RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 KNDC1Q76NI1 1749 aa37.86■■■■□ 3.65
SCARA3-202ENST00000337221 USP32Q8NFA0 1604 aa37.85■■■■□ 3.65
SCARA3-202ENST00000337221 SLIT1O75093 1534 aa37.84■■■■□ 3.65
SCARA3-202ENST00000337221 PLPPR3Q6T4P5 718 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 ARHGAP23Q9P227 1491 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 PLEKHG1Q9ULL1 1385 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 ADAMTS13Q76LX8 1427 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 NINLQ9Y2I6 1382 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 LTKP29376 864 aa37.83■■■■□ 3.65
SCARA3-202ENST00000337221 ANKRD36BQ8N2N9 1353 aa37.82■■■■□ 3.64
SCARA3-202ENST00000337221 RIMS1Q86UR5 1692 aaKnown RBP37.82■■■■□ 3.64
SCARA3-202ENST00000337221 PLEKHH1Q9ULM0 1364 aa37.81■■■■□ 3.64
SCARA3-202ENST00000337221 SRPK2P78362 688 aaKnown RBP37.81■■■■□ 3.64
SCARA3-202ENST00000337221 TECPR2O15040 1411 aa37.8■■■■□ 3.64
SCARA3-202ENST00000337221 ATAD2Q6PL18 1390 aa37.8■■■■□ 3.64
SCARA3-202ENST00000337221 WAPLQ7Z5K2 1190 aa37.79■■■■□ 3.64
SCARA3-202ENST00000337221 INSRP06213 1382 aa37.78■■■■□ 3.64
SCARA3-202ENST00000337221 TXNDC2Q86VQ3 553 aa37.77■■■■□ 3.64
SCARA3-202ENST00000337221 ADAMTSL3P82987 1691 aa37.76■■■■□ 3.64
SCARA3-202ENST00000337221 CPS1P31327 1500 aa37.76■■■■□ 3.64
SCARA3-202ENST00000337221 BCANQ96GW7 911 aa37.76■■■■□ 3.64
SCARA3-202ENST00000337221 SIRT1Q96EB6 747 aa37.75■■■■□ 3.63
SCARA3-202ENST00000337221 FAM135BQ49AJ0 1406 aa37.74■■■■□ 3.63
SCARA3-202ENST00000337221 CDK19Q9BWU1 502 aa37.74■■■■□ 3.63
SCARA3-202ENST00000337221 MED14O60244 1454 aa37.74■■■■□ 3.63
SCARA3-202ENST00000337221 EID1Q9Y6B2 187 aa37.73■■■■□ 3.63
SCARA3-202ENST00000337221 THEMISQ8N1K5 641 aaPredicted RBP37.71■■■■□ 3.63
SCARA3-202ENST00000337221 BLMP54132 1417 aaPredicted RBP37.7■■■■□ 3.63
SCARA3-202ENST00000337221 SUPT16HQ9Y5B9 1047 aaKnown RBP37.69■■■■□ 3.62
SCARA3-202ENST00000337221 A0A1W2PP64 1363 aa37.69■■■■□ 3.62
SCARA3-202ENST00000337221 CGNL1Q0VF96 1302 aa37.68■■■■□ 3.62
SCARA3-202ENST00000337221 CEP170BQ9Y4F5 1589 aaPredicted RBP37.68■■■■□ 3.62
SCARA3-202ENST00000337221 CD163L1Q9NR16 1453 aa37.67■■■■□ 3.62
SCARA3-202ENST00000337221 NSD2O96028 1365 aa37.63■■■■□ 3.61
SCARA3-202ENST00000337221 MORC1Q86VD1 984 aa37.62■■■■□ 3.61
SCARA3-202ENST00000337221 SENP3-EIF4A1A0A087X0R7 540 aa37.6■■■■□ 3.61
SCARA3-202ENST00000337221 TERF2IPQ9NYB0 399 aa37.6■■■■□ 3.61
SCARA3-202ENST00000337221 ROBO2Q9HCK4 1378 aa37.6■■■■□ 3.61
SCARA3-202ENST00000337221 SMG6Q86US8 1419 aaKnown RBP37.6■■■■□ 3.61
SCARA3-202ENST00000337221 WASLO00401 505 aaPredicted RBP37.58■■■■□ 3.61
SCARA3-202ENST00000337221 ADAMTS8Q9UP79 889 aa37.58■■■■□ 3.61
SCARA3-202ENST00000337221 SLC26A8Q96RN1 970 aa37.57■■■■□ 3.61
SCARA3-202ENST00000337221 PTPRUQ92729 1446 aa37.57■■■■□ 3.61
SCARA3-202ENST00000337221 DIP2AQ14689 1571 aa37.57■■■■□ 3.6
SCARA3-202ENST00000337221 TBX22Q9Y458 520 aa37.56■■■■□ 3.6
SCARA3-202ENST00000337221 ZNF142P52746 1687 aaPredicted RBP37.56■■■■□ 3.6
SCARA3-202ENST00000337221 CABP1Q9NZU7 370 aa37.55■■■■□ 3.6
SCARA3-202ENST00000337221 WDR43Q15061 677 aaKnown RBP eCLIP37.55■■■■□ 3.6
SCARA3-202ENST00000337221 FKBP8Q14318 412 aa37.54■■■■□ 3.6
SCARA3-202ENST00000337221 NEFLP07196 543 aa37.53■■■■□ 3.6
SCARA3-202ENST00000337221 POLR3AO14802 1390 aaPredicted RBP37.53■■■■□ 3.6
SCARA3-202ENST00000337221 ATP7BP35670 1465 aa37.53■■■■□ 3.6
SCARA3-202ENST00000337221 HDGFL2Q7Z4V5 671 aaPredicted RBP37.51■■■■□ 3.6
SCARA3-202ENST00000337221 ADGRB2O60241 1585 aa37.51■■■■□ 3.6
SCARA3-202ENST00000337221 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.5■■■■□ 3.59
SCARA3-202ENST00000337221 NUDCQ9Y266 331 aa37.5■■■■□ 3.59
SCARA3-202ENST00000337221 ANKRD26Q9UPS8 1709 aa37.49■■■■□ 3.59
SCARA3-202ENST00000337221 SETD1BQ9UPS6 1966 aaKnown RBP37.47■■■■□ 3.59
SCARA3-202ENST00000337221 TNNT2P45379 298 aaPredicted RBP37.46■■■■□ 3.59
SCARA3-202ENST00000337221 PPIP5K1Q6PFW1 1433 aa37.44■■■■□ 3.58
SCARA3-202ENST00000337221 KIF20BQ96Q89 1820 aa37.43■■■■□ 3.58
SCARA3-202ENST00000337221 PTCH1Q13635 1447 aa37.43■■■■□ 3.58
SCARA3-202ENST00000337221 AMOTL2Q9Y2J4 779 aa37.43■■■■□ 3.58
SCARA3-202ENST00000337221 FYB1O15117 783 aa37.42■■■■□ 3.58
SCARA3-202ENST00000337221 NUDT16Q96DE0 195 aaKnown RBP37.42■■■■□ 3.58
SCARA3-202ENST00000337221 SHPRHQ149N8 1683 aa37.41■■■■□ 3.58
SCARA3-202ENST00000337221 CPSF1Q10570 1443 aaKnown RBP37.41■■■■□ 3.58
SCARA3-202ENST00000337221 SALL2Q9Y467 1007 aaPredicted RBP37.41■■■■□ 3.58
SCARA3-202ENST00000337221 XRN1Q8IZH2 1706 aaKnown RBP37.41■■■■□ 3.58
SCARA3-202ENST00000337221 GGNBP2Q9H3C7 697 aa37.4■■■■□ 3.58
SCARA3-202ENST00000337221 PDE3BQ13370 1112 aa37.39■■■■□ 3.58
SCARA3-202ENST00000337221 CDC42BPGQ6DT37 1551 aa37.38■■■■□ 3.57
SCARA3-202ENST00000337221 CCDC61Q9Y6R9 512 aa37.38■■■■□ 3.57
SCARA3-202ENST00000337221 MTHFSP49914 203 aa37.37■■■■□ 3.57
SCARA3-202ENST00000337221 PRR36Q9H6K5 1346 aa37.35■■■■□ 3.57
SCARA3-202ENST00000337221 PIK3R4Q99570 1358 aa37.34■■■■□ 3.57
SCARA3-202ENST00000337221 ANKLE2Q86XL3 938 aa37.33■■■■□ 3.57
SCARA3-202ENST00000337221 MON2Q7Z3U7 1717 aa37.33■■■■□ 3.57
SCARA3-202ENST00000337221 AKAP12Q02952 1782 aa37.32■■■■□ 3.57
SCARA3-202ENST00000337221 TOPAZ1Q8N9V7 1692 aa37.32■■■■□ 3.57
SCARA3-202ENST00000337221 NCKAP5LQ9HCH0 1330 aa37.32■■■■□ 3.57
SCARA3-202ENST00000337221 EDC4Q6P2E9 1401 aaKnown RBP37.32■■■■□ 3.56
SCARA3-202ENST00000337221 ITSN1Q15811 1721 aa37.29■■■■□ 3.56
SCARA3-202ENST00000337221 CFAP53Q96M91 514 aa37.28■■■■□ 3.56
SCARA3-202ENST00000337221 CCDC146Q8IYE0 955 aa37.26■■■■□ 3.56
SCARA3-202ENST00000337221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.26■■■■□ 3.55
SCARA3-202ENST00000337221 CDCA7LQ96GN5 454 aa37.24■■■■□ 3.55
SCARA3-202ENST00000337221 CHD2O14647 1828 aaKnown RBP37.22■■■■□ 3.55
SCARA3-202ENST00000337221 RNF123Q5XPI4 1314 aa37.22■■■■□ 3.55
SCARA3-202ENST00000337221 ZNF521Q96K83 1311 aa37.22■■■■□ 3.55
SCARA3-202ENST00000337221 KCNA6P17658 529 aa37.22■■■■□ 3.55
SCARA3-202ENST00000337221 IRX6P78412 446 aaPredicted RBP37.22■■■■□ 3.55
SCARA3-202ENST00000337221 COL3A1P02461 1466 aaPredicted RBP37.2■■■■□ 3.55
SCARA3-202ENST00000337221 ZNF692Q9BU19 519 aaPredicted RBP37.2■■■■□ 3.55
SCARA3-202ENST00000337221 PLEKHG3A1L390 1219 aa37.18■■■■□ 3.54
SCARA3-202ENST00000337221 APAF1O14727 1248 aa37.18■■■■□ 3.54
SCARA3-202ENST00000337221 NKTRP30414 1462 aaKnown RBP37.17■■■■□ 3.54
SCARA3-202ENST00000337221 NRKQ7Z2Y5 1582 aa37.15■■■■□ 3.54
SCARA3-202ENST00000337221 ERICH6BQ5W0A0 696 aa37.15■■■■□ 3.54
SCARA3-202ENST00000337221 NME9Q86XW9 330 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms