RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 PDE3BQ13370 1112 aa31.44■■■□□ 2.62
USP25-203ENST00000351097 SLC12A5Q9H2X9 1139 aa31.43■■■□□ 2.62
USP25-203ENST00000351097 SAFB2Q14151 953 aaKnown RBP eCLIP31.43■■■□□ 2.622e-6■■■□□ 17
USP25-203ENST00000351097 PRAM1Q96QH2 718 aa31.39■■■□□ 2.62
USP25-203ENST00000351097 RRP1P56182 461 aaKnown RBP31.39■■■□□ 2.61
USP25-203ENST00000351097 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.37■■■□□ 2.61
USP25-203ENST00000351097 SETD1AO15047 1707 aaKnown RBP31.37■■■□□ 2.61
USP25-203ENST00000351097 BLMP54132 1417 aaPredicted RBP31.37■■■□□ 2.61
USP25-203ENST00000351097 RCAN3Q9UKA8 241 aa31.36■■■□□ 2.61
USP25-203ENST00000351097 NSD3Q9BZ95 1437 aa31.36■■■□□ 2.61
USP25-203ENST00000351097 CABP2Q9NPB3 220 aa31.36■■■□□ 2.61
USP25-203ENST00000351097 NRXN3Q9Y4C0 1643 aa31.35■■■□□ 2.61
USP25-203ENST00000351097 POGKQ9P215 609 aa31.34■■■□□ 2.61
USP25-203ENST00000351097 SALL2Q9Y467 1007 aaPredicted RBP31.33■■■□□ 2.61
USP25-203ENST00000351097 ERICH6Q7L0X2 663 aa31.33■■■□□ 2.61
USP25-203ENST00000351097 UBR1Q8IWV7 1749 aa31.32■■■□□ 2.6
USP25-203ENST00000351097 MINK1Q8N4C8 1332 aaPredicted RBP31.31■■■□□ 2.6
USP25-203ENST00000351097 CEBPAP49715 358 aaPredicted RBP31.3■■■□□ 2.6
USP25-203ENST00000351097 DLC1Q96QB1 1528 aa31.3■■■□□ 2.6
USP25-203ENST00000351097 TMEM2Q9UHN6 1383 aa31.3■■■□□ 2.6
USP25-203ENST00000351097 ANKRD36BQ8N2N9 1353 aa31.29■■■□□ 2.6
USP25-203ENST00000351097 HDGFP51858 240 aaKnown RBP31.28■■■□□ 2.6
USP25-203ENST00000351097 SRPK2P78362 688 aaKnown RBP31.27■■■□□ 2.6
USP25-203ENST00000351097 USP32Q8NFA0 1604 aa31.27■■■□□ 2.6
USP25-203ENST00000351097 NLRP1Q9C000 1473 aa31.26■■■□□ 2.6
USP25-203ENST00000351097 ABCC11Q96J66 1382 aa31.26■■■□□ 2.59
USP25-203ENST00000351097 ADAMTS8Q9UP79 889 aa31.26■■■□□ 2.59
USP25-203ENST00000351097 METP08581 1390 aa31.25■■■□□ 2.59
USP25-203ENST00000351097 NINLQ9Y2I6 1382 aa31.25■■■□□ 2.59
USP25-203ENST00000351097 C3P01024 1663 aa31.24■■■□□ 2.59
USP25-203ENST00000351097 ATAD2Q6PL18 1390 aa31.23■■■□□ 2.59
USP25-203ENST00000351097 CDCA7LQ96GN5 454 aa31.23■■■□□ 2.59
USP25-203ENST00000351097 FER1L4A9Z1Z3 1794 aa31.22■■■□□ 2.59
USP25-203ENST00000351097 WAPLQ7Z5K2 1190 aa31.22■■■□□ 2.59
USP25-203ENST00000351097 PLEKHH1Q9ULM0 1364 aa31.21■■■□□ 2.59
USP25-203ENST00000351097 CGNL1Q0VF96 1302 aa31.21■■■□□ 2.59
USP25-203ENST00000351097 WDR43Q15061 677 aaKnown RBP eCLIP31.21■■■□□ 2.59
USP25-203ENST00000351097 EXOC6Q8TAG9 804 aa31.21■■■□□ 2.59
USP25-203ENST00000351097 MORC1Q86VD1 984 aa31.19■■■□□ 2.58
USP25-203ENST00000351097 CDK19Q9BWU1 502 aa31.19■■■□□ 2.58
USP25-203ENST00000351097 A0A1W2PP64 1363 aa31.18■■■□□ 2.58
USP25-203ENST00000351097 LTKP29376 864 aa31.14■■■□□ 2.58
USP25-203ENST00000351097 CD163L1Q9NR16 1453 aa31.14■■■□□ 2.58
USP25-203ENST00000351097 NSD2O96028 1365 aa31.14■■■□□ 2.57
USP25-203ENST00000351097 TECPR2O15040 1411 aa31.13■■■□□ 2.57
USP25-203ENST00000351097 ADAMTS13Q76LX8 1427 aa31.13■■■□□ 2.57
USP25-203ENST00000351097 PLPPR3Q6T4P5 718 aa31.12■■■□□ 2.57
USP25-203ENST00000351097 POLR3AO14802 1390 aaPredicted RBP31.12■■■□□ 2.57
USP25-203ENST00000351097 PLEKHG1Q9ULL1 1385 aa31.11■■■□□ 2.57
USP25-203ENST00000351097 TXNDC2Q86VQ3 553 aa31.11■■■□□ 2.57
USP25-203ENST00000351097 KNDC1Q76NI1 1749 aa31.11■■■□□ 2.57
USP25-203ENST00000351097 TNNT2P45379 298 aaPredicted RBP31.1■■■□□ 2.57
USP25-203ENST00000351097 TERF2IPQ9NYB0 399 aa31.1■■■□□ 2.57
USP25-203ENST00000351097 FAM135BQ49AJ0 1406 aa31.09■■■□□ 2.57
USP25-203ENST00000351097 SIRT1Q96EB6 747 aa31.09■■■□□ 2.57
USP25-203ENST00000351097 CPS1P31327 1500 aa31.07■■■□□ 2.56
USP25-203ENST00000351097 SLIT1O75093 1534 aa31.07■■■□□ 2.56
USP25-203ENST00000351097 ARHGAP23Q9P227 1491 aa31.07■■■□□ 2.56
USP25-203ENST00000351097 CABP1Q9NZU7 370 aa31.06■■■□□ 2.56
USP25-203ENST00000351097 NOP58Q9Y2X3 529 aaKnown RBP31.05■■■□□ 2.56
USP25-203ENST00000351097 ANP32AP39687 249 aaKnown RBP31.04■■■□□ 2.56
USP25-203ENST00000351097 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
USP25-203ENST00000351097 EID1Q9Y6B2 187 aa31.03■■■□□ 2.56
USP25-203ENST00000351097 TCERG1O14776 1098 aaKnown RBP31.03■■■□□ 2.56
USP25-203ENST00000351097 MED14O60244 1454 aa31.03■■■□□ 2.56
USP25-203ENST00000351097 WASLO00401 505 aaPredicted RBP31.02■■■□□ 2.56
USP25-203ENST00000351097 HDGFL2Q7Z4V5 671 aaPredicted RBP31.02■■■□□ 2.56
USP25-203ENST00000351097 ROBO2Q9HCK4 1378 aa31■■■□□ 2.55
USP25-203ENST00000351097 PLIN1O60240 522 aa31■■■□□ 2.55
USP25-203ENST00000351097 MTHFSP49914 203 aa31■■■□□ 2.55
USP25-203ENST00000351097 CCDC146Q8IYE0 955 aa30.99■■■□□ 2.55
USP25-203ENST00000351097 FYB1O15117 783 aa30.99■■■□□ 2.55
USP25-203ENST00000351097 THEMISQ8N1K5 641 aaPredicted RBP30.98■■■□□ 2.55
USP25-203ENST00000351097 GGNBP2Q9H3C7 697 aa30.98■■■□□ 2.55
USP25-203ENST00000351097 ATP7BP35670 1465 aa30.98■■■□□ 2.55
USP25-203ENST00000351097 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
USP25-203ENST00000351097 ZNF521Q96K83 1311 aa30.97■■■□□ 2.55
USP25-203ENST00000351097 SLC26A8Q96RN1 970 aa30.96■■■□□ 2.55
USP25-203ENST00000351097 IPO9Q96P70 1041 aaKnown RBP30.96■■■□□ 2.55
USP25-203ENST00000351097 CRBNQ96SW2 442 aa30.95■■■□□ 2.55
USP25-203ENST00000351097 DUSP27Q5VZP5 1158 aa30.93■■■□□ 2.54
USP25-203ENST00000351097 PTPRUQ92729 1446 aa30.93■■■□□ 2.54
USP25-203ENST00000351097 ANKRD26Q9UPS8 1709 aa30.92■■■□□ 2.54
USP25-203ENST00000351097 RIMS1Q86UR5 1692 aaKnown RBP30.92■■■□□ 2.54
USP25-203ENST00000351097 MS4A1P11836 297 aa30.92■■■□□ 2.54
USP25-203ENST00000351097 PPIP5K1Q6PFW1 1433 aa30.92■■■□□ 2.54
USP25-203ENST00000351097 GOLGA2Q08379 1002 aa30.92■■■□□ 2.54
USP25-203ENST00000351097 APAF1O14727 1248 aa30.91■■■□□ 2.54
USP25-203ENST00000351097 CFAP53Q96M91 514 aa30.91■■■□□ 2.54
USP25-203ENST00000351097 NUDT16Q96DE0 195 aaKnown RBP30.9■■■□□ 2.54
USP25-203ENST00000351097 TBX22Q9Y458 520 aa30.9■■■□□ 2.54
USP25-203ENST00000351097 CPSF1Q10570 1443 aaKnown RBP30.9■■■□□ 2.54
USP25-203ENST00000351097 PAK3O75914 559 aaPredicted RBP30.89■■■□□ 2.54
USP25-203ENST00000351097 CEP170BQ9Y4F5 1589 aaPredicted RBP30.88■■■□□ 2.53
USP25-203ENST00000351097 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.87■■■□□ 2.53
USP25-203ENST00000351097 ADGRB2O60241 1585 aa30.86■■■□□ 2.53
USP25-203ENST00000351097 CCDC61Q9Y6R9 512 aa30.86■■■□□ 2.53
USP25-203ENST00000351097 KIF20BQ96Q89 1820 aa30.86■■■□□ 2.53
USP25-203ENST00000351097 NCKAP5LQ9HCH0 1330 aa30.86■■■□□ 2.53
USP25-203ENST00000351097 PDE4AP27815 886 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms