RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
TRIM16-201ENST00000336708 POLR3AO14802 1390 aaPredicted RBP12.96□□□□□ -0.33
TRIM16-201ENST00000336708 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.34
TRIM16-201ENST00000336708 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
TRIM16-201ENST00000336708 PTPRMP28827 1452 aa12.95□□□□□ -0.34
TRIM16-201ENST00000336708 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
TRIM16-201ENST00000336708 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
TRIM16-201ENST00000336708 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
TRIM16-201ENST00000336708 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIM16-201ENST00000336708 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
TRIM16-201ENST00000336708 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
TRIM16-201ENST00000336708 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
TRIM16-201ENST00000336708 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
TRIM16-201ENST00000336708 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
TRIM16-201ENST00000336708 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
TRIM16-201ENST00000336708 NSD2O96028 1365 aa12.92□□□□□ -0.34
TRIM16-201ENST00000336708 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
TRIM16-201ENST00000336708 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
TRIM16-201ENST00000336708 DLC1Q96QB1 1528 aa12.91□□□□□ -0.34
TRIM16-201ENST00000336708 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
TRIM16-201ENST00000336708 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
TRIM16-201ENST00000336708 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
TRIM16-201ENST00000336708 A2ML1A8K2U0 1454 aa12.9□□□□□ -0.34
TRIM16-201ENST00000336708 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
TRIM16-201ENST00000336708 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
TRIM16-201ENST00000336708 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
TRIM16-201ENST00000336708 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
TRIM16-201ENST00000336708 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
TRIM16-201ENST00000336708 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
TRIM16-201ENST00000336708 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
TRIM16-201ENST00000336708 MED14O60244 1454 aa12.88□□□□□ -0.35
TRIM16-201ENST00000336708 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
TRIM16-201ENST00000336708 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
TRIM16-201ENST00000336708 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
TRIM16-201ENST00000336708 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
TRIM16-201ENST00000336708 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
TRIM16-201ENST00000336708 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
TRIM16-201ENST00000336708 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
TRIM16-201ENST00000336708 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
TRIM16-201ENST00000336708 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
TRIM16-201ENST00000336708 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
TRIM16-201ENST00000336708 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
TRIM16-201ENST00000336708 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
TRIM16-201ENST00000336708 RIMS2Q9UQ26 1411 aa12.84□□□□□ -0.35
TRIM16-201ENST00000336708 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
TRIM16-201ENST00000336708 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
TRIM16-201ENST00000336708 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
TRIM16-201ENST00000336708 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
TRIM16-201ENST00000336708 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
TRIM16-201ENST00000336708 APAF1O14727 1248 aa12.82□□□□□ -0.36
TRIM16-201ENST00000336708 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
TRIM16-201ENST00000336708 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
TRIM16-201ENST00000336708 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
TRIM16-201ENST00000336708 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
TRIM16-201ENST00000336708 E9PSI1 815 aa12.81□□□□□ -0.36
TRIM16-201ENST00000336708 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
TRIM16-201ENST00000336708 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
TRIM16-201ENST00000336708 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
TRIM16-201ENST00000336708 PLIN1O60240 522 aa12.79□□□□□ -0.36
TRIM16-201ENST00000336708 STK26Q9P289 416 aa12.79□□□□□ -0.36
TRIM16-201ENST00000336708 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TRIM16-201ENST00000336708 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
TRIM16-201ENST00000336708 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 ATP7BP35670 1465 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 CPS1P31327 1500 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 TECPR2O15040 1411 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 MTHFSP49914 203 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
TRIM16-201ENST00000336708 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
TRIM16-201ENST00000336708 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
TRIM16-201ENST00000336708 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
TRIM16-201ENST00000336708 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
TRIM16-201ENST00000336708 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
TRIM16-201ENST00000336708 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
TRIM16-201ENST00000336708 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM16-201ENST00000336708 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
TRIM16-201ENST00000336708 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
TRIM16-201ENST00000336708 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM16-201ENST00000336708 POGKQ9P215 609 aa12.76□□□□□ -0.37
TRIM16-201ENST00000336708 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
TRIM16-201ENST00000336708 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 FAM135BQ49AJ0 1406 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 TCERG1O14776 1098 aaKnown RBP12.75□□□□□ -0.37
TRIM16-201ENST00000336708 FYB1O15117 783 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 NPM2Q86SE8 214 aaKnown RBP12.75□□□□□ -0.37
TRIM16-201ENST00000336708 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
TRIM16-201ENST00000336708 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
TRIM16-201ENST00000336708 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
TRIM16-201ENST00000336708 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
TRIM16-201ENST00000336708 TNRQ92752 1358 aa12.74□□□□□ -0.37
TRIM16-201ENST00000336708 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
TRIM16-201ENST00000336708 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
TRIM16-201ENST00000336708 MS4A1P11836 297 aa12.73□□□□□ -0.37
TRIM16-201ENST00000336708 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
TRIM16-201ENST00000336708 METP08581 1390 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms