RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
UPK3B-202ENST00000334348 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
UPK3B-202ENST00000334348 WWC1Q8IX03 1113 aa20.7■□□□□ 0.9
UPK3B-202ENST00000334348 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
UPK3B-202ENST00000334348 CFAP74Q9C0B2 1584 aa20.7■□□□□ 0.9
UPK3B-202ENST00000334348 PCDHB15Q9Y5E8 787 aa20.69■□□□□ 0.9
UPK3B-202ENST00000334348 MYOM1P52179 1685 aa20.69■□□□□ 0.9
UPK3B-202ENST00000334348 FRMPD1Q5SYB0 1578 aa20.69■□□□□ 0.9
UPK3B-202ENST00000334348 STAC3Q96MF2 364 aa20.68■□□□□ 0.9
UPK3B-202ENST00000334348 PDZRN3Q9UPQ7 1066 aa20.68■□□□□ 0.9
UPK3B-202ENST00000334348 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
UPK3B-202ENST00000334348 NAP1L5Q96NT1 182 aaPredicted RBP20.67■□□□□ 0.9
UPK3B-202ENST00000334348 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
UPK3B-202ENST00000334348 RICTORQ6R327 1708 aa20.67■□□□□ 0.9
UPK3B-202ENST00000334348 PANK2Q9BZ23 570 aa20.66■□□□□ 0.9
UPK3B-202ENST00000334348 SPAG9O60271 1321 aaKnown RBP20.66■□□□□ 0.9
UPK3B-202ENST00000334348 DUOX2Q9NRD8 1548 aa20.66■□□□□ 0.9
UPK3B-202ENST00000334348 MRE11P49959 708 aa20.65■□□□□ 0.9
UPK3B-202ENST00000334348 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
UPK3B-202ENST00000334348 ARXQ96QS3 562 aa20.65■□□□□ 0.9
UPK3B-202ENST00000334348 RWDD1Q9H446 243 aaPredicted RBP20.65■□□□□ 0.9
UPK3B-202ENST00000334348 TRAK2O60296 914 aa20.64■□□□□ 0.89
UPK3B-202ENST00000334348 YEATS2Q9ULM3 1422 aa20.64■□□□□ 0.89
UPK3B-202ENST00000334348 GZF1Q9H116 711 aaPredicted RBP20.64■□□□□ 0.89
UPK3B-202ENST00000334348 POLR3AO14802 1390 aaPredicted RBP20.63■□□□□ 0.89
UPK3B-202ENST00000334348 SLC24A1O60721 1099 aa20.62■□□□□ 0.89
UPK3B-202ENST00000334348 RLBP1P12271 317 aa20.62■□□□□ 0.89
UPK3B-202ENST00000334348 RRP9O43818 475 aaKnown RBP20.61■□□□□ 0.89
UPK3B-202ENST00000334348 SPRYD3Q8NCJ5 442 aa20.61■□□□□ 0.89
UPK3B-202ENST00000334348 ISY1Q9ULR0 285 aaKnown RBP20.61■□□□□ 0.89
UPK3B-202ENST00000334348 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
UPK3B-202ENST00000334348 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
UPK3B-202ENST00000334348 C22orf23Q9BZE7 217 aa20.6■□□□□ 0.89
UPK3B-202ENST00000334348 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
UPK3B-202ENST00000334348 CARD14Q9BXL6 1004 aa20.59■□□□□ 0.89
UPK3B-202ENST00000334348 HSP90AA2PQ14568 343 aaPredicted RBP20.58■□□□□ 0.89
UPK3B-202ENST00000334348 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
UPK3B-202ENST00000334348 SPHKAPQ2M3C7 1700 aa20.58■□□□□ 0.89
UPK3B-202ENST00000334348 KIDINS220Q9ULH0 1771 aa20.58■□□□□ 0.89
UPK3B-202ENST00000334348 DDX11L8A8MPP1 907 aa20.58■□□□□ 0.88
UPK3B-202ENST00000334348 WDR63Q8IWG1 891 aa20.58■□□□□ 0.88
UPK3B-202ENST00000334348 ZFYVE16Q7Z3T8 1539 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 PKNOX2Q96KN3 472 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 GRPEL1Q9HAV7 217 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
UPK3B-202ENST00000334348 ATP7AQ04656 1500 aa20.56■□□□□ 0.88
UPK3B-202ENST00000334348 TRPM2O94759 1503 aa20.55■□□□□ 0.88
UPK3B-202ENST00000334348 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
UPK3B-202ENST00000334348 HECW2Q9P2P5 1572 aa20.54■□□□□ 0.88
UPK3B-202ENST00000334348 CEP152O94986 1710 aa20.54■□□□□ 0.88
UPK3B-202ENST00000334348 ESPNB1AK53 854 aa20.54■□□□□ 0.88
UPK3B-202ENST00000334348 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
UPK3B-202ENST00000334348 MLH3Q9UHC1 1453 aa20.54■□□□□ 0.88
UPK3B-202ENST00000334348 KANK1Q14678 1352 aa20.53■□□□□ 0.88
UPK3B-202ENST00000334348 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
UPK3B-202ENST00000334348 INO80Q9ULG1 1556 aaPredicted RBP20.53■□□□□ 0.88
UPK3B-202ENST00000334348 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
UPK3B-202ENST00000334348 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
UPK3B-202ENST00000334348 ABCA6Q8N139 1617 aa20.53■□□□□ 0.88
UPK3B-202ENST00000334348 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
UPK3B-202ENST00000334348 TCP11L2Q8N4U5 519 aa20.52■□□□□ 0.88
UPK3B-202ENST00000334348 PTPRTO14522 1441 aa20.52■□□□□ 0.88
UPK3B-202ENST00000334348 NEUROD2Q15784 382 aa20.52■□□□□ 0.88
UPK3B-202ENST00000334348 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
UPK3B-202ENST00000334348 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
UPK3B-202ENST00000334348 DDIT3P35638 169 aa20.51■□□□□ 0.87
UPK3B-202ENST00000334348 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
UPK3B-202ENST00000334348 KIAA1210Q9ULL0 1709 aa20.51■□□□□ 0.87
UPK3B-202ENST00000334348 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
UPK3B-202ENST00000334348 SIGLEC1Q9BZZ2 1709 aa20.49■□□□□ 0.87
UPK3B-202ENST00000334348 VSIG10Q8N0Z9 540 aa20.49■□□□□ 0.87
UPK3B-202ENST00000334348 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
UPK3B-202ENST00000334348 DIP2CQ9Y2E4 1556 aa20.49■□□□□ 0.87
UPK3B-202ENST00000334348 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
UPK3B-202ENST00000334348 ERBB4Q15303 1308 aa20.48■□□□□ 0.87
UPK3B-202ENST00000334348 HDAC1Q13547 482 aaPredicted RBP20.48■□□□□ 0.87
UPK3B-202ENST00000334348 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
UPK3B-202ENST00000334348 ZMYND15Q9H091 742 aa20.47■□□□□ 0.87
UPK3B-202ENST00000334348 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
UPK3B-202ENST00000334348 SNX21Q969T3 373 aa20.46■□□□□ 0.87
UPK3B-202ENST00000334348 CLTCL1P53675 1640 aa20.46■□□□□ 0.87
UPK3B-202ENST00000334348 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
UPK3B-202ENST00000334348 MLECQ14165 292 aa20.45■□□□□ 0.86
UPK3B-202ENST00000334348 CIZ1Q9ULV3 898 aaPredicted RBP20.45■□□□□ 0.86
UPK3B-202ENST00000334348 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
UPK3B-202ENST00000334348 RBM25P49756 843 aaKnown RBP20.44■□□□□ 0.86
UPK3B-202ENST00000334348 FTSJ3Q8IY81 847 aaKnown RBP20.44■□□□□ 0.86
UPK3B-202ENST00000334348 KIF3BO15066 747 aa20.44■□□□□ 0.86
UPK3B-202ENST00000334348 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
UPK3B-202ENST00000334348 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
UPK3B-202ENST00000334348 SKOR2Q2VWA4 1001 aaPredicted RBP20.43■□□□□ 0.86
UPK3B-202ENST00000334348 CFAP70Q5T0N1 1121 aa20.43■□□□□ 0.86
UPK3B-202ENST00000334348 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
UPK3B-202ENST00000334348 PTMSP20962 102 aa20.43■□□□□ 0.86
UPK3B-202ENST00000334348 TNPO1Q92973 898 aaKnown RBP20.43■□□□□ 0.86
UPK3B-202ENST00000334348 ARHGEF40Q8TER5 1519 aa20.42■□□□□ 0.86
UPK3B-202ENST00000334348 TPM2P07951 284 aa20.42■□□□□ 0.86
UPK3B-202ENST00000334348 NEURL4Q96JN8 1562 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms