RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
COL6A2-202ENST00000310645 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
COL6A2-202ENST00000310645 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
COL6A2-202ENST00000310645 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
COL6A2-202ENST00000310645 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
COL6A2-202ENST00000310645 UNC13BO14795 1591 aa18.48■□□□□ 0.55
COL6A2-202ENST00000310645 AAMPQ13685 434 aa18.48■□□□□ 0.55
COL6A2-202ENST00000310645 GAS2L3Q86XJ1 694 aa18.48■□□□□ 0.55
COL6A2-202ENST00000310645 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
COL6A2-202ENST00000310645 RRP9O43818 475 aaKnown RBP18.46■□□□□ 0.55
COL6A2-202ENST00000310645 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
COL6A2-202ENST00000310645 RNF17Q9BXT8 1623 aaKnown RBP18.46■□□□□ 0.55
COL6A2-202ENST00000310645 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
COL6A2-202ENST00000310645 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
COL6A2-202ENST00000310645 LNPKQ9C0E8 428 aa18.45■□□□□ 0.54
COL6A2-202ENST00000310645 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
COL6A2-202ENST00000310645 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
COL6A2-202ENST00000310645 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
COL6A2-202ENST00000310645 MADDQ8WXG6 1647 aa18.44■□□□□ 0.54
COL6A2-202ENST00000310645 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
COL6A2-202ENST00000310645 ATP10AO60312 1499 aa18.44■□□□□ 0.54
COL6A2-202ENST00000310645 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
COL6A2-202ENST00000310645 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
COL6A2-202ENST00000310645 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
COL6A2-202ENST00000310645 IQGAP1P46940 1657 aa18.43■□□□□ 0.54
COL6A2-202ENST00000310645 TRIM27P14373 513 aa18.43■□□□□ 0.54
COL6A2-202ENST00000310645 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
COL6A2-202ENST00000310645 GBP4Q96PP9 640 aa18.42■□□□□ 0.54
COL6A2-202ENST00000310645 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
COL6A2-202ENST00000310645 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
COL6A2-202ENST00000310645 MYOM1P52179 1685 aa18.41■□□□□ 0.54
COL6A2-202ENST00000310645 MAST1Q9Y2H9 1570 aa18.41■□□□□ 0.54
COL6A2-202ENST00000310645 ERVK-7P63135 1459 aa18.41■□□□□ 0.54
COL6A2-202ENST00000310645 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
COL6A2-202ENST00000310645 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
COL6A2-202ENST00000310645 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
COL6A2-202ENST00000310645 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
COL6A2-202ENST00000310645 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.54
COL6A2-202ENST00000310645 KDM5AP29375 1690 aaKnown RBP18.39■□□□□ 0.54
COL6A2-202ENST00000310645 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
COL6A2-202ENST00000310645 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
COL6A2-202ENST00000310645 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
COL6A2-202ENST00000310645 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
COL6A2-202ENST00000310645 TMEM57Q8N5G2 664 aa18.38■□□□□ 0.53
COL6A2-202ENST00000310645 ZMYM3Q14202 1370 aa18.38■□□□□ 0.53
COL6A2-202ENST00000310645 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
COL6A2-202ENST00000310645 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
COL6A2-202ENST00000310645 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
COL6A2-202ENST00000310645 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
COL6A2-202ENST00000310645 TTC37Q6PGP7 1564 aa18.37■□□□□ 0.53
COL6A2-202ENST00000310645 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
COL6A2-202ENST00000310645 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
COL6A2-202ENST00000310645 KIF3BO15066 747 aa18.36■□□□□ 0.53
COL6A2-202ENST00000310645 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
COL6A2-202ENST00000310645 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
COL6A2-202ENST00000310645 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
COL6A2-202ENST00000310645 NCLP19338 710 aaKnown RBP18.36■□□□□ 0.53
COL6A2-202ENST00000310645 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
COL6A2-202ENST00000310645 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
COL6A2-202ENST00000310645 SSFA2P28290 1259 aa18.35■□□□□ 0.53
COL6A2-202ENST00000310645 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
COL6A2-202ENST00000310645 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
COL6A2-202ENST00000310645 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
COL6A2-202ENST00000310645 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
COL6A2-202ENST00000310645 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
COL6A2-202ENST00000310645 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
COL6A2-202ENST00000310645 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
COL6A2-202ENST00000310645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.53
COL6A2-202ENST00000310645 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.53
COL6A2-202ENST00000310645 SKOR2Q2VWA4 1001 aaPredicted RBP18.33■□□□□ 0.52
COL6A2-202ENST00000310645 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
COL6A2-202ENST00000310645 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
COL6A2-202ENST00000310645 DDIT3P35638 169 aa18.32■□□□□ 0.52
COL6A2-202ENST00000310645 CEP152O94986 1710 aa18.32■□□□□ 0.52
COL6A2-202ENST00000310645 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
COL6A2-202ENST00000310645 SNX21Q969T3 373 aa18.32■□□□□ 0.52
COL6A2-202ENST00000310645 C1orf115Q9H7X2 142 aa18.32■□□□□ 0.52
COL6A2-202ENST00000310645 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL6A2-202ENST00000310645 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
COL6A2-202ENST00000310645 CHD1LQ86WJ1 897 aa18.31■□□□□ 0.52
COL6A2-202ENST00000310645 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
COL6A2-202ENST00000310645 ZBTB40Q9NUA8 1239 aa18.3■□□□□ 0.52
COL6A2-202ENST00000310645 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
COL6A2-202ENST00000310645 NUCB1Q02818 461 aa18.3■□□□□ 0.52
COL6A2-202ENST00000310645 CLTCL1P53675 1640 aa18.3■□□□□ 0.52
COL6A2-202ENST00000310645 TPM2P07951 284 aa18.29■□□□□ 0.52
COL6A2-202ENST00000310645 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
COL6A2-202ENST00000310645 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
COL6A2-202ENST00000310645 PTPRTO14522 1441 aa18.29■□□□□ 0.52
COL6A2-202ENST00000310645 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
COL6A2-202ENST00000310645 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
COL6A2-202ENST00000310645 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
COL6A2-202ENST00000310645 ARID3AQ99856 593 aa18.28■□□□□ 0.52
COL6A2-202ENST00000310645 IQSEC2Q5JU85 1478 aa18.28■□□□□ 0.52
COL6A2-202ENST00000310645 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
COL6A2-202ENST00000310645 KANK1Q14678 1352 aa18.28■□□□□ 0.52
COL6A2-202ENST00000310645 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
COL6A2-202ENST00000310645 TRPM2O94759 1503 aa18.27■□□□□ 0.52
COL6A2-202ENST00000310645 KIF2CQ99661 725 aa18.27■□□□□ 0.52
COL6A2-202ENST00000310645 RIPK4P57078 832 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms