RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
PTPN6-201ENST00000318974 WAPLQ7Z5K2 1190 aa17.21■□□□□ 0.35
PTPN6-201ENST00000318974 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
PTPN6-201ENST00000318974 KNDC1Q76NI1 1749 aa17.21■□□□□ 0.35
PTPN6-201ENST00000318974 PLEKHH1Q9ULM0 1364 aa17.2■□□□□ 0.34
PTPN6-201ENST00000318974 CPS1P31327 1500 aa17.2■□□□□ 0.34
PTPN6-201ENST00000318974 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
PTPN6-201ENST00000318974 MYOM1P52179 1685 aa17.19■□□□□ 0.34
PTPN6-201ENST00000318974 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
PTPN6-201ENST00000318974 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
PTPN6-201ENST00000318974 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
PTPN6-201ENST00000318974 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
PTPN6-201ENST00000318974 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
PTPN6-201ENST00000318974 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
PTPN6-201ENST00000318974 ROBO2Q9HCK4 1378 aa17.16■□□□□ 0.34
PTPN6-201ENST00000318974 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
PTPN6-201ENST00000318974 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
PTPN6-201ENST00000318974 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
PTPN6-201ENST00000318974 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
PTPN6-201ENST00000318974 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPN6-201ENST00000318974 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
PTPN6-201ENST00000318974 NEFLP07196 543 aa17.15■□□□□ 0.34
PTPN6-201ENST00000318974 RALBP1Q15311 655 aa17.15■□□□□ 0.34
PTPN6-201ENST00000318974 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-201ENST00000318974 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
PTPN6-201ENST00000318974 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
PTPN6-201ENST00000318974 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
PTPN6-201ENST00000318974 FKBP8Q14318 412 aa17.12■□□□□ 0.33
PTPN6-201ENST00000318974 WASLO00401 505 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-201ENST00000318974 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
PTPN6-201ENST00000318974 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
PTPN6-201ENST00000318974 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
PTPN6-201ENST00000318974 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
PTPN6-201ENST00000318974 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
PTPN6-201ENST00000318974 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
PTPN6-201ENST00000318974 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
PTPN6-201ENST00000318974 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
PTPN6-201ENST00000318974 XRN1Q8IZH2 1706 aaKnown RBP17.09■□□□□ 0.33
PTPN6-201ENST00000318974 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
PTPN6-201ENST00000318974 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
PTPN6-201ENST00000318974 KCNA6P17658 529 aa17.08■□□□□ 0.32
PTPN6-201ENST00000318974 ADGRB2O60241 1585 aa17.07■□□□□ 0.32
PTPN6-201ENST00000318974 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
PTPN6-201ENST00000318974 TERF2IPQ9NYB0 399 aa17.05■□□□□ 0.32
PTPN6-201ENST00000318974 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-201ENST00000318974 HSPA2P54652 639 aa17.04■□□□□ 0.32
PTPN6-201ENST00000318974 CABP1Q9NZU7 370 aa17.04■□□□□ 0.32
PTPN6-201ENST00000318974 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
PTPN6-201ENST00000318974 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
PTPN6-201ENST00000318974 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
PTPN6-201ENST00000318974 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
PTPN6-201ENST00000318974 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
PTPN6-201ENST00000318974 ZBED9Q6R2W3 1325 aa17.03■□□□□ 0.32
PTPN6-201ENST00000318974 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
PTPN6-201ENST00000318974 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
PTPN6-201ENST00000318974 LMTK3Q96Q04 1460 aa17.02■□□□□ 0.32
PTPN6-201ENST00000318974 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
PTPN6-201ENST00000318974 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
PTPN6-201ENST00000318974 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
PTPN6-201ENST00000318974 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
PTPN6-201ENST00000318974 ATP7BP35670 1465 aa17■□□□□ 0.31
PTPN6-201ENST00000318974 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
PTPN6-201ENST00000318974 USP32Q8NFA0 1604 aa17■□□□□ 0.31
PTPN6-201ENST00000318974 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
PTPN6-201ENST00000318974 NSD2O96028 1365 aa16.98■□□□□ 0.31
PTPN6-201ENST00000318974 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
PTPN6-201ENST00000318974 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
PTPN6-201ENST00000318974 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
PTPN6-201ENST00000318974 MORC1Q86VD1 984 aa16.96■□□□□ 0.3
PTPN6-201ENST00000318974 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
PTPN6-201ENST00000318974 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
PTPN6-201ENST00000318974 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
PTPN6-201ENST00000318974 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
PTPN6-201ENST00000318974 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
PTPN6-201ENST00000318974 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
PTPN6-201ENST00000318974 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
PTPN6-201ENST00000318974 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
PTPN6-201ENST00000318974 ADGRL3Q9HAR2 1447 aa16.93■□□□□ 0.3
PTPN6-201ENST00000318974 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
PTPN6-201ENST00000318974 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
PTPN6-201ENST00000318974 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
PTPN6-201ENST00000318974 FYB1O15117 783 aa16.92■□□□□ 0.3
PTPN6-201ENST00000318974 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
PTPN6-201ENST00000318974 ACEP12821 1306 aa16.91■□□□□ 0.3
PTPN6-201ENST00000318974 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
PTPN6-201ENST00000318974 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
PTPN6-201ENST00000318974 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
PTPN6-201ENST00000318974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPN6-201ENST00000318974 FMN2Q9NZ56 1722 aa16.89■□□□□ 0.29
PTPN6-201ENST00000318974 STRCQ7RTU9 1775 aa16.88■□□□□ 0.29
PTPN6-201ENST00000318974 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
PTPN6-201ENST00000318974 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
PTPN6-201ENST00000318974 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
PTPN6-201ENST00000318974 AKAP12Q02952 1782 aa16.86■□□□□ 0.29
PTPN6-201ENST00000318974 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
PTPN6-201ENST00000318974 MON2Q7Z3U7 1717 aa16.86■□□□□ 0.29
PTPN6-201ENST00000318974 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
PTPN6-201ENST00000318974 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
PTPN6-201ENST00000318974 USP6P35125 1406 aa16.85■□□□□ 0.29
PTPN6-201ENST00000318974 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms