RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
CHRNA3-202ENST00000348639 RIMS2Q9UQ26 1411 aa27.06■■□□□ 1.92
CHRNA3-202ENST00000348639 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
CHRNA3-202ENST00000348639 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
CHRNA3-202ENST00000348639 PRAM1Q96QH2 718 aa27.04■■□□□ 1.92
CHRNA3-202ENST00000348639 CDCA7LQ96GN5 454 aa27.04■■□□□ 1.92
CHRNA3-202ENST00000348639 POGKQ9P215 609 aa27.04■■□□□ 1.92
CHRNA3-202ENST00000348639 NINLQ9Y2I6 1382 aa27.03■■□□□ 1.92
CHRNA3-202ENST00000348639 RCAN3Q9UKA8 241 aa27.02■■□□□ 1.92
CHRNA3-202ENST00000348639 CGNL1Q0VF96 1302 aa27.02■■□□□ 1.92
CHRNA3-202ENST00000348639 MORC1Q86VD1 984 aa27.01■■□□□ 1.91
CHRNA3-202ENST00000348639 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
CHRNA3-202ENST00000348639 MINK1Q8N4C8 1332 aaPredicted RBP27■■□□□ 1.91
CHRNA3-202ENST00000348639 SRPK2P78362 688 aaKnown RBP27■■□□□ 1.91
CHRNA3-202ENST00000348639 TNRQ92752 1358 aa26.98■■□□□ 1.91
CHRNA3-202ENST00000348639 NSD2O96028 1365 aa26.97■■□□□ 1.91
CHRNA3-202ENST00000348639 RRP1P56182 461 aaKnown RBP26.97■■□□□ 1.91
CHRNA3-202ENST00000348639 B4GALNT3Q6L9W6 998 aa26.97■■□□□ 1.91
CHRNA3-202ENST00000348639 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
CHRNA3-202ENST00000348639 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
CHRNA3-202ENST00000348639 ZNF521Q96K83 1311 aa26.96■■□□□ 1.91
CHRNA3-202ENST00000348639 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.95■■□□□ 1.91
CHRNA3-202ENST00000348639 DLC1Q96QB1 1528 aa26.95■■□□□ 1.9
CHRNA3-202ENST00000348639 SETD1AO15047 1707 aaKnown RBP26.93■■□□□ 1.9
CHRNA3-202ENST00000348639 TNNT2P45379 298 aaPredicted RBP26.93■■□□□ 1.9
CHRNA3-202ENST00000348639 A0A1W2PP64 1363 aa26.91■■□□□ 1.9
CHRNA3-202ENST00000348639 HDGFP51858 240 aaKnown RBP26.9■■□□□ 1.9
CHRNA3-202ENST00000348639 CCDC146Q8IYE0 955 aa26.9■■□□□ 1.9
CHRNA3-202ENST00000348639 ABCC11Q96J66 1382 aa26.89■■□□□ 1.9
CHRNA3-202ENST00000348639 CEBPAP49715 358 aaPredicted RBP26.89■■□□□ 1.9
CHRNA3-202ENST00000348639 WAPLQ7Z5K2 1190 aa26.89■■□□□ 1.89
CHRNA3-202ENST00000348639 NGEFQ8N5V2 710 aa26.89■■□□□ 1.89
CHRNA3-202ENST00000348639 GOLGA2Q08379 1002 aa26.88■■□□□ 1.89
CHRNA3-202ENST00000348639 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
CHRNA3-202ENST00000348639 TERF2IPQ9NYB0 399 aa26.87■■□□□ 1.89
CHRNA3-202ENST00000348639 PLPPR3Q6T4P5 718 aa26.87■■□□□ 1.89
CHRNA3-202ENST00000348639 CDK19Q9BWU1 502 aa26.87■■□□□ 1.89
CHRNA3-202ENST00000348639 APAF1O14727 1248 aa26.86■■□□□ 1.89
CHRNA3-202ENST00000348639 DUSP27Q5VZP5 1158 aa26.85■■□□□ 1.89
CHRNA3-202ENST00000348639 SHPRHQ149N8 1683 aa26.85■■□□□ 1.89
CHRNA3-202ENST00000348639 CD163L1Q9NR16 1453 aa26.84■■□□□ 1.89
CHRNA3-202ENST00000348639 MTHFSP49914 203 aa26.84■■□□□ 1.89
CHRNA3-202ENST00000348639 METP08581 1390 aa26.84■■□□□ 1.89
CHRNA3-202ENST00000348639 CCDC136Q96JN2 1154 aa26.83■■□□□ 1.89
CHRNA3-202ENST00000348639 UBR1Q8IWV7 1749 aa26.83■■□□□ 1.89
CHRNA3-202ENST00000348639 TMEM2Q9UHN6 1383 aa26.83■■□□□ 1.89
CHRNA3-202ENST00000348639 CFAP53Q96M91 514 aa26.82■■□□□ 1.88
CHRNA3-202ENST00000348639 SLFN5Q08AF3 891 aa26.82■■□□□ 1.88
CHRNA3-202ENST00000348639 MED14O60244 1454 aa26.8■■□□□ 1.88
CHRNA3-202ENST00000348639 HDGFL2Q7Z4V5 671 aaPredicted RBP26.8■■□□□ 1.88
CHRNA3-202ENST00000348639 TRMT2AQ8IZ69 625 aaKnown RBP26.8■■□□□ 1.88
CHRNA3-202ENST00000348639 RBM19Q9Y4C8 960 aaKnown RBP26.8■■□□□ 1.88
CHRNA3-202ENST00000348639 TXNDC2Q86VQ3 553 aa26.79■■□□□ 1.88
CHRNA3-202ENST00000348639 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
CHRNA3-202ENST00000348639 EXOC6Q8TAG9 804 aa26.77■■□□□ 1.88
CHRNA3-202ENST00000348639 SIRT1Q96EB6 747 aa26.77■■□□□ 1.88
CHRNA3-202ENST00000348639 NLRP1Q9C000 1473 aa26.76■■□□□ 1.87
CHRNA3-202ENST00000348639 FYB1O15117 783 aa26.76■■□□□ 1.87
CHRNA3-202ENST00000348639 TECPR2O15040 1411 aa26.75■■□□□ 1.87
CHRNA3-202ENST00000348639 RUNDC1Q96C34 613 aa26.75■■□□□ 1.87
CHRNA3-202ENST00000348639 GGNBP2Q9H3C7 697 aa26.75■■□□□ 1.87
CHRNA3-202ENST00000348639 ANKRD26Q9UPS8 1709 aa26.75■■□□□ 1.87
CHRNA3-202ENST00000348639 C3P01024 1663 aa26.74■■□□□ 1.87
CHRNA3-202ENST00000348639 FAM135BQ49AJ0 1406 aa26.74■■□□□ 1.87
CHRNA3-202ENST00000348639 KNDC1Q76NI1 1749 aa26.74■■□□□ 1.87
CHRNA3-202ENST00000348639 E9PSI1 815 aa26.73■■□□□ 1.87
CHRNA3-202ENST00000348639 FER1L4A9Z1Z3 1794 aa26.73■■□□□ 1.87
CHRNA3-202ENST00000348639 ATP7BP35670 1465 aa26.73■■□□□ 1.87
CHRNA3-202ENST00000348639 LTKP29376 864 aa26.73■■□□□ 1.87
CHRNA3-202ENST00000348639 PLIN1O60240 522 aa26.71■■□□□ 1.87
CHRNA3-202ENST00000348639 SPINK5Q9NQ38 1064 aaPredicted RBP26.71■■□□□ 1.87
CHRNA3-202ENST00000348639 WASLO00401 505 aaPredicted RBP26.7■■□□□ 1.87
CHRNA3-202ENST00000348639 IQSEC2Q5JU85 1478 aa26.7■■□□□ 1.86
CHRNA3-202ENST00000348639 WWC1Q8IX03 1113 aa26.7■■□□□ 1.86
CHRNA3-202ENST00000348639 CPS1P31327 1500 aa26.69■■□□□ 1.86
CHRNA3-202ENST00000348639 NKTRP30414 1462 aaKnown RBP26.69■■□□□ 1.86
CHRNA3-202ENST00000348639 EID1Q9Y6B2 187 aa26.68■■□□□ 1.86
CHRNA3-202ENST00000348639 PLEKHG1Q9ULL1 1385 aa26.67■■□□□ 1.86
CHRNA3-202ENST00000348639 ADAMTS13Q76LX8 1427 aa26.67■■□□□ 1.86
CHRNA3-202ENST00000348639 TCP11L2Q8N4U5 519 aa26.66■■□□□ 1.86
CHRNA3-202ENST00000348639 NCBP3Q53F19 620 aaKnown RBP26.66■■□□□ 1.86
CHRNA3-202ENST00000348639 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
CHRNA3-202ENST00000348639 KIF20BQ96Q89 1820 aa26.65■■□□□ 1.86
CHRNA3-202ENST00000348639 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
CHRNA3-202ENST00000348639 COL3A1P02461 1466 aaPredicted RBP26.64■■□□□ 1.86
CHRNA3-202ENST00000348639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.64■■□□□ 1.86
CHRNA3-202ENST00000348639 SLC26A8Q96RN1 970 aa26.64■■□□□ 1.86
CHRNA3-202ENST00000348639 U2AF1L5P0DN76 240 aaPredicted RBP26.63■■□□□ 1.85
CHRNA3-202ENST00000348639 U2AF1Q01081 240 aaKnown RBP eCLIP26.63■■□□□ 1.85
CHRNA3-202ENST00000348639 CPSF1Q10570 1443 aaKnown RBP26.63■■□□□ 1.85
CHRNA3-202ENST00000348639 CCDC27Q2M243 656 aa26.63■■□□□ 1.85
CHRNA3-202ENST00000348639 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.63■■□□□ 1.85
CHRNA3-202ENST00000348639 CRBNQ96SW2 442 aa26.62■■□□□ 1.85
CHRNA3-202ENST00000348639 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
CHRNA3-202ENST00000348639 ROBO2Q9HCK4 1378 aa26.62■■□□□ 1.85
CHRNA3-202ENST00000348639 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
CHRNA3-202ENST00000348639 EDC4Q6P2E9 1401 aaKnown RBP26.6■■□□□ 1.85
CHRNA3-202ENST00000348639 WDR63Q8IWG1 891 aa26.6■■□□□ 1.85
CHRNA3-202ENST00000348639 PNPLA6Q8IY17 1366 aa26.59■■□□□ 1.85
CHRNA3-202ENST00000348639 NEUROD2Q15784 382 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms