RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
RUNX3-201ENST00000308873 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
RUNX3-201ENST00000308873 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
RUNX3-201ENST00000308873 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
RUNX3-201ENST00000308873 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
RUNX3-201ENST00000308873 FBLN1P23142 703 aa18.67■□□□□ 0.58
RUNX3-201ENST00000308873 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
RUNX3-201ENST00000308873 XRCC6P12956 609 aaKnown RBP eCLIP18.67■□□□□ 0.58
RUNX3-201ENST00000308873 RIPK4P57078 832 aa18.67■□□□□ 0.58
RUNX3-201ENST00000308873 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
RUNX3-201ENST00000308873 CHMP5Q9NZZ3 219 aa18.67■□□□□ 0.58
RUNX3-201ENST00000308873 SLC24A1O60721 1099 aa18.66■□□□□ 0.58
RUNX3-201ENST00000308873 TRIM27P14373 513 aa18.66■□□□□ 0.58
RUNX3-201ENST00000308873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
RUNX3-201ENST00000308873 INSRP06213 1382 aa18.65■□□□□ 0.58
RUNX3-201ENST00000308873 TMEM57Q8N5G2 664 aa18.65■□□□□ 0.58
RUNX3-201ENST00000308873 MINK1Q8N4C8 1332 aaPredicted RBP18.65■□□□□ 0.58
RUNX3-201ENST00000308873 ARHGEF5Q12774 1597 aa18.65■□□□□ 0.58
RUNX3-201ENST00000308873 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
RUNX3-201ENST00000308873 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
RUNX3-201ENST00000308873 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
RUNX3-201ENST00000308873 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
RUNX3-201ENST00000308873 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
RUNX3-201ENST00000308873 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
RUNX3-201ENST00000308873 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
RUNX3-201ENST00000308873 HMOX1P09601 288 aa18.61■□□□□ 0.57
RUNX3-201ENST00000308873 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
RUNX3-201ENST00000308873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.61■□□□□ 0.57
RUNX3-201ENST00000308873 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
RUNX3-201ENST00000308873 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
RUNX3-201ENST00000308873 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
RUNX3-201ENST00000308873 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
RUNX3-201ENST00000308873 NOS1P29475 1434 aa18.59■□□□□ 0.57
RUNX3-201ENST00000308873 STAC3Q96MF2 364 aa18.59■□□□□ 0.57
RUNX3-201ENST00000308873 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
RUNX3-201ENST00000308873 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.57
RUNX3-201ENST00000308873 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
RUNX3-201ENST00000308873 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
RUNX3-201ENST00000308873 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
RUNX3-201ENST00000308873 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
RUNX3-201ENST00000308873 ATP10AO60312 1499 aa18.57■□□□□ 0.56
RUNX3-201ENST00000308873 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
RUNX3-201ENST00000308873 PLCH2O75038 1416 aa18.56■□□□□ 0.56
RUNX3-201ENST00000308873 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
RUNX3-201ENST00000308873 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
RUNX3-201ENST00000308873 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
RUNX3-201ENST00000308873 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
RUNX3-201ENST00000308873 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
RUNX3-201ENST00000308873 SOX12O15370 315 aa18.54■□□□□ 0.56
RUNX3-201ENST00000308873 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
RUNX3-201ENST00000308873 PREX2Q70Z35 1606 aa18.53■□□□□ 0.56
RUNX3-201ENST00000308873 GRPEL1Q9HAV7 217 aa18.53■□□□□ 0.56
RUNX3-201ENST00000308873 NPC1L1Q9UHC9 1359 aa18.53■□□□□ 0.56
RUNX3-201ENST00000308873 GBP4Q96PP9 640 aa18.53■□□□□ 0.56
RUNX3-201ENST00000308873 DDX11L8A8MPP1 907 aa18.52■□□□□ 0.56
RUNX3-201ENST00000308873 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
RUNX3-201ENST00000308873 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.56
RUNX3-201ENST00000308873 NPM1P06748 294 aaKnown RBP eCLIP18.52■□□□□ 0.56
RUNX3-201ENST00000308873 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
RUNX3-201ENST00000308873 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
RUNX3-201ENST00000308873 ARID3AQ99856 593 aa18.51■□□□□ 0.55
RUNX3-201ENST00000308873 MRE11P49959 708 aa18.51■□□□□ 0.55
RUNX3-201ENST00000308873 CHD1LQ86WJ1 897 aa18.5■□□□□ 0.55
RUNX3-201ENST00000308873 CFAP65Q6ZU64 1925 aaKnown RBP18.5■□□□□ 0.55
RUNX3-201ENST00000308873 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
RUNX3-201ENST00000308873 DDX49Q9Y6V7 483 aaKnown RBP18.49■□□□□ 0.55
RUNX3-201ENST00000308873 SYNMO15061 1565 aa18.49■□□□□ 0.55
RUNX3-201ENST00000308873 ABCC2Q92887 1545 aa18.49■□□□□ 0.55
RUNX3-201ENST00000308873 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
RUNX3-201ENST00000308873 AAMPQ13685 434 aa18.49■□□□□ 0.55
RUNX3-201ENST00000308873 PTPRTO14522 1441 aa18.48■□□□□ 0.55
RUNX3-201ENST00000308873 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
RUNX3-201ENST00000308873 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
RUNX3-201ENST00000308873 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
RUNX3-201ENST00000308873 UNC13BO14795 1591 aa18.47■□□□□ 0.55
RUNX3-201ENST00000308873 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
RUNX3-201ENST00000308873 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
RUNX3-201ENST00000308873 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
RUNX3-201ENST00000308873 TERF2IPQ9NYB0 399 aa18.47■□□□□ 0.55
RUNX3-201ENST00000308873 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
RUNX3-201ENST00000308873 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
RUNX3-201ENST00000308873 HSP90AA2PQ14568 343 aaPredicted RBP18.46■□□□□ 0.55
RUNX3-201ENST00000308873 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
RUNX3-201ENST00000308873 HDGFL2Q7Z4V5 671 aaPredicted RBP18.46■□□□□ 0.55
RUNX3-201ENST00000308873 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
RUNX3-201ENST00000308873 KIF16BQ96L93 1317 aa18.46■□□□□ 0.54
RUNX3-201ENST00000308873 SSFA2P28290 1259 aa18.46■□□□□ 0.54
RUNX3-201ENST00000308873 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
RUNX3-201ENST00000308873 ESPNB1AK53 854 aa18.45■□□□□ 0.54
RUNX3-201ENST00000308873 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
RUNX3-201ENST00000308873 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
RUNX3-201ENST00000308873 MCTP1Q6DN14 999 aa18.44■□□□□ 0.54
RUNX3-201ENST00000308873 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
RUNX3-201ENST00000308873 GLIPR1L2Q4G1C9 344 aa18.44■□□□□ 0.54
RUNX3-201ENST00000308873 TSPYL6Q8N831 410 aa18.44■□□□□ 0.54
RUNX3-201ENST00000308873 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
RUNX3-201ENST00000308873 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
RUNX3-201ENST00000308873 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
RUNX3-201ENST00000308873 UBE2Q2Q8WVN8 375 aa18.43■□□□□ 0.54
RUNX3-201ENST00000308873 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms