RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 TERF1P54274 439 aa11.87□□□□□ -0.51
NECAP1-201ENST00000339754 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 PLA2R1Q13018 1463 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
NECAP1-201ENST00000339754 CCDC141Q6ZP82 1450 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
NECAP1-201ENST00000339754 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
NECAP1-201ENST00000339754 ZSCAN30Q86W11 494 aa11.85□□□□□ -0.51
NECAP1-201ENST00000339754 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-201ENST00000339754 FAM135AQ9P2D6 1515 aa11.85□□□□□ -0.51
NECAP1-201ENST00000339754 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
NECAP1-201ENST00000339754 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
NECAP1-201ENST00000339754 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
NECAP1-201ENST00000339754 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-201ENST00000339754 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 ASXL1Q8IXJ9 1541 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 MYO5CQ9NQX4 1742 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
NECAP1-201ENST00000339754 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
NECAP1-201ENST00000339754 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
NECAP1-201ENST00000339754 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
NECAP1-201ENST00000339754 SNX21Q969T3 373 aa11.82□□□□□ -0.52
NECAP1-201ENST00000339754 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-201ENST00000339754 PLCH2O75038 1416 aa11.82□□□□□ -0.52
NECAP1-201ENST00000339754 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-201ENST00000339754 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
NECAP1-201ENST00000339754 SCAPERQ9BY12 1400 aa11.82□□□□□ -0.52
NECAP1-201ENST00000339754 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
NECAP1-201ENST00000339754 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
NECAP1-201ENST00000339754 SYNMO15061 1565 aa11.81□□□□□ -0.52
NECAP1-201ENST00000339754 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
NECAP1-201ENST00000339754 RBM25P49756 843 aaKnown RBP11.8□□□□□ -0.52
NECAP1-201ENST00000339754 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
NECAP1-201ENST00000339754 PTMSP20962 102 aa11.79□□□□□ -0.52
NECAP1-201ENST00000339754 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
NECAP1-201ENST00000339754 MSNP26038 577 aaKnown RBP11.78□□□□□ -0.52
NECAP1-201ENST00000339754 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
NECAP1-201ENST00000339754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
NECAP1-201ENST00000339754 IBTKQ9P2D0 1353 aaPredicted RBP11.78□□□□□ -0.52
NECAP1-201ENST00000339754 CDCA8Q53HL2 280 aa11.77□□□□□ -0.52
NECAP1-201ENST00000339754 SMAP1Q8IYB5 467 aaPredicted RBP11.77□□□□□ -0.52
NECAP1-201ENST00000339754 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-201ENST00000339754 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.53
NECAP1-201ENST00000339754 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
NECAP1-201ENST00000339754 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
NECAP1-201ENST00000339754 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
NECAP1-201ENST00000339754 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
NECAP1-201ENST00000339754 MYOM1P52179 1685 aa11.77□□□□□ -0.53
NECAP1-201ENST00000339754 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
NECAP1-201ENST00000339754 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
NECAP1-201ENST00000339754 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
NECAP1-201ENST00000339754 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
NECAP1-201ENST00000339754 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
NECAP1-201ENST00000339754 KIF2CQ99661 725 aa11.75□□□□□ -0.53
NECAP1-201ENST00000339754 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
NECAP1-201ENST00000339754 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-201ENST00000339754 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
NECAP1-201ENST00000339754 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
NECAP1-201ENST00000339754 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
NECAP1-201ENST00000339754 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 ABCC1P33527 1531 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 UQCRHLA0A096LP55 91 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
NECAP1-201ENST00000339754 UQCRHP07919 91 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-201ENST00000339754 SSFA2P28290 1259 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 ZNF445P59923 1031 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 PDLIM2Q96JY6 352 aa11.74□□□□□ -0.53
NECAP1-201ENST00000339754 RRP7AQ9Y3A4 280 aaKnown RBP11.74□□□□□ -0.53
NECAP1-201ENST00000339754 ATP10AO60312 1499 aa11.73□□□□□ -0.53
NECAP1-201ENST00000339754 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
NECAP1-201ENST00000339754 XPCQ01831 940 aaPredicted RBP11.73□□□□□ -0.53
NECAP1-201ENST00000339754 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
NECAP1-201ENST00000339754 ARHGAP31Q2M1Z3 1444 aa11.73□□□□□ -0.53
NECAP1-201ENST00000339754 DYNC1I1O14576 645 aa11.73□□□□□ -0.53
NECAP1-201ENST00000339754 MTERF4Q7Z6M4 381 aaKnown RBP11.73□□□□□ -0.53
NECAP1-201ENST00000339754 UNC13BO14795 1591 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
NECAP1-201ENST00000339754 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-201ENST00000339754 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
NECAP1-201ENST00000339754 KANK1Q14678 1352 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
NECAP1-201ENST00000339754 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
NECAP1-201ENST00000339754 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
NECAP1-201ENST00000339754 FANCAO15360 1455 aa11.71□□□□□ -0.53
NECAP1-201ENST00000339754 DUOX2Q9NRD8 1548 aa11.71□□□□□ -0.54
NECAP1-201ENST00000339754 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.54
NECAP1-201ENST00000339754 SCAF11Q99590 1463 aaKnown RBP11.71□□□□□ -0.54
NECAP1-201ENST00000339754 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.54
NECAP1-201ENST00000339754 RBSNQ9H1K0 784 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms