RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 C3P01024 1663 aa23.06■■□□□ 1.28
ATAD3A-201ENST00000339113 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
ATAD3A-201ENST00000339113 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
ATAD3A-201ENST00000339113 LTKP29376 864 aa23.04■■□□□ 1.28
ATAD3A-201ENST00000339113 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
ATAD3A-201ENST00000339113 NSD3Q9BZ95 1437 aa23.04■■□□□ 1.28
ATAD3A-201ENST00000339113 FER1L4A9Z1Z3 1794 aa23.04■■□□□ 1.28
ATAD3A-201ENST00000339113 NLRP1Q9C000 1473 aa23.03■■□□□ 1.28
ATAD3A-201ENST00000339113 FKBP8Q14318 412 aa23.03■■□□□ 1.28
ATAD3A-201ENST00000339113 PLEKHH1Q9ULM0 1364 aa23.03■■□□□ 1.28
ATAD3A-201ENST00000339113 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
ATAD3A-201ENST00000339113 BCANQ96GW7 911 aa23.02■■□□□ 1.28
ATAD3A-201ENST00000339113 DLC1Q96QB1 1528 aa22.99■■□□□ 1.27
ATAD3A-201ENST00000339113 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
ATAD3A-201ENST00000339113 TXNDC2Q86VQ3 553 aa22.98■■□□□ 1.27
ATAD3A-201ENST00000339113 ANKRD36BQ8N2N9 1353 aa22.97■■□□□ 1.27
ATAD3A-201ENST00000339113 NEFLP07196 543 aa22.97■■□□□ 1.27
ATAD3A-201ENST00000339113 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
ATAD3A-201ENST00000339113 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
ATAD3A-201ENST00000339113 ATAD2Q6PL18 1390 aa22.93■■□□□ 1.26
ATAD3A-201ENST00000339113 PLEKHG1Q9ULL1 1385 aa22.93■■□□□ 1.26
ATAD3A-201ENST00000339113 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
ATAD3A-201ENST00000339113 A0A1W2PP64 1363 aa22.93■■□□□ 1.26
ATAD3A-201ENST00000339113 CGNL1Q0VF96 1302 aa22.92■■□□□ 1.26
ATAD3A-201ENST00000339113 MORC1Q86VD1 984 aa22.92■■□□□ 1.26
ATAD3A-201ENST00000339113 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
ATAD3A-201ENST00000339113 SLC26A8Q96RN1 970 aa22.91■■□□□ 1.26
ATAD3A-201ENST00000339113 EID1Q9Y6B2 187 aa22.91■■□□□ 1.26
ATAD3A-201ENST00000339113 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
ATAD3A-201ENST00000339113 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
ATAD3A-201ENST00000339113 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
ATAD3A-201ENST00000339113 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
ATAD3A-201ENST00000339113 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
ATAD3A-201ENST00000339113 SLIT1O75093 1534 aa22.89■■□□□ 1.26
ATAD3A-201ENST00000339113 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
ATAD3A-201ENST00000339113 TECPR2O15040 1411 aa22.89■■□□□ 1.25
ATAD3A-201ENST00000339113 INSRP06213 1382 aa22.89■■□□□ 1.25
ATAD3A-201ENST00000339113 SMG6Q86US8 1419 aaKnown RBP22.88■■□□□ 1.25
ATAD3A-201ENST00000339113 SIRT1Q96EB6 747 aa22.88■■□□□ 1.25
ATAD3A-201ENST00000339113 WDR43Q15061 677 aaKnown RBP eCLIP22.88■■□□□ 1.25
ATAD3A-201ENST00000339113 USP32Q8NFA0 1604 aa22.88■■□□□ 1.25
ATAD3A-201ENST00000339113 FAM135BQ49AJ0 1406 aa22.87■■□□□ 1.25
ATAD3A-201ENST00000339113 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
ATAD3A-201ENST00000339113 ROBO2Q9HCK4 1378 aa22.87■■□□□ 1.25
ATAD3A-201ENST00000339113 MED14O60244 1454 aa22.87■■□□□ 1.25
ATAD3A-201ENST00000339113 RIMS1Q86UR5 1692 aaKnown RBP22.86■■□□□ 1.25
ATAD3A-201ENST00000339113 WASLO00401 505 aaPredicted RBP22.86■■□□□ 1.25
ATAD3A-201ENST00000339113 TERF2IPQ9NYB0 399 aa22.86■■□□□ 1.25
ATAD3A-201ENST00000339113 IRX6P78412 446 aaPredicted RBP22.85■■□□□ 1.25
ATAD3A-201ENST00000339113 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
ATAD3A-201ENST00000339113 CPS1P31327 1500 aa22.84■■□□□ 1.25
ATAD3A-201ENST00000339113 PTPRUQ92729 1446 aa22.84■■□□□ 1.25
ATAD3A-201ENST00000339113 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
ATAD3A-201ENST00000339113 GGNBP2Q9H3C7 697 aa22.82■■□□□ 1.24
ATAD3A-201ENST00000339113 FYB1O15117 783 aa22.81■■□□□ 1.24
ATAD3A-201ENST00000339113 NSD2O96028 1365 aa22.81■■□□□ 1.24
ATAD3A-201ENST00000339113 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
ATAD3A-201ENST00000339113 NCKAP5LQ9HCH0 1330 aa22.81■■□□□ 1.24
ATAD3A-201ENST00000339113 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
ATAD3A-201ENST00000339113 TBX22Q9Y458 520 aa22.8■■□□□ 1.24
ATAD3A-201ENST00000339113 MTHFSP49914 203 aa22.8■■□□□ 1.24
ATAD3A-201ENST00000339113 ADAMTSL3P82987 1691 aa22.8■■□□□ 1.24
ATAD3A-201ENST00000339113 CEP170BQ9Y4F5 1589 aaPredicted RBP22.79■■□□□ 1.24
ATAD3A-201ENST00000339113 NUDT16Q96DE0 195 aaKnown RBP22.79■■□□□ 1.24
ATAD3A-201ENST00000339113 CDCA7LQ96GN5 454 aa22.79■■□□□ 1.24
ATAD3A-201ENST00000339113 AMOTL2Q9Y2J4 779 aa22.79■■□□□ 1.24
ATAD3A-201ENST00000339113 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
ATAD3A-201ENST00000339113 PPIP5K1Q6PFW1 1433 aa22.75■■□□□ 1.23
ATAD3A-201ENST00000339113 PRR36Q9H6K5 1346 aa22.75■■□□□ 1.23
ATAD3A-201ENST00000339113 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
ATAD3A-201ENST00000339113 PDE3BQ13370 1112 aa22.74■■□□□ 1.23
ATAD3A-201ENST00000339113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
ATAD3A-201ENST00000339113 ATP7BP35670 1465 aa22.74■■□□□ 1.23
ATAD3A-201ENST00000339113 CCDC61Q9Y6R9 512 aa22.74■■□□□ 1.23
ATAD3A-201ENST00000339113 CPSF1Q10570 1443 aaKnown RBP22.72■■□□□ 1.23
ATAD3A-201ENST00000339113 APAF1O14727 1248 aa22.7■■□□□ 1.22
ATAD3A-201ENST00000339113 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.22
ATAD3A-201ENST00000339113 SHPRHQ149N8 1683 aa22.7■■□□□ 1.22
ATAD3A-201ENST00000339113 NUTM2FA1L443 756 aa22.7■■□□□ 1.22
ATAD3A-201ENST00000339113 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
ATAD3A-201ENST00000339113 CFAP53Q96M91 514 aa22.68■■□□□ 1.22
ATAD3A-201ENST00000339113 ZNF521Q96K83 1311 aa22.68■■□□□ 1.22
ATAD3A-201ENST00000339113 ANKLE2Q86XL3 938 aa22.67■■□□□ 1.22
ATAD3A-201ENST00000339113 ADGRB2O60241 1585 aa22.67■■□□□ 1.22
ATAD3A-201ENST00000339113 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
ATAD3A-201ENST00000339113 FBLN1P23142 703 aa22.66■■□□□ 1.22
ATAD3A-201ENST00000339113 KCNA6P17658 529 aa22.65■■□□□ 1.22
ATAD3A-201ENST00000339113 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
ATAD3A-201ENST00000339113 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
ATAD3A-201ENST00000339113 ANKRD26Q9UPS8 1709 aa22.65■■□□□ 1.22
ATAD3A-201ENST00000339113 CDC42BPGQ6DT37 1551 aa22.65■■□□□ 1.22
ATAD3A-201ENST00000339113 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.22
ATAD3A-201ENST00000339113 NME9Q86XW9 330 aa22.64■■□□□ 1.22
ATAD3A-201ENST00000339113 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
ATAD3A-201ENST00000339113 KIF20BQ96Q89 1820 aa22.63■■□□□ 1.21
ATAD3A-201ENST00000339113 RCAN3Q9UKA8 241 aa22.62■■□□□ 1.21
ATAD3A-201ENST00000339113 SETD1BQ9UPS6 1966 aaKnown RBP22.61■■□□□ 1.21
ATAD3A-201ENST00000339113 XRN1Q8IZH2 1706 aaKnown RBP22.61■■□□□ 1.21
ATAD3A-201ENST00000339113 FANCIQ9NVI1 1328 aa22.61■■□□□ 1.21
ATAD3A-201ENST00000339113 ZNF692Q9BU19 519 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms