RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 MARF1Q9Y4F3 1742 aaKnown RBP27.24■■□□□ 1.95
MUC1-204ENST00000343256 ITGAEP38570 1179 aa27.24■■□□□ 1.95
MUC1-204ENST00000343256 XPCQ01831 940 aaPredicted RBP27.24■■□□□ 1.95
MUC1-204ENST00000343256 DEFB132Q7Z7B7 95 aa27.24■■□□□ 1.95
MUC1-204ENST00000343256 BLMP54132 1417 aaPredicted RBP27.21■■□□□ 1.95
MUC1-204ENST00000343256 ESCO1Q5FWF5 840 aa27.2■■□□□ 1.94
MUC1-204ENST00000343256 PXDNQ92626 1479 aa27.19■■□□□ 1.94
MUC1-204ENST00000343256 NPHP3Q7Z494 1330 aa27.19■■□□□ 1.94
MUC1-204ENST00000343256 GLI3P10071 1580 aa27.18■■□□□ 1.94
MUC1-204ENST00000343256 FOXO3O43524 673 aa27.17■■□□□ 1.94
MUC1-204ENST00000343256 RALGAPBQ86X10 1494 aa27.17■■□□□ 1.94
MUC1-204ENST00000343256 KIF1BO60333 1816 aa27.16■■□□□ 1.94
MUC1-204ENST00000343256 BRWD3Q6RI45 1802 aa27.16■■□□□ 1.94
MUC1-204ENST00000343256 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.15■■□□□ 1.94
MUC1-204ENST00000343256 UNC5CLQ8IV45 518 aa27.14■■□□□ 1.94
MUC1-204ENST00000343256 HFM1A2PYH4 1435 aa27.14■■□□□ 1.93
MUC1-204ENST00000343256 LRP5O75197 1615 aa27.12■■□□□ 1.93
MUC1-204ENST00000343256 PRAG1Q86YV5 1406 aa27.11■■□□□ 1.93
MUC1-204ENST00000343256 NUTM2FA1L443 756 aa27.11■■□□□ 1.93
MUC1-204ENST00000343256 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
MUC1-204ENST00000343256 SF3B2Q13435 895 aaKnown RBP27.11■■□□□ 1.93
MUC1-204ENST00000343256 SLIT2O94813 1529 aa27.11■■□□□ 1.93
MUC1-204ENST00000343256 CDC42BPGQ6DT37 1551 aa27.09■■□□□ 1.93
MUC1-204ENST00000343256 SEPT12Q8IYM1 358 aa27.08■■□□□ 1.93
MUC1-204ENST00000343256 PSDA5PKW4 1024 aaPredicted RBP27.07■■□□□ 1.92
MUC1-204ENST00000343256 LRPPRCP42704 1394 aaKnown RBP27.04■■□□□ 1.92
MUC1-204ENST00000343256 NAIPQ13075 1403 aa27.03■■□□□ 1.92
MUC1-204ENST00000343256 USP32Q8NFA0 1604 aa27.01■■□□□ 1.92
MUC1-204ENST00000343256 SPATA31A3Q5VYP0 1347 aa27.01■■□□□ 1.91
MUC1-204ENST00000343256 PLEKHG5O94827 1062 aa27.01■■□□□ 1.91
MUC1-204ENST00000343256 WAPLQ7Z5K2 1190 aa27■■□□□ 1.91
MUC1-204ENST00000343256 CCDC9Q9Y3X0 531 aaKnown RBP26.99■■□□□ 1.91
MUC1-204ENST00000343256 PPLO60437 1756 aa26.99■■□□□ 1.91
MUC1-204ENST00000343256 HRCP23327 699 aa26.98■■□□□ 1.91
MUC1-204ENST00000343256 KRT27Q7Z3Y8 459 aa26.98■■□□□ 1.91
MUC1-204ENST00000343256 STK26Q9P289 416 aa26.98■■□□□ 1.91
MUC1-204ENST00000343256 RPGRIP1LQ68CZ1 1315 aa26.97■■□□□ 1.91
MUC1-204ENST00000343256 VPS72Q15906 364 aa26.97■■□□□ 1.91
MUC1-204ENST00000343256 HAP1P54257 671 aaPredicted RBP26.96■■□□□ 1.91
MUC1-204ENST00000343256 CABLES1Q8TDN4 633 aa26.96■■□□□ 1.91
MUC1-204ENST00000343256 KRT28Q7Z3Y7 464 aa26.94■■□□□ 1.9
MUC1-204ENST00000343256 PLCH1Q4KWH8 1693 aa26.94■■□□□ 1.9
MUC1-204ENST00000343256 PLEKHH1Q9ULM0 1364 aa26.94■■□□□ 1.9
MUC1-204ENST00000343256 ONECUT3O60422 494 aaPredicted RBP26.93■■□□□ 1.9
MUC1-204ENST00000343256 BAG6P46379 1132 aa26.93■■□□□ 1.9
MUC1-204ENST00000343256 CCDC144AA2RUR9 1427 aa26.92■■□□□ 1.9
MUC1-204ENST00000343256 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
MUC1-204ENST00000343256 FMN2Q9NZ56 1722 aa26.91■■□□□ 1.9
MUC1-204ENST00000343256 A0A0G2JS52 829 aa26.91■■□□□ 1.9
MUC1-204ENST00000343256 MYT1Q01538 1121 aa26.91■■□□□ 1.9
MUC1-204ENST00000343256 KIF1AQ12756 1690 aa26.9■■□□□ 1.9
MUC1-204ENST00000343256 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
MUC1-204ENST00000343256 NWD2Q9ULI1 1742 aa26.89■■□□□ 1.9
MUC1-204ENST00000343256 TECPR2O15040 1411 aa26.88■■□□□ 1.89
MUC1-204ENST00000343256 TNS3Q68CZ2 1445 aa26.88■■□□□ 1.89
MUC1-204ENST00000343256 EN1Q05925 392 aaPredicted RBP26.87■■□□□ 1.89
MUC1-204ENST00000343256 TMEM132EQ6IEE7 984 aa26.86■■□□□ 1.89
MUC1-204ENST00000343256 RGPD8O14715 1765 aaPredicted RBP26.85■■□□□ 1.89
MUC1-204ENST00000343256 R3HDM1Q15032 1099 aaKnown RBP26.85■■□□□ 1.89
MUC1-204ENST00000343256 LMOD2Q6P5Q4 547 aa26.85■■□□□ 1.89
MUC1-204ENST00000343256 ABCA3Q99758 1704 aa26.85■■□□□ 1.89
MUC1-204ENST00000343256 FAM98CQ17RN3 349 aaKnown RBP26.84■■□□□ 1.89
MUC1-204ENST00000343256 FAM83GA6ND36 823 aa26.83■■□□□ 1.89
MUC1-204ENST00000343256 FAM182BQ5T319 152 aa26.83■■□□□ 1.89
MUC1-204ENST00000343256 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
MUC1-204ENST00000343256 PHF8Q9UPP1 1060 aa26.82■■□□□ 1.88
MUC1-204ENST00000343256 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
MUC1-204ENST00000343256 PSME1Q06323 249 aa26.81■■□□□ 1.88
MUC1-204ENST00000343256 ABCC11Q96J66 1382 aa26.81■■□□□ 1.88
MUC1-204ENST00000343256 RGL3Q3MIN7 710 aa26.79■■□□□ 1.88
MUC1-204ENST00000343256 SLC4A1APQ9BWU0 796 aaKnown RBP26.79■■□□□ 1.88
MUC1-204ENST00000343256 RGPD1P0DJD0 1748 aa26.79■■□□□ 1.88
MUC1-204ENST00000343256 NRAPQ86VF7 1730 aa26.79■■□□□ 1.88
MUC1-204ENST00000343256 IFT172Q9UG01 1749 aa26.78■■□□□ 1.88
MUC1-204ENST00000343256 SBNO1A3KN83 1393 aa26.76■■□□□ 1.87
MUC1-204ENST00000343256 BTG4Q9NY30 223 aa26.75■■□□□ 1.87
MUC1-204ENST00000343256 NRXN1Q9ULB1 1477 aa26.74■■□□□ 1.87
MUC1-204ENST00000343256 YTHDC2Q9H6S0 1430 aaKnown RBP26.74■■□□□ 1.87
MUC1-204ENST00000343256 ARHGEF10O15013 1369 aa26.74■■□□□ 1.87
MUC1-204ENST00000343256 EZH2Q15910 746 aaKnown RBP26.73■■□□□ 1.87
MUC1-204ENST00000343256 TNS1Q9HBL0 1735 aaKnown RBP26.71■■□□□ 1.87
MUC1-204ENST00000343256 PMFBP1Q8TBY8 1022 aa26.71■■□□□ 1.87
MUC1-204ENST00000343256 PIK3C2GO75747 1445 aa26.69■■□□□ 1.86
MUC1-204ENST00000343256 ANKRD30BQ9BXX2 1392 aa26.69■■□□□ 1.86
MUC1-204ENST00000343256 DISP2A7MBM2 1401 aa26.68■■□□□ 1.86
MUC1-204ENST00000343256 YY1P25490 414 aa26.68■■□□□ 1.86
MUC1-204ENST00000343256 SAFB2Q14151 953 aaKnown RBP eCLIP26.68■■□□□ 1.86
MUC1-204ENST00000343256 SPATA31E1Q6ZUB1 1445 aa26.67■■□□□ 1.86
MUC1-204ENST00000343256 COL14A1Q05707 1796 aaKnown RBP26.66■■□□□ 1.86
MUC1-204ENST00000343256 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
MUC1-204ENST00000343256 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
MUC1-204ENST00000343256 THSD7AQ9UPZ6 1657 aa26.64■■□□□ 1.86
MUC1-204ENST00000343256 SIRT1Q96EB6 747 aa26.64■■□□□ 1.86
MUC1-204ENST00000343256 CAMKK2Q96RR4 588 aa26.64■■□□□ 1.86
MUC1-204ENST00000343256 TRIM37O94972 964 aa26.63■■□□□ 1.85
MUC1-204ENST00000343256 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
MUC1-204ENST00000343256 PRAM1Q96QH2 718 aa26.61■■□□□ 1.85
MUC1-204ENST00000343256 ALS2Q96Q42 1657 aa26.59■■□□□ 1.85
MUC1-204ENST00000343256 ADGRB2O60241 1585 aa26.58■■□□□ 1.85
MUC1-204ENST00000343256 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms