1022 aa23.24■■□□□ 1.31
NPAS3-202ENST00000356141 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
NPAS3-202ENST00000356141 CCDC136Q96JN2 1154 aa23.23■■□□□ 1.31
NPAS3-202ENST00000356141 ATAD2Q6PL18 1390 aa23.22■■□□□ 1.31
NPAS3-202ENST00000356141 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
NPAS3-202ENST00000356141 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
NPAS3-202ENST00000356141 NRXN3Q9Y4C0 1643 aa23.21■■□□□ 1.31
NPAS3-202ENST00000356141 CFAP53Q96M91 514 aa23.2■■□□□ 1.3
NPAS3-202ENST00000356141 TCP11L2Q8N4U5 519 aa23.2■■□□□ 1.3
NPAS3-202ENST00000356141 CD163L1Q9NR16 1453 aa23.2■■□□□ 1.3
NPAS3-202ENST00000356141 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
NPAS3-202ENST00000356141 PRR36Q9H6K5 1346 aa23.19■■□□□ 1.3
NPAS3-202ENST00000356141 ABCC11Q96J66 1382 aa23.19■■□□□ 1.3
NPAS3-202ENST00000356141 DUSP27Q5VZP5 1158 aa23.18■■□□□ 1.3
NPAS3-202ENST00000356141 EMILIN1Q9Y6C2 1016 aa23.18■■□□□ 1.3
NPAS3-202ENST00000356141 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
NPAS3-202ENST00000356141 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
NPAS3-202ENST00000356141 UBR1Q8IWV7 1749 aa23.17■■□□□ 1.3
NPAS3-202ENST00000356141 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
NPAS3-202ENST00000356141 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
NPAS3-202ENST00000356141 HMOX1P09601 288 aa23.15■■□□□ 1.3
NPAS3-202ENST00000356141 C3P01024 1663 aa23.15■■□□□ 1.3
NPAS3-202ENST00000356141 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.3
NPAS3-202ENST00000356141 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.3
NPAS3-202ENST00000356141 BCAR3O75815 825 aa23.14■■□□□ 1.29
NPAS3-202ENST00000356141 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-202ENST00000356141 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
NPAS3-202ENST00000356141 FER1L4A9Z1Z3 1794 aa23.13■■□□□ 1.29
NPAS3-202ENST00000356141 PTPRUQ92729 1446 aa23.13■■□□□ 1.29
NPAS3-202ENST00000356141 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
NPAS3-202ENST00000356141 CRBNQ96SW2 442 aa23.13■■□□□ 1.29
NPAS3-202ENST00000356141 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
NPAS3-202ENST00000356141 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
NPAS3-202ENST00000356141 KCNA6P17658 529 aa23.11■■□□□ 1.29
NPAS3-202ENST00000356141 SLFN5Q08AF3 891 aa23.11■■□□□ 1.29
NPAS3-202ENST00000356141 RUNDC1Q96C34 613 aa23.1■■□□□ 1.29
NPAS3-202ENST00000356141 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
NPAS3-202ENST00000356141 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
NPAS3-202ENST00000356141 PUS7Q96PZ0 661 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms