RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
TMEM248-201ENST00000341567 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
TMEM248-201ENST00000341567 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
TMEM248-201ENST00000341567 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.29
TMEM248-201ENST00000341567 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.29
TMEM248-201ENST00000341567 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.29
TMEM248-201ENST00000341567 ADGRL1O94910 1474 aa16.83■□□□□ 0.28
TMEM248-201ENST00000341567 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
TMEM248-201ENST00000341567 NPHP1O15259 732 aa16.82■□□□□ 0.28
TMEM248-201ENST00000341567 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
TMEM248-201ENST00000341567 TEFQ10587 303 aa16.81■□□□□ 0.28
TMEM248-201ENST00000341567 SULT6B1Q6IMI4 303 aa16.81■□□□□ 0.28
TMEM248-201ENST00000341567 CFAP43Q8NDM7 1665 aa16.8■□□□□ 0.28
TMEM248-201ENST00000341567 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
TMEM248-201ENST00000341567 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
TMEM248-201ENST00000341567 KIF14Q15058 1648 aa16.8■□□□□ 0.28
TMEM248-201ENST00000341567 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
TMEM248-201ENST00000341567 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
TMEM248-201ENST00000341567 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
TMEM248-201ENST00000341567 RAPGEF6Q8TEU7 1601 aa16.79■□□□□ 0.28
TMEM248-201ENST00000341567 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
TMEM248-201ENST00000341567 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
TMEM248-201ENST00000341567 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
TMEM248-201ENST00000341567 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
TMEM248-201ENST00000341567 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
TMEM248-201ENST00000341567 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
TMEM248-201ENST00000341567 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
TMEM248-201ENST00000341567 FANCAO15360 1455 aa16.77■□□□□ 0.28
TMEM248-201ENST00000341567 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
TMEM248-201ENST00000341567 WWC1Q8IX03 1113 aa16.77■□□□□ 0.27
TMEM248-201ENST00000341567 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
TMEM248-201ENST00000341567 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
TMEM248-201ENST00000341567 NME9Q86XW9 330 aa16.75■□□□□ 0.27
TMEM248-201ENST00000341567 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
TMEM248-201ENST00000341567 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
TMEM248-201ENST00000341567 NOS1P29475 1434 aa16.74■□□□□ 0.27
TMEM248-201ENST00000341567 HMMRO75330 724 aa16.74■□□□□ 0.27
TMEM248-201ENST00000341567 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
TMEM248-201ENST00000341567 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
TMEM248-201ENST00000341567 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
TMEM248-201ENST00000341567 GNAI1P63096 354 aa16.73■□□□□ 0.27
TMEM248-201ENST00000341567 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
TMEM248-201ENST00000341567 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
TMEM248-201ENST00000341567 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
TMEM248-201ENST00000341567 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
TMEM248-201ENST00000341567 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
TMEM248-201ENST00000341567 MAGI3Q5TCQ9 1506 aa16.71■□□□□ 0.27
TMEM248-201ENST00000341567 SLFN5Q08AF3 891 aa16.71■□□□□ 0.27
TMEM248-201ENST00000341567 TESK2Q96S53 571 aa16.71■□□□□ 0.27
TMEM248-201ENST00000341567 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
TMEM248-201ENST00000341567 TWISTNBQ3B726 338 aaPredicted RBP16.7■□□□□ 0.26
TMEM248-201ENST00000341567 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
TMEM248-201ENST00000341567 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
TMEM248-201ENST00000341567 DDX11L8A8MPP1 907 aa16.69■□□□□ 0.26
TMEM248-201ENST00000341567 MCCP23508 829 aa16.69■□□□□ 0.26
TMEM248-201ENST00000341567 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
TMEM248-201ENST00000341567 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
TMEM248-201ENST00000341567 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
TMEM248-201ENST00000341567 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
TMEM248-201ENST00000341567 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
TMEM248-201ENST00000341567 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
TMEM248-201ENST00000341567 MCM10Q7L590 875 aa16.67■□□□□ 0.26
TMEM248-201ENST00000341567 PLCH2O75038 1416 aa16.67■□□□□ 0.26
TMEM248-201ENST00000341567 API5Q9BZZ5 524 aaKnown RBP16.67■□□□□ 0.26
TMEM248-201ENST00000341567 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
TMEM248-201ENST00000341567 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
TMEM248-201ENST00000341567 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
TMEM248-201ENST00000341567 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
TMEM248-201ENST00000341567 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
TMEM248-201ENST00000341567 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
TMEM248-201ENST00000341567 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 EVA1CP58658 441 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
TMEM248-201ENST00000341567 THEMISQ8N1K5 641 aaPredicted RBP16.64■□□□□ 0.25
TMEM248-201ENST00000341567 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
TMEM248-201ENST00000341567 TRAK2O60296 914 aa16.64■□□□□ 0.25
TMEM248-201ENST00000341567 ABCA8O94911 1581 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
TMEM248-201ENST00000341567 TAF7LQ5H9L4 462 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 DRC7Q8IY82 874 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 PZPP20742 1482 aa16.63■□□□□ 0.25
TMEM248-201ENST00000341567 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 ATF3P18847 181 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
TMEM248-201ENST00000341567 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
TMEM248-201ENST00000341567 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
TMEM248-201ENST00000341567 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
TMEM248-201ENST00000341567 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
TMEM248-201ENST00000341567 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
TMEM248-201ENST00000341567 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms