RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 SLFN5Q08AF3 891 aa22.94■■□□□ 1.26
NPLOC4-201ENST00000331134 RASSF8Q8NHQ8 419 aa22.94■■□□□ 1.26
NPLOC4-201ENST00000331134 HDAC5Q9UQL6 1122 aa22.93■■□□□ 1.26
NPLOC4-201ENST00000331134 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
NPLOC4-201ENST00000331134 CUX1P39880 1505 aa22.93■■□□□ 1.26
NPLOC4-201ENST00000331134 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
NPLOC4-201ENST00000331134 PTPRGP23470 1445 aa22.92■■□□□ 1.26
NPLOC4-201ENST00000331134 K7ELQ4 463 aaPredicted RBP22.92■■□□□ 1.26
NPLOC4-201ENST00000331134 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
NPLOC4-201ENST00000331134 TBC1D2Q9BYX2 928 aa22.92■■□□□ 1.26
NPLOC4-201ENST00000331134 PDE4CQ08493 712 aa22.91■■□□□ 1.26
NPLOC4-201ENST00000331134 RUFY2Q8WXA3 655 aa22.91■■□□□ 1.26
NPLOC4-201ENST00000331134 SASS6Q6UVJ0 657 aa22.91■■□□□ 1.26
NPLOC4-201ENST00000331134 ATF7IPQ6VMQ6 1270 aa22.91■■□□□ 1.26
NPLOC4-201ENST00000331134 AFAP1Q8N556 730 aa22.91■■□□□ 1.26
NPLOC4-201ENST00000331134 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
NPLOC4-201ENST00000331134 TSPYL4Q9UJ04 414 aa22.9■■□□□ 1.26
NPLOC4-201ENST00000331134 TEFQ10587 303 aa22.9■■□□□ 1.26
NPLOC4-201ENST00000331134 RABEP1Q15276 862 aa22.9■■□□□ 1.26
NPLOC4-201ENST00000331134 MAP7D2Q96T17 732 aa22.89■■□□□ 1.26
NPLOC4-201ENST00000331134 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.26
NPLOC4-201ENST00000331134 MBD3O95983 291 aa22.89■■□□□ 1.25
NPLOC4-201ENST00000331134 TPM3P06753 285 aa22.89■■□□□ 1.25
NPLOC4-201ENST00000331134 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
NPLOC4-201ENST00000331134 TRIM5Q9C035 493 aa22.89■■□□□ 1.25
NPLOC4-201ENST00000331134 NOC3LQ8WTT2 800 aaKnown RBP22.88■■□□□ 1.25
NPLOC4-201ENST00000331134 ZNF428Q96B54 188 aa22.88■■□□□ 1.25
NPLOC4-201ENST00000331134 TSPY26PQ9H489 355 aa22.88■■□□□ 1.25
NPLOC4-201ENST00000331134 KIAA1107Q9UPP5 1409 aa22.88■■□□□ 1.25
NPLOC4-201ENST00000331134 UQCRHLA0A096LP55 91 aa22.87■■□□□ 1.25
NPLOC4-201ENST00000331134 UQCRHP07919 91 aa22.87■■□□□ 1.25
NPLOC4-201ENST00000331134 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
NPLOC4-201ENST00000331134 RRP9O43818 475 aaKnown RBP22.86■■□□□ 1.25
NPLOC4-201ENST00000331134 TWISTNBQ3B726 338 aaPredicted RBP22.86■■□□□ 1.25
NPLOC4-201ENST00000331134 CCDC34Q96HJ3 373 aa22.86■■□□□ 1.25
NPLOC4-201ENST00000331134 CHD1LQ86WJ1 897 aa22.86■■□□□ 1.25
NPLOC4-201ENST00000331134 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
NPLOC4-201ENST00000331134 CLSTN1O94985 981 aa22.85■■□□□ 1.25
NPLOC4-201ENST00000331134 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
NPLOC4-201ENST00000331134 SURF6O75683 361 aaKnown RBP22.84■■□□□ 1.25
NPLOC4-201ENST00000331134 TMEM57Q8N5G2 664 aa22.83■■□□□ 1.25
NPLOC4-201ENST00000331134 IGHDP01880 384 aa22.82■■□□□ 1.24
NPLOC4-201ENST00000331134 CEBPZQ03701 1054 aaKnown RBP22.82■■□□□ 1.24
NPLOC4-201ENST00000331134 TPD52L1Q16890 204 aaPredicted RBP22.82■■□□□ 1.24
NPLOC4-201ENST00000331134 SYCE3A1L190 88 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 ZSCAN30Q86W11 494 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 PANK2Q9BZ23 570 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 CPLX1O14810 134 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 GCC1Q96CN9 775 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 PRDM10Q9NQV6 1147 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 MTERF4Q7Z6M4 381 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 SDF4Q9BRK5 362 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 CCDC73Q6ZRK6 1079 aa22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-201ENST00000331134 XPCQ01831 940 aaPredicted RBP22.8■■□□□ 1.24
NPLOC4-201ENST00000331134 DUSP27Q5VZP5 1158 aa22.8■■□□□ 1.24
NPLOC4-201ENST00000331134 ROCK1Q13464 1354 aa22.8■■□□□ 1.24
NPLOC4-201ENST00000331134 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.247e-8■■■■□ 22.2
NPLOC4-201ENST00000331134 UBTFL1P0CB47 393 aaPredicted RBP22.79■■□□□ 1.24
NPLOC4-201ENST00000331134 KDM4AO75164 1064 aa22.79■■□□□ 1.24
NPLOC4-201ENST00000331134 RNF20Q5VTR2 975 aa22.79■■□□□ 1.24
NPLOC4-201ENST00000331134 G3BP1Q13283 466 aaKnown RBP eCLIP22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 MNS1Q8NEH6 495 aa22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 MAP4K4O95819 1239 aaPredicted RBP22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 SSFA2P28290 1259 aa22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 RARSP54136 660 aaKnown RBP22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 NUTM2GQ5VZR2 741 aa22.78■■□□□ 1.24
NPLOC4-201ENST00000331134 AIMP1Q12904 312 aaKnown RBP22.77■■□□□ 1.24
NPLOC4-201ENST00000331134 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
NPLOC4-201ENST00000331134 WDR63Q8IWG1 891 aa22.77■■□□□ 1.23
NPLOC4-201ENST00000331134 UPF3BQ9BZI7 483 aaKnown RBP22.76■■□□□ 1.23
NPLOC4-201ENST00000331134 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
NPLOC4-201ENST00000331134 TNPO1Q92973 898 aaKnown RBP22.76■■□□□ 1.23
NPLOC4-201ENST00000331134 ERBINQ96RT1 1412 aa22.76■■□□□ 1.23
NPLOC4-201ENST00000331134 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 MAPK8IP2Q13387 824 aaPredicted RBP22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 SSH1Q8WYL5 1049 aa22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 CIZ1Q9ULV3 898 aaPredicted RBP22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 APPP05067 770 aa22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
NPLOC4-201ENST00000331134 NEXNQ0ZGT2 675 aa22.74■■□□□ 1.23
NPLOC4-201ENST00000331134 ERC2O15083 957 aa22.74■■□□□ 1.23
NPLOC4-201ENST00000331134 TEX35Q5T0J7 233 aa22.73■■□□□ 1.23
NPLOC4-201ENST00000331134 C1orf141Q5JVX7 400 aa22.72■■□□□ 1.23
NPLOC4-201ENST00000331134 XRCC6P12956 609 aaKnown RBP eCLIP22.71■■□□□ 1.232e-8■□□□□ 10.2
NPLOC4-201ENST00000331134 GPS2Q13227 327 aa22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 CPLX2Q6PUV4 134 aaKnown RBP22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 CWC22Q9HCG8 908 aaKnown RBP22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 STK3Q13188 491 aa22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 CLASRPQ8N2M8 674 aaKnown RBP22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 IL1RAPL2Q9NP60 686 aa22.71■■□□□ 1.23
NPLOC4-201ENST00000331134 NEUROD6Q96NK8 337 aa22.7■■□□□ 1.22
NPLOC4-201ENST00000331134 TSR1Q2NL82 804 aaKnown RBP22.7■■□□□ 1.22
NPLOC4-201ENST00000331134 MCM2P49736 904 aa22.69■■□□□ 1.22
NPLOC4-201ENST00000331134 PDILTQ8N807 584 aa22.69■■□□□ 1.22
NPLOC4-201ENST00000331134 STAC3Q96MF2 364 aa22.69■■□□□ 1.22
NPLOC4-201ENST00000331134 FSD1Q9BTV5 496 aa22.69■■□□□ 1.22
NPLOC4-201ENST00000331134 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms