RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
SYDE1-201ENST00000342784 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
SYDE1-201ENST00000342784 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
SYDE1-201ENST00000342784 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
SYDE1-201ENST00000342784 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
SYDE1-201ENST00000342784 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
SYDE1-201ENST00000342784 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
SYDE1-201ENST00000342784 RIPK4P57078 832 aa17.16■□□□□ 0.34
SYDE1-201ENST00000342784 PTMSP20962 102 aa17.16■□□□□ 0.34
SYDE1-201ENST00000342784 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
SYDE1-201ENST00000342784 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
SYDE1-201ENST00000342784 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
SYDE1-201ENST00000342784 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
SYDE1-201ENST00000342784 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
SYDE1-201ENST00000342784 UQCRHP07919 91 aa17.14■□□□□ 0.33
SYDE1-201ENST00000342784 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
SYDE1-201ENST00000342784 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
SYDE1-201ENST00000342784 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
SYDE1-201ENST00000342784 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
SYDE1-201ENST00000342784 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
SYDE1-201ENST00000342784 TERF1P54274 439 aa17.13■□□□□ 0.33
SYDE1-201ENST00000342784 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
SYDE1-201ENST00000342784 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
SYDE1-201ENST00000342784 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
SYDE1-201ENST00000342784 E9PCH4 1651 aa17.12■□□□□ 0.33
SYDE1-201ENST00000342784 DNMT1P26358 1616 aaKnown RBP17.12■□□□□ 0.33
SYDE1-201ENST00000342784 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
SYDE1-201ENST00000342784 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
SYDE1-201ENST00000342784 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
SYDE1-201ENST00000342784 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
SYDE1-201ENST00000342784 PLCH2O75038 1416 aa17.11■□□□□ 0.33
SYDE1-201ENST00000342784 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
SYDE1-201ENST00000342784 NINLQ9Y2I6 1382 aa17.11■□□□□ 0.33
SYDE1-201ENST00000342784 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
SYDE1-201ENST00000342784 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
SYDE1-201ENST00000342784 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
SYDE1-201ENST00000342784 CD109Q6YHK3 1445 aa17.1■□□□□ 0.33
SYDE1-201ENST00000342784 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
SYDE1-201ENST00000342784 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
SYDE1-201ENST00000342784 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
SYDE1-201ENST00000342784 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
SYDE1-201ENST00000342784 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
SYDE1-201ENST00000342784 ANKRD50Q9ULJ7 1429 aa17.09■□□□□ 0.33
SYDE1-201ENST00000342784 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
SYDE1-201ENST00000342784 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.33
SYDE1-201ENST00000342784 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.33
SYDE1-201ENST00000342784 FANCAO15360 1455 aa17.08■□□□□ 0.33
SYDE1-201ENST00000342784 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.33
SYDE1-201ENST00000342784 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
SYDE1-201ENST00000342784 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
SYDE1-201ENST00000342784 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 NEUROD2Q15784 382 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
SYDE1-201ENST00000342784 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
SYDE1-201ENST00000342784 CHRM1P11229 460 aaPredicted RBP17.06■□□□□ 0.32
SYDE1-201ENST00000342784 TESK2Q96S53 571 aa17.05■□□□□ 0.32
SYDE1-201ENST00000342784 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
SYDE1-201ENST00000342784 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
SYDE1-201ENST00000342784 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
SYDE1-201ENST00000342784 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
SYDE1-201ENST00000342784 ZMYM3Q14202 1370 aa17.05■□□□□ 0.32
SYDE1-201ENST00000342784 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
SYDE1-201ENST00000342784 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
SYDE1-201ENST00000342784 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
SYDE1-201ENST00000342784 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
SYDE1-201ENST00000342784 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
SYDE1-201ENST00000342784 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
SYDE1-201ENST00000342784 DMTNQ08495 405 aa17■□□□□ 0.31
SYDE1-201ENST00000342784 NGEFQ8N5V2 710 aa17■□□□□ 0.31
SYDE1-201ENST00000342784 RLBP1P12271 317 aa17■□□□□ 0.31
SYDE1-201ENST00000342784 HS1BP3Q53T59 392 aa17■□□□□ 0.31
SYDE1-201ENST00000342784 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
SYDE1-201ENST00000342784 TNNQ9UQP3 1299 aa17■□□□□ 0.31
SYDE1-201ENST00000342784 KIF3BO15066 747 aa16.99■□□□□ 0.31
SYDE1-201ENST00000342784 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
SYDE1-201ENST00000342784 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
SYDE1-201ENST00000342784 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
SYDE1-201ENST00000342784 ZBTB7CA1YPR0 619 aa16.99■□□□□ 0.31
SYDE1-201ENST00000342784 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
SYDE1-201ENST00000342784 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
SYDE1-201ENST00000342784 SASS6Q6UVJ0 657 aa16.99■□□□□ 0.31
SYDE1-201ENST00000342784 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
SYDE1-201ENST00000342784 RARSP54136 660 aaKnown RBP16.98■□□□□ 0.31
SYDE1-201ENST00000342784 KLHL40Q2TBA0 621 aa16.98■□□□□ 0.31
SYDE1-201ENST00000342784 SNX21Q969T3 373 aa16.98■□□□□ 0.31
SYDE1-201ENST00000342784 ZNF500O60304 480 aaPredicted RBP16.98■□□□□ 0.31
SYDE1-201ENST00000342784 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
SYDE1-201ENST00000342784 SSFA2P28290 1259 aa16.98■□□□□ 0.31
SYDE1-201ENST00000342784 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
SYDE1-201ENST00000342784 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
SYDE1-201ENST00000342784 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
SYDE1-201ENST00000342784 GGT6Q6P531 493 aa16.97■□□□□ 0.31
SYDE1-201ENST00000342784 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
SYDE1-201ENST00000342784 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
SYDE1-201ENST00000342784 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
SYDE1-201ENST00000342784 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms