RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 MSH5O43196 834 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 CDC45O75419 566 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 HFM1A2PYH4 1435 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 MCTP1Q6DN14 999 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 SYNE3Q6ZMZ3 975 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 CREBRFQ8IUR6 639 aa18.62■□□□□ 0.57
KDM3A-201ENST00000312912 AKAP17AQ02040 695 aaKnown RBP18.61■□□□□ 0.57
KDM3A-201ENST00000312912 PNISRQ8TF01 805 aaKnown RBP18.61■□□□□ 0.57
KDM3A-201ENST00000312912 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
KDM3A-201ENST00000312912 TTC5Q8N0Z6 440 aa18.61■□□□□ 0.57
KDM3A-201ENST00000312912 SMC3Q9UQE7 1217 aa18.61■□□□□ 0.57
KDM3A-201ENST00000312912 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
KDM3A-201ENST00000312912 TSR1Q2NL82 804 aaKnown RBP18.6■□□□□ 0.57
KDM3A-201ENST00000312912 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
KDM3A-201ENST00000312912 ERC2O15083 957 aa18.59■□□□□ 0.57
KDM3A-201ENST00000312912 TPD52L1Q16890 204 aaPredicted RBP18.59■□□□□ 0.57
KDM3A-201ENST00000312912 TPM1P09493 284 aa18.59■□□□□ 0.57
KDM3A-201ENST00000312912 HMOX1P09601 288 aa18.58■□□□□ 0.57
KDM3A-201ENST00000312912 NBPF8Q3BBV2 869 aa18.58■□□□□ 0.56
KDM3A-201ENST00000312912 CPLX1O14810 134 aa18.58■□□□□ 0.56
KDM3A-201ENST00000312912 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
KDM3A-201ENST00000312912 BICD2Q8TD16 824 aa18.57■□□□□ 0.56
KDM3A-201ENST00000312912 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
KDM3A-201ENST00000312912 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
KDM3A-201ENST00000312912 NECTIN2Q92692 538 aa18.56■□□□□ 0.56
KDM3A-201ENST00000312912 VPS37CA5D8V6 355 aaPredicted RBP18.56■□□□□ 0.56
KDM3A-201ENST00000312912 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
KDM3A-201ENST00000312912 MARCH6O60337 910 aa18.56■□□□□ 0.56
KDM3A-201ENST00000312912 TRIM29Q14134 588 aa18.56■□□□□ 0.56
KDM3A-201ENST00000312912 HMGN5P82970 282 aaKnown RBP18.55■□□□□ 0.56
KDM3A-201ENST00000312912 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
KDM3A-201ENST00000312912 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
KDM3A-201ENST00000312912 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
KDM3A-201ENST00000312912 GNAI3P08754 354 aa18.54■□□□□ 0.56
KDM3A-201ENST00000312912 TRDNQ13061 729 aa18.54■□□□□ 0.56
KDM3A-201ENST00000312912 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
KDM3A-201ENST00000312912 MEX3CQ5U5Q3 659 aaKnown RBP18.53■□□□□ 0.56
KDM3A-201ENST00000312912 POGZQ7Z3K3 1410 aa18.53■□□□□ 0.56
KDM3A-201ENST00000312912 SCAPERQ9BY12 1400 aa18.53■□□□□ 0.56
KDM3A-201ENST00000312912 TRAK2O60296 914 aa18.53■□□□□ 0.56
KDM3A-201ENST00000312912 CT47B1P0C2W7 299 aaPredicted RBP18.52■□□□□ 0.56
KDM3A-201ENST00000312912 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
KDM3A-201ENST00000312912 ATF3P18847 181 aa18.52■□□□□ 0.56
KDM3A-201ENST00000312912 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.56
KDM3A-201ENST00000312912 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
KDM3A-201ENST00000312912 MCM2P49736 904 aa18.52■□□□□ 0.55
KDM3A-201ENST00000312912 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 GCC1Q96CN9 775 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC39Q9UFE4 941 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
KDM3A-201ENST00000312912 ESPNB1AK53 854 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 MBD3O95983 291 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 HOOK1Q9UJC3 728 aaKnown RBP18.51■□□□□ 0.55
KDM3A-201ENST00000312912 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 CEP89Q96ST8 783 aa18.51■□□□□ 0.55
KDM3A-201ENST00000312912 G3V3G9 751 aa18.5■□□□□ 0.55
KDM3A-201ENST00000312912 PSME1Q06323 249 aa18.5■□□□□ 0.55
KDM3A-201ENST00000312912 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC73Q6ZRK6 1079 aa18.5■□□□□ 0.55
KDM3A-201ENST00000312912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
KDM3A-201ENST00000312912 CCAR2Q8N163 923 aaKnown RBP18.5■□□□□ 0.55
KDM3A-201ENST00000312912 RABEP1Q15276 862 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 ANKRD20A12PQ8NF67 263 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 IPO7O95373 1038 aaKnown RBP18.49■□□□□ 0.55
KDM3A-201ENST00000312912 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
KDM3A-201ENST00000312912 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC173Q0VFZ6 552 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 WDR63Q8IWG1 891 aa18.49■□□□□ 0.55
KDM3A-201ENST00000312912 EVA1CP58658 441 aa18.48■□□□□ 0.55
KDM3A-201ENST00000312912 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
KDM3A-201ENST00000312912 PRKAR2BP31323 418 aa18.48■□□□□ 0.55
KDM3A-201ENST00000312912 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC70Q6NSX1 233 aa18.47■□□□□ 0.55
KDM3A-201ENST00000312912 BBXQ8WY36 941 aaPredicted RBP18.47■□□□□ 0.55
KDM3A-201ENST00000312912 HOMER1Q86YM7 354 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 RAPGEF4Q8WZA2 1011 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC47Q96A33 483 aaKnown RBP18.46■□□□□ 0.55
KDM3A-201ENST00000312912 BCAR3O75815 825 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 PSMA5P28066 241 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
KDM3A-201ENST00000312912 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
KDM3A-201ENST00000312912 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
KDM3A-201ENST00000312912 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
KDM3A-201ENST00000312912 NEK4P51957 841 aa18.45■□□□□ 0.54
KDM3A-201ENST00000312912 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
KDM3A-201ENST00000312912 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
KDM3A-201ENST00000312912 ARGLU1Q9NWB6 273 aaPredicted RBP18.45■□□□□ 0.54
KDM3A-201ENST00000312912 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
KDM3A-201ENST00000312912 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
KDM3A-201ENST00000312912 UQCRHP07919 91 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms