RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
SRPRA-201ENST00000332118 NLRP1Q9C000 1473 aa18.31■□□□□ 0.52
SRPRA-201ENST00000332118 C3P01024 1663 aa18.31■□□□□ 0.52
SRPRA-201ENST00000332118 TMEM132EQ6IEE7 984 aa18.3■□□□□ 0.52
SRPRA-201ENST00000332118 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
SRPRA-201ENST00000332118 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
SRPRA-201ENST00000332118 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
SRPRA-201ENST00000332118 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
SRPRA-201ENST00000332118 SLIT1O75093 1534 aa18.28■□□□□ 0.52
SRPRA-201ENST00000332118 IQSEC2Q5JU85 1478 aa18.28■□□□□ 0.52
SRPRA-201ENST00000332118 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
SRPRA-201ENST00000332118 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
SRPRA-201ENST00000332118 ATP7BP35670 1465 aa18.26■□□□□ 0.51
SRPRA-201ENST00000332118 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
SRPRA-201ENST00000332118 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SRPRA-201ENST00000332118 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
SRPRA-201ENST00000332118 TNRQ92752 1358 aa18.25■□□□□ 0.51
SRPRA-201ENST00000332118 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
SRPRA-201ENST00000332118 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
SRPRA-201ENST00000332118 TOPAZ1Q8N9V7 1692 aa18.24■□□□□ 0.51
SRPRA-201ENST00000332118 AKAP12Q02952 1782 aa18.24■□□□□ 0.51
SRPRA-201ENST00000332118 CDC42BPGQ6DT37 1551 aa18.24■□□□□ 0.51
SRPRA-201ENST00000332118 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
SRPRA-201ENST00000332118 DIP2AQ14689 1571 aa18.23■□□□□ 0.51
SRPRA-201ENST00000332118 COL3A1P02461 1466 aaPredicted RBP18.23■□□□□ 0.51
SRPRA-201ENST00000332118 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
SRPRA-201ENST00000332118 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
SRPRA-201ENST00000332118 A0A1W2PP64 1363 aa18.21■□□□□ 0.51
SRPRA-201ENST00000332118 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
SRPRA-201ENST00000332118 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
SRPRA-201ENST00000332118 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
SRPRA-201ENST00000332118 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.5
SRPRA-201ENST00000332118 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
SRPRA-201ENST00000332118 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
SRPRA-201ENST00000332118 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
SRPRA-201ENST00000332118 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
SRPRA-201ENST00000332118 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
SRPRA-201ENST00000332118 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
SRPRA-201ENST00000332118 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
SRPRA-201ENST00000332118 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■□□ 17.5
SRPRA-201ENST00000332118 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
SRPRA-201ENST00000332118 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
SRPRA-201ENST00000332118 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
SRPRA-201ENST00000332118 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.5
SRPRA-201ENST00000332118 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.5
SRPRA-201ENST00000332118 METP08581 1390 aa18.14■□□□□ 0.49
SRPRA-201ENST00000332118 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
SRPRA-201ENST00000332118 XRN1Q8IZH2 1706 aaKnown RBP18.13■□□□□ 0.49
SRPRA-201ENST00000332118 PNPLA6Q8IY17 1366 aa18.13■□□□□ 0.49
SRPRA-201ENST00000332118 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
SRPRA-201ENST00000332118 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
SRPRA-201ENST00000332118 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
SRPRA-201ENST00000332118 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
SRPRA-201ENST00000332118 MORC1Q86VD1 984 aa18.1■□□□□ 0.49
SRPRA-201ENST00000332118 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
SRPRA-201ENST00000332118 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 CDCA7LQ96GN5 454 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
SRPRA-201ENST00000332118 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.49
SRPRA-201ENST00000332118 USP54Q70EL1 1684 aa18.08■□□□□ 0.49
SRPRA-201ENST00000332118 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.48
SRPRA-201ENST00000332118 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.48
SRPRA-201ENST00000332118 ADAMTSL3P82987 1691 aa18.08■□□□□ 0.48
SRPRA-201ENST00000332118 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
SRPRA-201ENST00000332118 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
SRPRA-201ENST00000332118 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
SRPRA-201ENST00000332118 POGKQ9P215 609 aa18.05■□□□□ 0.48
SRPRA-201ENST00000332118 STK26Q9P289 416 aa18.05■□□□□ 0.48
SRPRA-201ENST00000332118 MLECQ14165 292 aa18.04■□□□□ 0.48
SRPRA-201ENST00000332118 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
SRPRA-201ENST00000332118 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
SRPRA-201ENST00000332118 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
SRPRA-201ENST00000332118 LRRC7Q96NW7 1537 aa18.04■□□□□ 0.48
SRPRA-201ENST00000332118 FYB1O15117 783 aa18.04■□□□□ 0.48
SRPRA-201ENST00000332118 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
SRPRA-201ENST00000332118 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
SRPRA-201ENST00000332118 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
SRPRA-201ENST00000332118 MYT1Q01538 1121 aa18.02■□□□□ 0.48
SRPRA-201ENST00000332118 PTPRUQ92729 1446 aa18.02■□□□□ 0.48
SRPRA-201ENST00000332118 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
SRPRA-201ENST00000332118 E9PSI1 815 aa18.02■□□□□ 0.47
SRPRA-201ENST00000332118 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.47
SRPRA-201ENST00000332118 MTHFSP49914 203 aa18.01■□□□□ 0.47
SRPRA-201ENST00000332118 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
SRPRA-201ENST00000332118 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
SRPRA-201ENST00000332118 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
SRPRA-201ENST00000332118 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
SRPRA-201ENST00000332118 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
SRPRA-201ENST00000332118 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
SRPRA-201ENST00000332118 APAF1O14727 1248 aa17.99■□□□□ 0.47
SRPRA-201ENST00000332118 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
SRPRA-201ENST00000332118 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
SRPRA-201ENST00000332118 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
SRPRA-201ENST00000332118 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
SRPRA-201ENST00000332118 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
SRPRA-201ENST00000332118 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
SRPRA-201ENST00000332118 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms