RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
SPAST-202ENST00000345662 ANKRD20A12PQ8NF67 263 aa21.07■□□□□ 0.96
SPAST-202ENST00000345662 COG3Q96JB2 828 aa21.07■□□□□ 0.96
SPAST-202ENST00000345662 TCP11L2Q8N4U5 519 aa21.07■□□□□ 0.96
SPAST-202ENST00000345662 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
SPAST-202ENST00000345662 CPLX1O14810 134 aa21.05■□□□□ 0.96
SPAST-202ENST00000345662 FBXW7Q969H0 707 aa21.05■□□□□ 0.96
SPAST-202ENST00000345662 TRIM29Q14134 588 aa21.05■□□□□ 0.96
SPAST-202ENST00000345662 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
SPAST-202ENST00000345662 AK7Q96M32 723 aa21.04■□□□□ 0.96
SPAST-202ENST00000345662 STAC3Q96MF2 364 aa21.04■□□□□ 0.96
SPAST-202ENST00000345662 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
SPAST-202ENST00000345662 AKAP17AQ02040 695 aaKnown RBP21.03■□□□□ 0.96
SPAST-202ENST00000345662 LRRFIP1Q32MZ4 808 aaKnown RBP21.03■□□□□ 0.96
SPAST-202ENST00000345662 RUFY1Q96T51 708 aa21.02■□□□□ 0.96
SPAST-202ENST00000345662 ERC2O15083 957 aa21.02■□□□□ 0.96
SPAST-202ENST00000345662 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.96
SPAST-202ENST00000345662 HSP90AB4PQ58FF6 505 aa21.02■□□□□ 0.96
SPAST-202ENST00000345662 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.96
SPAST-202ENST00000345662 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
SPAST-202ENST00000345662 VGFO15240 615 aaPredicted RBP21.01■□□□□ 0.95
SPAST-202ENST00000345662 CSB-PGBD3P0DP91 1061 aa21.01■□□□□ 0.95
SPAST-202ENST00000345662 CCDC112Q8NEF3 446 aa21.01■□□□□ 0.95
SPAST-202ENST00000345662 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
SPAST-202ENST00000345662 NGDNQ8NEJ9 315 aaKnown RBP21.01■□□□□ 0.95
SPAST-202ENST00000345662 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
SPAST-202ENST00000345662 IGF1RP08069 1367 aa21.01■□□□□ 0.95
SPAST-202ENST00000345662 LTV1Q96GA3 475 aaPredicted RBP21■□□□□ 0.95
SPAST-202ENST00000345662 SDF4Q9BRK5 362 aa21■□□□□ 0.95
SPAST-202ENST00000345662 NBPF8Q3BBV2 869 aa21■□□□□ 0.95
SPAST-202ENST00000345662 PDCL3Q9H2J4 239 aa21■□□□□ 0.95
SPAST-202ENST00000345662 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
SPAST-202ENST00000345662 PDE4CQ08493 712 aa21■□□□□ 0.95
SPAST-202ENST00000345662 FIBPO43427 364 aa20.99■□□□□ 0.95
SPAST-202ENST00000345662 CCP110O43303 1012 aa20.99■□□□□ 0.95
SPAST-202ENST00000345662 ERCC4Q92889 916 aaPredicted RBP20.99■□□□□ 0.95
SPAST-202ENST00000345662 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
SPAST-202ENST00000345662 CCDC192P0DO97 292 aa20.98■□□□□ 0.95
SPAST-202ENST00000345662 EXOSC9Q06265 439 aaKnown RBP20.98■□□□□ 0.95
SPAST-202ENST00000345662 PCMTD1Q96MG8 357 aaPredicted RBP20.98■□□□□ 0.95
SPAST-202ENST00000345662 NCOA2Q15596 1464 aa20.98■□□□□ 0.95
SPAST-202ENST00000345662 PDCP20941 246 aa20.98■□□□□ 0.95
SPAST-202ENST00000345662 PATL2C9JE40 543 aaKnown RBP20.97■□□□□ 0.95
SPAST-202ENST00000345662 LEKR1Q6ZMV7 388 aa20.97■□□□□ 0.95
SPAST-202ENST00000345662 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
SPAST-202ENST00000345662 PSMA5P28066 241 aa20.96■□□□□ 0.95
SPAST-202ENST00000345662 TAF3Q5VWG9 929 aa20.96■□□□□ 0.95
SPAST-202ENST00000345662 MPNDQ8N594 471 aa20.96■□□□□ 0.95
SPAST-202ENST00000345662 MTHFSP49914 203 aa20.96■□□□□ 0.95
SPAST-202ENST00000345662 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
SPAST-202ENST00000345662 G3BP1Q13283 466 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPAST-202ENST00000345662 CASKIN1Q8WXD9 1431 aa20.96■□□□□ 0.95
SPAST-202ENST00000345662 WDR33Q9C0J8 1336 aaKnown RBP20.96■□□□□ 0.95
SPAST-202ENST00000345662 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.95
SPAST-202ENST00000345662 NEXNQ0ZGT2 675 aa20.95■□□□□ 0.95
SPAST-202ENST00000345662 MVPQ14764 893 aaKnown RBP20.95■□□□□ 0.94
SPAST-202ENST00000345662 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
SPAST-202ENST00000345662 MINK1Q8N4C8 1332 aaPredicted RBP20.95■□□□□ 0.94
SPAST-202ENST00000345662 KINO60870 393 aaKnown RBP20.95■□□□□ 0.94
SPAST-202ENST00000345662 EIF2S2P20042 333 aaKnown RBP20.95■□□□□ 0.94
SPAST-202ENST00000345662 H0YHG0 523 aa20.94■□□□□ 0.94
SPAST-202ENST00000345662 PDCL2Q8N4E4 241 aa20.94■□□□□ 0.94
SPAST-202ENST00000345662 CDR1P51861 262 aa20.94■□□□□ 0.94
SPAST-202ENST00000345662 PDILTQ8N807 584 aa20.94■□□□□ 0.94
SPAST-202ENST00000345662 TEFQ10587 303 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 MARCH6O60337 910 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 FOSBP53539 338 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 CNTROBQ8N137 903 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 JPH4Q96JJ6 628 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 CT47B1P0C2W7 299 aaPredicted RBP20.93■□□□□ 0.94
SPAST-202ENST00000345662 NECTIN2Q92692 538 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 SMC2O95347 1197 aa20.93■□□□□ 0.94
SPAST-202ENST00000345662 CCDC47Q96A33 483 aaKnown RBP20.93■□□□□ 0.94
SPAST-202ENST00000345662 NOB1Q9ULX3 412 aaKnown RBP20.93■□□□□ 0.94
SPAST-202ENST00000345662 TRDNQ13061 729 aa20.92■□□□□ 0.94
SPAST-202ENST00000345662 DHX8Q14562 1220 aaKnown RBP20.92■□□□□ 0.94
SPAST-202ENST00000345662 APPP05067 770 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 HMOX1P09601 288 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 CHD1LQ86WJ1 897 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 C1orf115Q9H7X2 142 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 WDR63Q8IWG1 891 aa20.91■□□□□ 0.94
SPAST-202ENST00000345662 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
SPAST-202ENST00000345662 NUTM2FA1L443 756 aa20.9■□□□□ 0.94
SPAST-202ENST00000345662 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.94
SPAST-202ENST00000345662 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.93
SPAST-202ENST00000345662 RDXP35241 583 aaKnown RBP20.89■□□□□ 0.93
SPAST-202ENST00000345662 ZMYND15Q9H091 742 aa20.88■□□□□ 0.93
SPAST-202ENST00000345662 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
SPAST-202ENST00000345662 GNAI3P08754 354 aa20.88■□□□□ 0.93
SPAST-202ENST00000345662 TNMDQ9H2S6 317 aa20.88■□□□□ 0.93
SPAST-202ENST00000345662 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
SPAST-202ENST00000345662 SAFBQ15424 915 aaKnown RBP eCLIP20.87■□□□□ 0.93
SPAST-202ENST00000345662 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
SPAST-202ENST00000345662 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
SPAST-202ENST00000345662 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
SPAST-202ENST00000345662 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
SPAST-202ENST00000345662 SYCE3A1L190 88 aa20.87■□□□□ 0.93
SPAST-202ENST00000345662 SKAP1Q86WV1 359 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms