RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LAS1LQ9Y4W2 734 aaKnown RBP24.71■■□□□ 1.55
PSPC1-201ENST00000338910 KDM5AP29375 1690 aaKnown RBP24.71■■□□□ 1.55
PSPC1-201ENST00000338910 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
PSPC1-201ENST00000338910 ZMYM3Q14202 1370 aa24.7■■□□□ 1.54
PSPC1-201ENST00000338910 SBNO2Q9Y2G9 1366 aa24.69■■□□□ 1.54
PSPC1-201ENST00000338910 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
PSPC1-201ENST00000338910 MYOM1P52179 1685 aa24.69■■□□□ 1.54
PSPC1-201ENST00000338910 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
PSPC1-201ENST00000338910 RCAN3Q9UKA8 241 aa24.67■■□□□ 1.54
PSPC1-201ENST00000338910 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
PSPC1-201ENST00000338910 CARD14Q9BXL6 1004 aa24.65■■□□□ 1.54
PSPC1-201ENST00000338910 ASXL1Q8IXJ9 1541 aa24.65■■□□□ 1.54
PSPC1-201ENST00000338910 QRICH2Q9H0J4 1663 aa24.65■■□□□ 1.54
PSPC1-201ENST00000338910 A2ML1A8K2U0 1454 aa24.63■■□□□ 1.53
PSPC1-201ENST00000338910 STK26Q9P289 416 aa24.63■■□□□ 1.53
PSPC1-201ENST00000338910 RTN4Q9NQC3 1192 aaKnown RBP24.63■■□□□ 1.53
PSPC1-201ENST00000338910 ADAMTS8Q9UP79 889 aa24.62■■□□□ 1.53
PSPC1-201ENST00000338910 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
PSPC1-201ENST00000338910 SLC12A5Q9H2X9 1139 aa24.6■■□□□ 1.53
PSPC1-201ENST00000338910 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
PSPC1-201ENST00000338910 PDE3BQ13370 1112 aa24.59■■□□□ 1.53
PSPC1-201ENST00000338910 NPC1L1Q9UHC9 1359 aa24.58■■□□□ 1.53
PSPC1-201ENST00000338910 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
PSPC1-201ENST00000338910 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
PSPC1-201ENST00000338910 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
PSPC1-201ENST00000338910 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
PSPC1-201ENST00000338910 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
PSPC1-201ENST00000338910 YTHDC2Q9H6S0 1430 aaKnown RBP24.53■■□□□ 1.52
PSPC1-201ENST00000338910 TNRQ92752 1358 aa24.53■■□□□ 1.52
PSPC1-201ENST00000338910 EVC2Q86UK5 1308 aa24.53■■□□□ 1.52
PSPC1-201ENST00000338910 DDRGK1Q96HY6 314 aa24.53■■□□□ 1.52
PSPC1-201ENST00000338910 INSRP06213 1382 aa24.51■■□□□ 1.51
PSPC1-201ENST00000338910 PRAM1Q96QH2 718 aa24.51■■□□□ 1.51
PSPC1-201ENST00000338910 CEBPAP49715 358 aaPredicted RBP24.5■■□□□ 1.51
PSPC1-201ENST00000338910 TULP4Q9NRJ4 1543 aa24.5■■□□□ 1.51
PSPC1-201ENST00000338910 PTPRMP28827 1452 aa24.49■■□□□ 1.51
PSPC1-201ENST00000338910 CABP2Q9NPB3 220 aa24.49■■□□□ 1.51
PSPC1-201ENST00000338910 POGKQ9P215 609 aa24.49■■□□□ 1.51
PSPC1-201ENST00000338910 NSD3Q9BZ95 1437 aa24.48■■□□□ 1.51
PSPC1-201ENST00000338910 GSE1Q14687 1217 aa24.46■■□□□ 1.51
PSPC1-201ENST00000338910 MINK1Q8N4C8 1332 aaPredicted RBP24.46■■□□□ 1.51
PSPC1-201ENST00000338910 TNNT2P45379 298 aaPredicted RBP24.46■■□□□ 1.51
PSPC1-201ENST00000338910 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.45■■□□□ 1.51
PSPC1-201ENST00000338910 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
PSPC1-201ENST00000338910 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
PSPC1-201ENST00000338910 PUS7Q96PZ0 661 aaKnown RBP24.44■■□□□ 1.5
PSPC1-201ENST00000338910 BRPF3Q9ULD4 1205 aa24.43■■□□□ 1.5
PSPC1-201ENST00000338910 PLIN1O60240 522 aa24.43■■□□□ 1.5
PSPC1-201ENST00000338910 SRPK2P78362 688 aaKnown RBP24.43■■□□□ 1.5
PSPC1-201ENST00000338910 NFKBIBQ15653 356 aa24.43■■□□□ 1.5
PSPC1-201ENST00000338910 SKAP1Q86WV1 359 aa24.43■■□□□ 1.5
PSPC1-201ENST00000338910 CCDC146Q8IYE0 955 aa24.42■■□□□ 1.5
PSPC1-201ENST00000338910 CRBNQ96SW2 442 aa24.42■■□□□ 1.5
PSPC1-201ENST00000338910 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.41■■□□□ 1.5
PSPC1-201ENST00000338910 HDGFP51858 240 aaKnown RBP24.4■■□□□ 1.5
PSPC1-201ENST00000338910 SETD1AO15047 1707 aaKnown RBP24.4■■□□□ 1.5
PSPC1-201ENST00000338910 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
PSPC1-201ENST00000338910 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
PSPC1-201ENST00000338910 UBR1Q8IWV7 1749 aa24.39■■□□□ 1.5
PSPC1-201ENST00000338910 NRXN3Q9Y4C0 1643 aa24.39■■□□□ 1.5
PSPC1-201ENST00000338910 METP08581 1390 aa24.38■■□□□ 1.49
PSPC1-201ENST00000338910 PLEKHH1Q9ULM0 1364 aa24.38■■□□□ 1.49
PSPC1-201ENST00000338910 CGNL1Q0VF96 1302 aa24.38■■□□□ 1.49
PSPC1-201ENST00000338910 KDM2BQ8NHM5 1336 aa24.36■■□□□ 1.49
PSPC1-201ENST00000338910 ANKRD36BQ8N2N9 1353 aa24.36■■□□□ 1.49
PSPC1-201ENST00000338910 C3P01024 1663 aa24.35■■□□□ 1.49
PSPC1-201ENST00000338910 APAF1O14727 1248 aa24.34■■□□□ 1.49
PSPC1-201ENST00000338910 ABCC11Q96J66 1382 aa24.34■■□□□ 1.49
PSPC1-201ENST00000338910 FER1L4A9Z1Z3 1794 aa24.34■■□□□ 1.49
PSPC1-201ENST00000338910 FRAT1Q92837 279 aaPredicted RBP24.34■■□□□ 1.49
PSPC1-201ENST00000338910 CDK19Q9BWU1 502 aa24.34■■□□□ 1.49
PSPC1-201ENST00000338910 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
PSPC1-201ENST00000338910 LTKP29376 864 aa24.32■■□□□ 1.48
PSPC1-201ENST00000338910 SLC4A3P48751 1232 aa24.32■■□□□ 1.48
PSPC1-201ENST00000338910 DLC1Q96QB1 1528 aa24.32■■□□□ 1.48
PSPC1-201ENST00000338910 POLR3AO14802 1390 aaPredicted RBP24.31■■□□□ 1.48
PSPC1-201ENST00000338910 ATAD2Q6PL18 1390 aa24.31■■□□□ 1.48
PSPC1-201ENST00000338910 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
PSPC1-201ENST00000338910 A0A1W2PP64 1363 aa24.3■■□□□ 1.48
PSPC1-201ENST00000338910 MTHFSP49914 203 aa24.3■■□□□ 1.48
PSPC1-201ENST00000338910 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
PSPC1-201ENST00000338910 GOLGA2Q08379 1002 aa24.3■■□□□ 1.48
PSPC1-201ENST00000338910 C20orf194Q5TEA3 1177 aa24.29■■□□□ 1.48
PSPC1-201ENST00000338910 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
PSPC1-201ENST00000338910 CENPQQ7L2Z9 268 aaPredicted RBP24.27■■□□□ 1.48
PSPC1-201ENST00000338910 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
PSPC1-201ENST00000338910 DUSP27Q5VZP5 1158 aa24.27■■□□□ 1.48
PSPC1-201ENST00000338910 DAXXQ9UER7 740 aaPredicted RBP24.27■■□□□ 1.48
PSPC1-201ENST00000338910 USP32Q8NFA0 1604 aa24.27■■□□□ 1.48
PSPC1-201ENST00000338910 C8orf34Q49A92 452 aa24.26■■□□□ 1.47
PSPC1-201ENST00000338910 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
PSPC1-201ENST00000338910 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
PSPC1-201ENST00000338910 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
PSPC1-201ENST00000338910 ADAMTS13Q76LX8 1427 aa24.25■■□□□ 1.47
PSPC1-201ENST00000338910 GGNBP2Q9H3C7 697 aa24.24■■□□□ 1.47
PSPC1-201ENST00000338910 CD163L1Q9NR16 1453 aa24.23■■□□□ 1.47
PSPC1-201ENST00000338910 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
PSPC1-201ENST00000338910 PLEKHG1Q9ULL1 1385 aa24.23■■□□□ 1.47
PSPC1-201ENST00000338910 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
PSPC1-201ENST00000338910 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms