RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 NSD2O96028 1365 aa16.04■□□□□ 0.16
NCL-201ENST00000322723 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
NCL-201ENST00000322723 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
NCL-201ENST00000322723 GGT6Q6P531 493 aa16.04■□□□□ 0.16
NCL-201ENST00000322723 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
NCL-201ENST00000322723 ANKRD36BQ8N2N9 1353 aa16.03■□□□□ 0.16
NCL-201ENST00000322723 IDI1Q13907 227 aa16.02■□□□□ 0.16
NCL-201ENST00000322723 AKAP12Q02952 1782 aa16.02■□□□□ 0.15
NCL-201ENST00000322723 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.15
NCL-201ENST00000322723 CPS1P31327 1500 aa16.01■□□□□ 0.15
NCL-201ENST00000322723 MON2Q7Z3U7 1717 aa16.01■□□□□ 0.15
NCL-201ENST00000322723 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
NCL-201ENST00000322723 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
NCL-201ENST00000322723 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
NCL-201ENST00000322723 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
NCL-201ENST00000322723 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
NCL-201ENST00000322723 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
NCL-201ENST00000322723 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
NCL-201ENST00000322723 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
NCL-201ENST00000322723 ABCC11Q96J66 1382 aa15.98■□□□□ 0.15
NCL-201ENST00000322723 TECPR2O15040 1411 aa15.97■□□□□ 0.15
NCL-201ENST00000322723 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
NCL-201ENST00000322723 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
NCL-201ENST00000322723 DEKP35659 375 aaKnown RBP15.96■□□□□ 0.15
NCL-201ENST00000322723 RCAN3Q9UKA8 241 aa15.96■□□□□ 0.15
NCL-201ENST00000322723 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.15
NCL-201ENST00000322723 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.14
NCL-201ENST00000322723 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
NCL-201ENST00000322723 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
NCL-201ENST00000322723 DUSP27Q5VZP5 1158 aa15.95■□□□□ 0.14
NCL-201ENST00000322723 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
NCL-201ENST00000322723 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
NCL-201ENST00000322723 C3P01024 1663 aa15.94■□□□□ 0.14
NCL-201ENST00000322723 ATP7BP35670 1465 aa15.93■□□□□ 0.14
NCL-201ENST00000322723 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
NCL-201ENST00000322723 EVC2Q86UK5 1308 aa15.92■□□□□ 0.14
NCL-201ENST00000322723 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
NCL-201ENST00000322723 B4GALNT3Q6L9W6 998 aa15.92■□□□□ 0.14
NCL-201ENST00000322723 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
NCL-201ENST00000322723 TMEM132EQ6IEE7 984 aa15.91■□□□□ 0.14
NCL-201ENST00000322723 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
NCL-201ENST00000322723 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
NCL-201ENST00000322723 SLFN5Q08AF3 891 aa15.91■□□□□ 0.14
NCL-201ENST00000322723 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
NCL-201ENST00000322723 NALCNQ8IZF0 1738 aa15.9■□□□□ 0.14
NCL-201ENST00000322723 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
NCL-201ENST00000322723 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
NCL-201ENST00000322723 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
NCL-201ENST00000322723 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
NCL-201ENST00000322723 SLC12A5Q9H2X9 1139 aa15.87■□□□□ 0.13
NCL-201ENST00000322723 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
NCL-201ENST00000322723 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
NCL-201ENST00000322723 USP54Q70EL1 1684 aa15.87■□□□□ 0.13
NCL-201ENST00000322723 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
NCL-201ENST00000322723 CPSF1Q10570 1443 aaKnown RBP15.86■□□□□ 0.13
NCL-201ENST00000322723 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■■■□□ 15.1
NCL-201ENST00000322723 SLIT1O75093 1534 aa15.85■□□□□ 0.13
NCL-201ENST00000322723 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
NCL-201ENST00000322723 SIRT1Q96EB6 747 aa15.85■□□□□ 0.13
NCL-201ENST00000322723 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
NCL-201ENST00000322723 CCDC27Q2M243 656 aa15.84■□□□□ 0.13
NCL-201ENST00000322723 NPM2Q86SE8 214 aaKnown RBP15.84■□□□□ 0.13
NCL-201ENST00000322723 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
NCL-201ENST00000322723 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.13
NCL-201ENST00000322723 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.13
NCL-201ENST00000322723 EXOC6Q8TAG9 804 aa15.83■□□□□ 0.13
NCL-201ENST00000322723 GOLGA2Q08379 1002 aa15.83■□□□□ 0.12
NCL-201ENST00000322723 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
NCL-201ENST00000322723 DIP2AQ14689 1571 aa15.82■□□□□ 0.12
NCL-201ENST00000322723 ZMYM3Q14202 1370 aa15.82■□□□□ 0.12
NCL-201ENST00000322723 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
NCL-201ENST00000322723 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
NCL-201ENST00000322723 ADAMTS13Q76LX8 1427 aa15.8■□□□□ 0.12
NCL-201ENST00000322723 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
NCL-201ENST00000322723 MSH5O43196 834 aa15.8■□□□□ 0.12
NCL-201ENST00000322723 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
NCL-201ENST00000322723 E9PSI1 815 aa15.78■□□□□ 0.12
NCL-201ENST00000322723 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
NCL-201ENST00000322723 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
NCL-201ENST00000322723 MORC1Q86VD1 984 aa15.77■□□□□ 0.11
NCL-201ENST00000322723 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.11
NCL-201ENST00000322723 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
NCL-201ENST00000322723 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 APAF1O14727 1248 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 METP08581 1390 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 NUTM2DQ5VT03 806 aaPredicted RBP15.76■□□□□ 0.11
NCL-201ENST00000322723 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
NCL-201ENST00000322723 TNRQ92752 1358 aa15.76■□□□□ 0.11
NCL-201ENST00000322723 ANP32AP39687 249 aaKnown RBP15.75■□□□□ 0.11
NCL-201ENST00000322723 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
NCL-201ENST00000322723 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
NCL-201ENST00000322723 EDC4Q6P2E9 1401 aaKnown RBP15.75■□□□□ 0.11
NCL-201ENST00000322723 WDR63Q8IWG1 891 aa15.75■□□□□ 0.11
NCL-201ENST00000322723 PLEKHG1Q9ULL1 1385 aa15.74■□□□□ 0.11
NCL-201ENST00000322723 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms