RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 SHPRHQ149N8 1683 aa24.54■■□□□ 1.52
PTPA-204ENST00000355007 IQSEC2Q5JU85 1478 aa24.54■■□□□ 1.52
PTPA-204ENST00000355007 KIAA1210Q9ULL0 1709 aa24.54■■□□□ 1.52
PTPA-204ENST00000355007 TNNQ9UQP3 1299 aa24.54■■□□□ 1.52
PTPA-204ENST00000355007 ZNF692Q9BU19 519 aaPredicted RBP24.53■■□□□ 1.52
PTPA-204ENST00000355007 TRPM2O94759 1503 aa24.53■■□□□ 1.52
PTPA-204ENST00000355007 NCOA3Q9Y6Q9 1424 aa24.53■■□□□ 1.52
PTPA-204ENST00000355007 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
PTPA-204ENST00000355007 SLC24A1O60721 1099 aa24.52■■□□□ 1.52
PTPA-204ENST00000355007 ERBB4Q15303 1308 aa24.51■■□□□ 1.51
PTPA-204ENST00000355007 ERVK-7P63135 1459 aa24.51■■□□□ 1.51
PTPA-204ENST00000355007 MFAP1P55081 439 aaKnown RBP24.51■■□□□ 1.51
PTPA-204ENST00000355007 WDR63Q8IWG1 891 aa24.51■■□□□ 1.51
PTPA-204ENST00000355007 HSCBQ8IWL3 235 aa24.51■■□□□ 1.51
PTPA-204ENST00000355007 CARD14Q9BXL6 1004 aa24.51■■□□□ 1.51
PTPA-204ENST00000355007 RUNDC1Q96C34 613 aa24.5■■□□□ 1.51
PTPA-204ENST00000355007 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
PTPA-204ENST00000355007 DDIT3P35638 169 aa24.49■■□□□ 1.51
PTPA-204ENST00000355007 MVPQ14764 893 aaKnown RBP24.49■■□□□ 1.51
PTPA-204ENST00000355007 KANK1Q14678 1352 aa24.48■■□□□ 1.51
PTPA-204ENST00000355007 FBLN2P98095 1184 aa24.48■■□□□ 1.51
PTPA-204ENST00000355007 SHROOM2Q13796 1616 aa24.47■■□□□ 1.51
PTPA-204ENST00000355007 BCL2L13Q9BXK5 485 aa24.46■■□□□ 1.51
PTPA-204ENST00000355007 TRIM44Q96DX7 344 aaPredicted RBP24.46■■□□□ 1.51
PTPA-204ENST00000355007 NEUROD2Q15784 382 aa24.45■■□□□ 1.5
PTPA-204ENST00000355007 TCP11L2Q8N4U5 519 aa24.45■■□□□ 1.5
PTPA-204ENST00000355007 CLTCL1P53675 1640 aa24.45■■□□□ 1.5
PTPA-204ENST00000355007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
PTPA-204ENST00000355007 RRP7AQ9Y3A4 280 aaKnown RBP24.44■■□□□ 1.5
PTPA-204ENST00000355007 TPM2P07951 284 aa24.44■■□□□ 1.5
PTPA-204ENST00000355007 CCDC27Q2M243 656 aa24.44■■□□□ 1.5
PTPA-204ENST00000355007 PTPRTO14522 1441 aa24.43■■□□□ 1.5
PTPA-204ENST00000355007 SNX21Q969T3 373 aa24.42■■□□□ 1.5
PTPA-204ENST00000355007 CIZ1Q9ULV3 898 aaPredicted RBP24.42■■□□□ 1.5
PTPA-204ENST00000355007 HDAC1Q13547 482 aaPredicted RBP24.41■■□□□ 1.5
PTPA-204ENST00000355007 ZKSCAN2Q63HK3 967 aa24.41■■□□□ 1.5
PTPA-204ENST00000355007 RBM25P49756 843 aaKnown RBP24.4■■□□□ 1.5
PTPA-204ENST00000355007 SKOR2Q2VWA4 1001 aaPredicted RBP24.4■■□□□ 1.5
PTPA-204ENST00000355007 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
PTPA-204ENST00000355007 PTMSP20962 102 aa24.39■■□□□ 1.5
PTPA-204ENST00000355007 TNPO1Q92973 898 aaKnown RBP24.39■■□□□ 1.5
PTPA-204ENST00000355007 GBP4Q96PP9 640 aa24.39■■□□□ 1.5
PTPA-204ENST00000355007 GAS2L3Q86XJ1 694 aa24.39■■□□□ 1.49
PTPA-204ENST00000355007 FTSJ3Q8IY81 847 aaKnown RBP24.39■■□□□ 1.49
PTPA-204ENST00000355007 DZIP1LQ8IYY4 767 aaKnown RBP24.39■■□□□ 1.49
PTPA-204ENST00000355007 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
PTPA-204ENST00000355007 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
PTPA-204ENST00000355007 MYO3AQ8NEV4 1616 aa24.36■■□□□ 1.49
PTPA-204ENST00000355007 RAB3GAP1Q15042 981 aa24.36■■□□□ 1.49
PTPA-204ENST00000355007 CT47B1P0C2W7 299 aaPredicted RBP24.35■■□□□ 1.49
PTPA-204ENST00000355007 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
PTPA-204ENST00000355007 SBNO2Q9Y2G9 1366 aa24.35■■□□□ 1.49
PTPA-204ENST00000355007 ABCA6Q8N139 1617 aa24.35■■□□□ 1.49
PTPA-204ENST00000355007 MAP3K4Q9Y6R4 1608 aa24.35■■□□□ 1.49
PTPA-204ENST00000355007 NSD3Q9BZ95 1437 aa24.33■■□□□ 1.49
PTPA-204ENST00000355007 PDCL3Q9H2J4 239 aa24.33■■□□□ 1.49
PTPA-204ENST00000355007 MYOM2P54296 1465 aa24.33■■□□□ 1.49
PTPA-204ENST00000355007 ZNF518AQ6AHZ1 1483 aa24.33■■□□□ 1.49
PTPA-204ENST00000355007 CCDC173Q0VFZ6 552 aa24.32■■□□□ 1.48
PTPA-204ENST00000355007 DDX19BQ9UMR2 479 aa24.31■■□□□ 1.48
PTPA-204ENST00000355007 PPP1R9BQ96SB3 815 aa24.31■■□□□ 1.48
PTPA-204ENST00000355007 TET3O43151 1660 aa24.3■■□□□ 1.48
PTPA-204ENST00000355007 ADGRL1O94910 1474 aa24.3■■□□□ 1.48
PTPA-204ENST00000355007 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
PTPA-204ENST00000355007 CFAP70Q5T0N1 1121 aa24.3■■□□□ 1.48
PTPA-204ENST00000355007 ADGRB2O60241 1585 aa24.3■■□□□ 1.48
PTPA-204ENST00000355007 USP32Q8NFA0 1604 aa24.29■■□□□ 1.48
PTPA-204ENST00000355007 DEPDC5O75140 1603 aa24.28■■□□□ 1.48
PTPA-204ENST00000355007 TRIM27P14373 513 aa24.28■■□□□ 1.48
PTPA-204ENST00000355007 KIAA1211Q6ZU35 1233 aa24.27■■□□□ 1.48
PTPA-204ENST00000355007 IBTKQ9P2D0 1353 aaPredicted RBP24.27■■□□□ 1.48
PTPA-204ENST00000355007 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
PTPA-204ENST00000355007 CFAP53Q96M91 514 aa24.27■■□□□ 1.48
PTPA-204ENST00000355007 SMC4Q9NTJ3 1288 aa24.26■■□□□ 1.47
PTPA-204ENST00000355007 ABCC1P33527 1531 aa24.26■■□□□ 1.47
PTPA-204ENST00000355007 ZSCAN30Q86W11 494 aa24.26■■□□□ 1.47
PTPA-204ENST00000355007 ITPRIPQ8IWB1 547 aa24.26■■□□□ 1.47
PTPA-204ENST00000355007 NASPP49321 788 aaPredicted RBP24.24■■□□□ 1.47
PTPA-204ENST00000355007 MTHFSP49914 203 aa24.24■■□□□ 1.47
PTPA-204ENST00000355007 ATF7IPQ6VMQ6 1270 aa24.24■■□□□ 1.47
PTPA-204ENST00000355007 NUCB1Q02818 461 aa24.23■■□□□ 1.47
PTPA-204ENST00000355007 OFD1O75665 1012 aa24.23■■□□□ 1.47
PTPA-204ENST00000355007 TERF1P54274 439 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 KIF2CQ99661 725 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 IFT172Q9UG01 1749 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 PLCH2O75038 1416 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 CLEC17AQ6ZS10 378 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
PTPA-204ENST00000355007 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
PTPA-204ENST00000355007 ZBTB40Q9NUA8 1239 aa24.21■■□□□ 1.47
PTPA-204ENST00000355007 ADGRF5Q8IZF2 1346 aa24.21■■□□□ 1.47
PTPA-204ENST00000355007 CFAP74Q9C0B2 1584 aa24.21■■□□□ 1.47
PTPA-204ENST00000355007 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
PTPA-204ENST00000355007 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.2■■□□□ 1.46
PTPA-204ENST00000355007 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
PTPA-204ENST00000355007 K7ELQ4 463 aaPredicted RBP24.2■■□□□ 1.46
PTPA-204ENST00000355007 SSH1Q8WYL5 1049 aa24.2■■□□□ 1.46
PTPA-204ENST00000355007 ZC3H13Q5T200 1668 aaKnown RBP24.2■■□□□ 1.46
PTPA-204ENST00000355007 EXOSC9Q06265 439 aaKnown RBP24.19■■□□□ 1.46
PTPA-204ENST00000355007 KLHL40Q2TBA0 621 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms