RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 STK26Q9P289 416 aa30.34■■■□□ 2.45
CNTFR-201ENST00000351266 SALL2Q9Y467 1007 aaPredicted RBP30.34■■■□□ 2.45
CNTFR-201ENST00000351266 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.32■■■□□ 2.44
CNTFR-201ENST00000351266 POLR3AO14802 1390 aaPredicted RBP30.32■■■□□ 2.44
CNTFR-201ENST00000351266 ATAD2Q6PL18 1390 aa30.31■■■□□ 2.44
CNTFR-201ENST00000351266 MORC1Q86VD1 984 aa30.31■■■□□ 2.44
CNTFR-201ENST00000351266 POGKQ9P215 609 aa30.3■■■□□ 2.44
CNTFR-201ENST00000351266 DLC1Q96QB1 1528 aa30.3■■■□□ 2.44
CNTFR-201ENST00000351266 RCAN3Q9UKA8 241 aa30.3■■■□□ 2.44
CNTFR-201ENST00000351266 HDGFP51858 240 aaKnown RBP30.28■■■□□ 2.44
CNTFR-201ENST00000351266 PRAM1Q96QH2 718 aa30.28■■■□□ 2.44
CNTFR-201ENST00000351266 NGEFQ8N5V2 710 aa30.27■■■□□ 2.44
CNTFR-201ENST00000351266 CABP2Q9NPB3 220 aa30.26■■■□□ 2.44
CNTFR-201ENST00000351266 SRPK2P78362 688 aaKnown RBP30.26■■■□□ 2.43
CNTFR-201ENST00000351266 SAFB2Q14151 953 aaKnown RBP eCLIP30.24■■■□□ 2.43
CNTFR-201ENST00000351266 RRP1P56182 461 aaKnown RBP30.24■■■□□ 2.43
CNTFR-201ENST00000351266 TNRQ92752 1358 aa30.22■■■□□ 2.43
CNTFR-201ENST00000351266 CDCA7LQ96GN5 454 aa30.22■■■□□ 2.43
CNTFR-201ENST00000351266 TERF2IPQ9NYB0 399 aa30.2■■■□□ 2.42
CNTFR-201ENST00000351266 SETD1AO15047 1707 aaKnown RBP30.2■■■□□ 2.42
CNTFR-201ENST00000351266 ABCC11Q96J66 1382 aa30.19■■■□□ 2.42
CNTFR-201ENST00000351266 MINK1Q8N4C8 1332 aaPredicted RBP30.19■■■□□ 2.42
CNTFR-201ENST00000351266 ZNF521Q96K83 1311 aa30.19■■■□□ 2.42
CNTFR-201ENST00000351266 PLEKHH1Q9ULM0 1364 aa30.17■■■□□ 2.42
CNTFR-201ENST00000351266 B4GALNT3Q6L9W6 998 aa30.16■■■□□ 2.42
CNTFR-201ENST00000351266 CFAP53Q96M91 514 aa30.16■■■□□ 2.42
CNTFR-201ENST00000351266 SENP3Q9H4L4 574 aaPredicted RBP30.16■■■□□ 2.42
CNTFR-201ENST00000351266 GOLGA2Q08379 1002 aa30.16■■■□□ 2.42
CNTFR-201ENST00000351266 A0A1W2PP64 1363 aa30.16■■■□□ 2.42
CNTFR-201ENST00000351266 NRXN3Q9Y4C0 1643 aa30.12■■■□□ 2.41
CNTFR-201ENST00000351266 CDK19Q9BWU1 502 aa30.12■■■□□ 2.41
CNTFR-201ENST00000351266 MED14O60244 1454 aa30.12■■■□□ 2.41
CNTFR-201ENST00000351266 HDGFL2Q7Z4V5 671 aaPredicted RBP30.11■■■□□ 2.41
CNTFR-201ENST00000351266 CCDC146Q8IYE0 955 aa30.1■■■□□ 2.41
CNTFR-201ENST00000351266 SIRT1Q96EB6 747 aa30.1■■■□□ 2.41
CNTFR-201ENST00000351266 CCDC136Q96JN2 1154 aa30.1■■■□□ 2.41
CNTFR-201ENST00000351266 SHPRHQ149N8 1683 aa30.09■■■□□ 2.41
CNTFR-201ENST00000351266 NLRP1Q9C000 1473 aa30.09■■■□□ 2.41
CNTFR-201ENST00000351266 APAF1O14727 1248 aa30.08■■■□□ 2.41
CNTFR-201ENST00000351266 TMEM2Q9UHN6 1383 aa30.08■■■□□ 2.41
CNTFR-201ENST00000351266 UBR1Q8IWV7 1749 aa30.08■■■□□ 2.41
CNTFR-201ENST00000351266 TNNT2P45379 298 aaPredicted RBP30.08■■■□□ 2.41
CNTFR-201ENST00000351266 MTHFSP49914 203 aa30.07■■■□□ 2.4
CNTFR-201ENST00000351266 DUSP27Q5VZP5 1158 aa30.07■■■□□ 2.4
CNTFR-201ENST00000351266 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
CNTFR-201ENST00000351266 KNDC1Q76NI1 1749 aa30.06■■■□□ 2.4
CNTFR-201ENST00000351266 FAM135BQ49AJ0 1406 aa30.06■■■□□ 2.4
CNTFR-201ENST00000351266 SLFN5Q08AF3 891 aa30.05■■■□□ 2.4
CNTFR-201ENST00000351266 TECPR2O15040 1411 aa30.05■■■□□ 2.4
CNTFR-201ENST00000351266 ANKRD26Q9UPS8 1709 aa30.04■■■□□ 2.4
CNTFR-201ENST00000351266 ATP7BP35670 1465 aa30.03■■■□□ 2.4
CNTFR-201ENST00000351266 TRMT2AQ8IZ69 625 aaKnown RBP30.02■■■□□ 2.4
CNTFR-201ENST00000351266 RUNDC1Q96C34 613 aa30.02■■■□□ 2.4
CNTFR-201ENST00000351266 METP08581 1390 aa30.02■■■□□ 2.4
CNTFR-201ENST00000351266 E9PSI1 815 aa30.01■■■□□ 2.39
CNTFR-201ENST00000351266 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.39
CNTFR-201ENST00000351266 NCBP3Q53F19 620 aaKnown RBP30■■■□□ 2.39
CNTFR-201ENST00000351266 CPS1P31327 1500 aa29.99■■■□□ 2.39
CNTFR-201ENST00000351266 CABP1Q9NZU7 370 aa29.98■■■□□ 2.39
CNTFR-201ENST00000351266 FYB1O15117 783 aa29.97■■■□□ 2.39
CNTFR-201ENST00000351266 RBM19Q9Y4C8 960 aaKnown RBP29.97■■■□□ 2.39
CNTFR-201ENST00000351266 WASLO00401 505 aaPredicted RBP29.96■■■□□ 2.39
CNTFR-201ENST00000351266 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.96■■■□□ 2.39
CNTFR-201ENST00000351266 NKTRP30414 1462 aaKnown RBP29.95■■■□□ 2.39
CNTFR-201ENST00000351266 PLEKHG1Q9ULL1 1385 aa29.95■■■□□ 2.39
CNTFR-201ENST00000351266 EXOC6Q8TAG9 804 aa29.95■■■□□ 2.39
CNTFR-201ENST00000351266 GGNBP2Q9H3C7 697 aa29.94■■■□□ 2.38
CNTFR-201ENST00000351266 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
CNTFR-201ENST00000351266 KIF20BQ96Q89 1820 aa29.92■■■□□ 2.38
CNTFR-201ENST00000351266 WWC1Q8IX03 1113 aa29.91■■■□□ 2.38
CNTFR-201ENST00000351266 TXNDC2Q86VQ3 553 aa29.9■■■□□ 2.38
CNTFR-201ENST00000351266 CCDC27Q2M243 656 aa29.9■■■□□ 2.38
CNTFR-201ENST00000351266 ADAMTS13Q76LX8 1427 aa29.9■■■□□ 2.38
CNTFR-201ENST00000351266 C3P01024 1663 aa29.9■■■□□ 2.38
CNTFR-201ENST00000351266 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
CNTFR-201ENST00000351266 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
CNTFR-201ENST00000351266 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
CNTFR-201ENST00000351266 CPSF1Q10570 1443 aaKnown RBP29.87■■■□□ 2.37
CNTFR-201ENST00000351266 PPIP5K1Q6PFW1 1433 aa29.87■■■□□ 2.37
CNTFR-201ENST00000351266 U2AF1L5P0DN76 240 aaPredicted RBP29.86■■■□□ 2.37
CNTFR-201ENST00000351266 U2AF1Q01081 240 aaKnown RBP eCLIP29.86■■■□□ 2.37
CNTFR-201ENST00000351266 WDR63Q8IWG1 891 aa29.86■■■□□ 2.37
CNTFR-201ENST00000351266 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
CNTFR-201ENST00000351266 SLIT1O75093 1534 aa29.86■■■□□ 2.37
CNTFR-201ENST00000351266 EDC4Q6P2E9 1401 aaKnown RBP29.86■■■□□ 2.37
CNTFR-201ENST00000351266 COL3A1P02461 1466 aaPredicted RBP29.86■■■□□ 2.37
CNTFR-201ENST00000351266 PLIN1O60240 522 aa29.84■■■□□ 2.37
CNTFR-201ENST00000351266 ARHGAP23Q9P227 1491 aa29.84■■■□□ 2.37
CNTFR-201ENST00000351266 CEBPAP49715 358 aaPredicted RBP29.83■■■□□ 2.37
CNTFR-201ENST00000351266 SPINK5Q9NQ38 1064 aaPredicted RBP29.83■■■□□ 2.37
CNTFR-201ENST00000351266 CCDC61Q9Y6R9 512 aa29.83■■■□□ 2.37
CNTFR-201ENST00000351266 TRHP20396 242 aaPredicted RBP29.83■■■□□ 2.37
CNTFR-201ENST00000351266 NUDT16Q96DE0 195 aaKnown RBP29.83■■■□□ 2.37
CNTFR-201ENST00000351266 PNPLA6Q8IY17 1366 aa29.82■■■□□ 2.36
CNTFR-201ENST00000351266 ADGRB2O60241 1585 aa29.82■■■□□ 2.36
CNTFR-201ENST00000351266 PNNQ9H307 717 aaKnown RBP29.82■■■□□ 2.36
CNTFR-201ENST00000351266 CDC42BPGQ6DT37 1551 aa29.82■■■□□ 2.36
CNTFR-201ENST00000351266 LTKP29376 864 aa29.81■■■□□ 2.36
CNTFR-201ENST00000351266 CRBNQ96SW2 442 aa29.8■■■□□ 2.36
CNTFR-201ENST00000351266 ROBO2Q9HCK4 1378 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms