RNA–Protein interactions for RNA: ENST00000335367.7

AGAP3-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best) BASIC

Gene AGAP3, Length 2,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-201ENST00000335367 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
AGAP3-201ENST00000335367 EFCAB2Q5VUJ9 269 aa28.69■■■□□ 2.18
AGAP3-201ENST00000335367 PTPRTO14522 1441 aa28.69■■■□□ 2.18
AGAP3-201ENST00000335367 ADGRF5Q8IZF2 1346 aa28.67■■■□□ 2.18
AGAP3-201ENST00000335367 TRAK2O60296 914 aa28.67■■■□□ 2.18
AGAP3-201ENST00000335367 SLC24A1O60721 1099 aa28.67■■■□□ 2.18
AGAP3-201ENST00000335367 WDR63Q8IWG1 891 aa28.67■■■□□ 2.18
AGAP3-201ENST00000335367 CHMP5Q9NZZ3 219 aa28.67■■■□□ 2.18
AGAP3-201ENST00000335367 NAP1L5Q96NT1 182 aaPredicted RBP28.66■■■□□ 2.18
AGAP3-201ENST00000335367 SHPRHQ149N8 1683 aa28.66■■■□□ 2.18
AGAP3-201ENST00000335367 MVPQ14764 893 aaKnown RBP28.66■■■□□ 2.18
AGAP3-201ENST00000335367 PHF23Q9BUL5 403 aaPredicted RBP28.66■■■□□ 2.18
AGAP3-201ENST00000335367 SPAG9O60271 1321 aaKnown RBP28.65■■■□□ 2.18
AGAP3-201ENST00000335367 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
AGAP3-201ENST00000335367 NSD3Q9BZ95 1437 aa28.64■■■□□ 2.18
AGAP3-201ENST00000335367 PNNQ9H307 717 aaKnown RBP28.64■■■□□ 2.18
AGAP3-201ENST00000335367 FTSJ3Q8IY81 847 aaKnown RBP28.63■■■□□ 2.17
AGAP3-201ENST00000335367 PLCH2O75038 1416 aa28.62■■■□□ 2.17
AGAP3-201ENST00000335367 KIAA1210Q9ULL0 1709 aa28.62■■■□□ 2.17
AGAP3-201ENST00000335367 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
AGAP3-201ENST00000335367 SLC12A5Q9H2X9 1139 aa28.62■■■□□ 2.17
AGAP3-201ENST00000335367 IQSEC2Q5JU85 1478 aa28.61■■■□□ 2.17
AGAP3-201ENST00000335367 MTHFSP49914 203 aa28.61■■■□□ 2.17
AGAP3-201ENST00000335367 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
AGAP3-201ENST00000335367 ZKSCAN2Q63HK3 967 aa28.6■■■□□ 2.17
AGAP3-201ENST00000335367 CLCN1P35523 988 aa28.6■■■□□ 2.17
AGAP3-201ENST00000335367 DZIP1LQ8IYY4 767 aaKnown RBP28.59■■■□□ 2.17
AGAP3-201ENST00000335367 ABCA6Q8N139 1617 aa28.59■■■□□ 2.17
AGAP3-201ENST00000335367 MYH16Q9H6N6 1097 aa28.58■■■□□ 2.17
AGAP3-201ENST00000335367 MRE11P49959 708 aa28.57■■■□□ 2.16
AGAP3-201ENST00000335367 ABCC1P33527 1531 aa28.57■■■□□ 2.16
AGAP3-201ENST00000335367 UGGT1Q9NYU2 1555 aa28.56■■■□□ 2.16
AGAP3-201ENST00000335367 MAP3K4Q9Y6R4 1608 aa28.56■■■□□ 2.16
AGAP3-201ENST00000335367 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
AGAP3-201ENST00000335367 HSCBQ8IWL3 235 aa28.56■■■□□ 2.16
AGAP3-201ENST00000335367 CCDC27Q2M243 656 aa28.55■■■□□ 2.16
AGAP3-201ENST00000335367 TSR2Q969E8 191 aaKnown RBP28.55■■■□□ 2.16
AGAP3-201ENST00000335367 TRAK1Q9UPV9 953 aa28.54■■■□□ 2.16
AGAP3-201ENST00000335367 ZCCHC11Q5TAX3 1644 aaKnown RBP28.53■■■□□ 2.16
AGAP3-201ENST00000335367 CFAP53Q96M91 514 aa28.53■■■□□ 2.16
AGAP3-201ENST00000335367 GRPEL1Q9HAV7 217 aa28.53■■■□□ 2.16
AGAP3-201ENST00000335367 TET3O43151 1660 aa28.52■■■□□ 2.16
AGAP3-201ENST00000335367 KIF3BO15066 747 aa28.52■■■□□ 2.16
AGAP3-201ENST00000335367 U2AF1L5P0DN76 240 aaPredicted RBP28.52■■■□□ 2.16
AGAP3-201ENST00000335367 U2AF1Q01081 240 aaKnown RBP eCLIP28.52■■■□□ 2.16
AGAP3-201ENST00000335367 SMC4Q9NTJ3 1288 aa28.52■■■□□ 2.16
AGAP3-201ENST00000335367 KANK1Q14678 1352 aa28.52■■■□□ 2.16
AGAP3-201ENST00000335367 ITPRIPQ8IWB1 547 aa28.51■■■□□ 2.15
AGAP3-201ENST00000335367 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
AGAP3-201ENST00000335367 DDX11L8A8MPP1 907 aa28.5■■■□□ 2.15
AGAP3-201ENST00000335367 TRIM27P14373 513 aa28.5■■■□□ 2.15
AGAP3-201ENST00000335367 MYOM2P54296 1465 aa28.48■■■□□ 2.15
AGAP3-201ENST00000335367 ZNF518AQ6AHZ1 1483 aa28.48■■■□□ 2.15
AGAP3-201ENST00000335367 EXOSC9Q06265 439 aaKnown RBP28.48■■■□□ 2.15
AGAP3-201ENST00000335367 HDAC1Q13547 482 aaPredicted RBP28.47■■■□□ 2.15
AGAP3-201ENST00000335367 SBNO2Q9Y2G9 1366 aa28.47■■■□□ 2.15
AGAP3-201ENST00000335367 ZFYVE16Q7Z3T8 1539 aa28.46■■■□□ 2.15
AGAP3-201ENST00000335367 DEPDC5O75140 1603 aa28.46■■■□□ 2.15
AGAP3-201ENST00000335367 CHGAP10645 457 aaKnown RBP28.45■■■□□ 2.14
AGAP3-201ENST00000335367 SSH1Q8WYL5 1049 aa28.45■■■□□ 2.14
AGAP3-201ENST00000335367 DDX19BQ9UMR2 479 aa28.45■■■□□ 2.14
AGAP3-201ENST00000335367 HSP90AA1P07900 732 aaKnown RBP28.44■■■□□ 2.14
AGAP3-201ENST00000335367 ESPNB1AK53 854 aa28.43■■■□□ 2.14
AGAP3-201ENST00000335367 SMC5Q8IY18 1101 aa28.43■■■□□ 2.14
AGAP3-201ENST00000335367 TNPO1Q92973 898 aaKnown RBP28.43■■■□□ 2.14
AGAP3-201ENST00000335367 ERBB4Q15303 1308 aa28.42■■■□□ 2.14
AGAP3-201ENST00000335367 MYO3AQ8NEV4 1616 aa28.42■■■□□ 2.14
AGAP3-201ENST00000335367 KIF1BO60333 1816 aa28.42■■■□□ 2.14
AGAP3-201ENST00000335367 ATF7IPQ6VMQ6 1270 aa28.41■■■□□ 2.14
AGAP3-201ENST00000335367 NOB1Q9ULX3 412 aaKnown RBP28.41■■■□□ 2.14
AGAP3-201ENST00000335367 DDIT3P35638 169 aa28.41■■■□□ 2.14
AGAP3-201ENST00000335367 TMEM132EQ6IEE7 984 aa28.41■■■□□ 2.14
AGAP3-201ENST00000335367 HSP90AA2PQ14568 343 aaPredicted RBP28.4■■■□□ 2.14
AGAP3-201ENST00000335367 GAS2L3Q86XJ1 694 aa28.4■■■□□ 2.14
AGAP3-201ENST00000335367 TMEM57Q8N5G2 664 aa28.4■■■□□ 2.14
AGAP3-201ENST00000335367 GLIPR1L2Q4G1C9 344 aa28.39■■■□□ 2.14
AGAP3-201ENST00000335367 LNPKQ9C0E8 428 aa28.39■■■□□ 2.14
AGAP3-201ENST00000335367 NOS1P29475 1434 aa28.39■■■□□ 2.13
AGAP3-201ENST00000335367 NCOA3Q9Y6Q9 1424 aa28.39■■■□□ 2.13
AGAP3-201ENST00000335367 HSP90AB1P08238 724 aaKnown RBP28.38■■■□□ 2.13
AGAP3-201ENST00000335367 RBM25P49756 843 aaKnown RBP28.38■■■□□ 2.13
AGAP3-201ENST00000335367 CT47B1P0C2W7 299 aaPredicted RBP28.38■■■□□ 2.13
AGAP3-201ENST00000335367 TRIM44Q96DX7 344 aaPredicted RBP28.37■■■□□ 2.13
AGAP3-201ENST00000335367 NEURL4Q96JN8 1562 aa28.37■■■□□ 2.13
AGAP3-201ENST00000335367 U2SURPO15042 1029 aaKnown RBP28.37■■■□□ 2.13
AGAP3-201ENST00000335367 MROH2AA6NES4 1674 aa28.36■■■□□ 2.13
AGAP3-201ENST00000335367 FOXD4L1Q9NU39 408 aa28.36■■■□□ 2.13
AGAP3-201ENST00000335367 VWDEQ8N2E2 1590 aa28.36■■■□□ 2.13
AGAP3-201ENST00000335367 ARAP3Q8WWN8 1544 aa28.36■■■□□ 2.13
AGAP3-201ENST00000335367 ISY1Q9ULR0 285 aaKnown RBP28.36■■■□□ 2.13
AGAP3-201ENST00000335367 SNX21Q969T3 373 aa28.36■■■□□ 2.13
AGAP3-201ENST00000335367 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
AGAP3-201ENST00000335367 ZBTB40Q9NUA8 1239 aa28.35■■■□□ 2.13
AGAP3-201ENST00000335367 NCBP3Q53F19 620 aaKnown RBP28.34■■■□□ 2.13
AGAP3-201ENST00000335367 GBP4Q96PP9 640 aa28.34■■■□□ 2.13
AGAP3-201ENST00000335367 QRICH2Q9H0J4 1663 aa28.34■■■□□ 2.13
AGAP3-201ENST00000335367 TMPOP42166 694 aaKnown RBP28.33■■■□□ 2.13
AGAP3-201ENST00000335367 TRIM35Q9UPQ4 493 aa28.33■■■□□ 2.13
AGAP3-201ENST00000335367 NUCB1Q02818 461 aa28.32■■■□□ 2.12
AGAP3-201ENST00000335367 NRXN1Q9ULB1 1477 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms