RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 IFT172Q9UG01 1749 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 DEPDC5O75140 1603 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 CLTCL1P53675 1640 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 HSCBQ8IWL3 235 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 PPP1R9BQ96SB3 815 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 PLA2R1Q13018 1463 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 TET3O43151 1660 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 MCM5P33992 734 aa6.79□□□□□ -1.32
USP8-201ENST00000307179 MYOM2P54296 1465 aa6.79□□□□□ -1.32
USP8-201ENST00000307179 UHRF1BP1LA0JNW5 1464 aa6.79□□□□□ -1.32
USP8-201ENST00000307179 AMER1Q5JTC6 1135 aaPredicted RBP6.79□□□□□ -1.32
USP8-201ENST00000307179 CLEC17AQ6ZS10 378 aa6.79□□□□□ -1.32
USP8-201ENST00000307179 SBNO2Q9Y2G9 1366 aa6.79□□□□□ -1.32
USP8-201ENST00000307179 DDIT3P35638 169 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 CC2D1BQ5T0F9 858 aaKnown RBP6.78□□□□□ -1.32
USP8-201ENST00000307179 SMC5Q8IY18 1101 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 SETBP1Q9Y6X0 1596 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 OFD1O75665 1012 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 CSPP1Q1MSJ5 1256 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 CCDC27Q2M243 656 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
USP8-201ENST00000307179 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
USP8-201ENST00000307179 WDR63Q8IWG1 891 aa6.77□□□□□ -1.32
USP8-201ENST00000307179 CANXP27824 592 aaKnown RBP6.77□□□□□ -1.33
USP8-201ENST00000307179 ERCC6Q03468 1493 aa6.77□□□□□ -1.33
USP8-201ENST00000307179 SMAP1Q8IYB5 467 aaPredicted RBP6.77□□□□□ -1.33
USP8-201ENST00000307179 ABCA6Q8N139 1617 aa6.77□□□□□ -1.33
USP8-201ENST00000307179 NCLP19338 710 aaKnown RBP6.77□□□□□ -1.33
USP8-201ENST00000307179 IGHDP01880 384 aa6.77□□□□□ -1.33
USP8-201ENST00000307179 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.33
USP8-201ENST00000307179 PPRC1Q5VV67 1664 aaKnown RBP6.76□□□□□ -1.33
USP8-201ENST00000307179 MAP3K4Q9Y6R4 1608 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 KLHL34Q8N239 644 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 C22orf23Q9BZE7 217 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 PLB1Q6P1J6 1458 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 KIF1BO60333 1816 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 HDAC1Q13547 482 aaPredicted RBP6.76□□□□□ -1.33
USP8-201ENST00000307179 ZNF692Q9BU19 519 aaPredicted RBP6.76□□□□□ -1.33
USP8-201ENST00000307179 ANKRD26Q9UPS8 1709 aa6.76□□□□□ -1.33
USP8-201ENST00000307179 RAB3GAP1Q15042 981 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 KDM2AQ9Y2K7 1162 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 SYCP2Q9BX26 1530 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 ZNF500O60304 480 aaPredicted RBP6.75□□□□□ -1.33
USP8-201ENST00000307179 MSNP26038 577 aaKnown RBP6.75□□□□□ -1.33
USP8-201ENST00000307179 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
USP8-201ENST00000307179 SKAP1Q86WV1 359 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 CHMP4BQ9H444 224 aaKnown RBP6.75□□□□□ -1.33
USP8-201ENST00000307179 PTPRTO14522 1441 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 NSD2O96028 1365 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 ARAP3Q8WWN8 1544 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 DYNC1I1O14576 645 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 PHF23Q9BUL5 403 aaPredicted RBP6.75□□□□□ -1.33
USP8-201ENST00000307179 ATP10BO94823 1461 aa6.75□□□□□ -1.33
USP8-201ENST00000307179 PLEKHD1A6NEE1 506 aa6.74□□□□□ -1.33
USP8-201ENST00000307179 UTP14CQ5TAP6 766 aaKnown RBP6.74□□□□□ -1.33
USP8-201ENST00000307179 PDZRN3Q9UPQ7 1066 aa6.74□□□□□ -1.33
USP8-201ENST00000307179 VWDEQ8N2E2 1590 aa6.74□□□□□ -1.33
USP8-201ENST00000307179 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
USP8-201ENST00000307179 PANK2Q9BZ23 570 aa6.74□□□□□ -1.33
USP8-201ENST00000307179 SEC24BO95487 1268 aa6.73□□□□□ -1.33
USP8-201ENST00000307179 ZNF445P59923 1031 aa6.73□□□□□ -1.33
USP8-201ENST00000307179 KLHL40Q2TBA0 621 aa6.73□□□□□ -1.33
USP8-201ENST00000307179 ABCC11Q96J66 1382 aa6.73□□□□□ -1.33
USP8-201ENST00000307179 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
USP8-201ENST00000307179 ERVK-7P63135 1459 aa6.73□□□□□ -1.33
USP8-201ENST00000307179 MVPQ14764 893 aaKnown RBP6.73□□□□□ -1.33
USP8-201ENST00000307179 NRXN1Q9ULB1 1477 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 RUNDC1Q96C34 613 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 ABCA9Q8IUA7 1624 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 BCAR3O75815 825 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
USP8-201ENST00000307179 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 QRICH2Q9H0J4 1663 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 WWC1Q8IX03 1113 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 DDX19BQ9UMR2 479 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 ZNF518AQ6AHZ1 1483 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 ERBB4Q15303 1308 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 ARHGAP5Q13017 1502 aa6.72□□□□□ -1.33
USP8-201ENST00000307179 APAF1O14727 1248 aa6.71□□□□□ -1.33
USP8-201ENST00000307179 NOL7Q9UMY1 257 aaKnown RBP6.71□□□□□ -1.33
USP8-201ENST00000307179 IL16Q14005 1332 aa6.71□□□□□ -1.33
USP8-201ENST00000307179 ZKSCAN2Q63HK3 967 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
USP8-201ENST00000307179 MED14O60244 1454 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 ABCC1P33527 1531 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 PUS7Q96PZ0 661 aaKnown RBP6.71□□□□□ -1.34
USP8-201ENST00000307179 COG6Q9Y2V7 657 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.34
USP8-201ENST00000307179 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
USP8-201ENST00000307179 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
USP8-201ENST00000307179 NUCB2P80303 420 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 SASS6Q6UVJ0 657 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 ZNF428Q96B54 188 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 PODXL2Q9NZ53 605 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 PRDM4Q9UKN5 801 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 TRAPPC8Q9Y2L5 1435 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 FRMPD1Q5SYB0 1578 aa6.7□□□□□ -1.34
USP8-201ENST00000307179 CDC42BPGQ6DT37 1551 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms