RNA–Protein interactions for RNA: ENST00000306317.6

LGI3-201, Transcript of leucine rich repeat LGI family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGI3, Length 3,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-201ENST00000306317 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
LGI3-201ENST00000306317 FOXD4L6Q3SYB3 417 aaPredicted RBP23.25■■□□□ 1.31
LGI3-201ENST00000306317 FOXD4L3Q6VB84 417 aaPredicted RBP23.25■■□□□ 1.31
LGI3-201ENST00000306317 PLXNC1O60486 1568 aa23.25■■□□□ 1.31
LGI3-201ENST00000306317 PLCH2O75038 1416 aa23.25■■□□□ 1.31
LGI3-201ENST00000306317 NKTRP30414 1462 aaKnown RBP23.25■■□□□ 1.31
LGI3-201ENST00000306317 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
LGI3-201ENST00000306317 TBC1D32Q96NH3 1257 aa23.25■■□□□ 1.31
LGI3-201ENST00000306317 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
LGI3-201ENST00000306317 MAGI2Q86UL8 1455 aa23.24■■□□□ 1.31
LGI3-201ENST00000306317 EIF2AK4Q9P2K8 1649 aaKnown RBP23.24■■□□□ 1.31
LGI3-201ENST00000306317 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
LGI3-201ENST00000306317 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
LGI3-201ENST00000306317 CHMP5Q9NZZ3 219 aa23.23■■□□□ 1.31
LGI3-201ENST00000306317 MPNDQ8N594 471 aa23.23■■□□□ 1.31
LGI3-201ENST00000306317 RBM10P98175 930 aaKnown RBP23.22■■□□□ 1.31
LGI3-201ENST00000306317 ANKRD45Q5TZF3 282 aa23.22■■□□□ 1.31
LGI3-201ENST00000306317 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
LGI3-201ENST00000306317 RBM42Q9BTD8 480 aaKnown RBP23.21■■□□□ 1.31
LGI3-201ENST00000306317 ATP10AO60312 1499 aa23.21■■□□□ 1.31
LGI3-201ENST00000306317 ZKSCAN2Q63HK3 967 aa23.21■■□□□ 1.31
LGI3-201ENST00000306317 FBLN1P23142 703 aa23.2■■□□□ 1.3
LGI3-201ENST00000306317 ZNF521Q96K83 1311 aa23.2■■□□□ 1.3
LGI3-201ENST00000306317 LAMC1P11047 1609 aa23.2■■□□□ 1.3
LGI3-201ENST00000306317 ZMYM4Q5VZL5 1548 aa23.19■■□□□ 1.3
LGI3-201ENST00000306317 GRPEL1Q9HAV7 217 aa23.19■■□□□ 1.3
LGI3-201ENST00000306317 GGT6Q6P531 493 aa23.19■■□□□ 1.3
LGI3-201ENST00000306317 ANP32BQ92688 251 aaKnown RBP23.19■■□□□ 1.3
LGI3-201ENST00000306317 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
LGI3-201ENST00000306317 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
LGI3-201ENST00000306317 NOL8Q76FK4 1167 aaKnown RBP23.18■■□□□ 1.3
LGI3-201ENST00000306317 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
LGI3-201ENST00000306317 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
LGI3-201ENST00000306317 SHROOM2Q13796 1616 aa23.16■■□□□ 1.3
LGI3-201ENST00000306317 ZMYND15Q9H091 742 aa23.15■■□□□ 1.3
LGI3-201ENST00000306317 ANTXR1Q9H6X2 564 aa23.15■■□□□ 1.3
LGI3-201ENST00000306317 ESPNB1AK53 854 aa23.14■■□□□ 1.3
LGI3-201ENST00000306317 SRPK2P78362 688 aaKnown RBP23.14■■□□□ 1.3
LGI3-201ENST00000306317 CABP2Q9NPB3 220 aa23.14■■□□□ 1.3
LGI3-201ENST00000306317 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.3
LGI3-201ENST00000306317 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.3
LGI3-201ENST00000306317 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.3
LGI3-201ENST00000306317 DDX49Q9Y6V7 483 aaKnown RBP23.14■■□□□ 1.29
LGI3-201ENST00000306317 MVPQ14764 893 aaKnown RBP23.13■■□□□ 1.29
LGI3-201ENST00000306317 INSRP06213 1382 aa23.13■■□□□ 1.29
LGI3-201ENST00000306317 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
LGI3-201ENST00000306317 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
LGI3-201ENST00000306317 SSH1Q8WYL5 1049 aa23.12■■□□□ 1.29
LGI3-201ENST00000306317 TNPO1Q92973 898 aaKnown RBP23.11■■□□□ 1.29
LGI3-201ENST00000306317 ABCC1P33527 1531 aa23.11■■□□□ 1.29
LGI3-201ENST00000306317 TRIM27P14373 513 aa23.11■■□□□ 1.29
LGI3-201ENST00000306317 MRE11P49959 708 aa23.11■■□□□ 1.29
LGI3-201ENST00000306317 FAM13BQ9NYF5 915 aa23.1■■□□□ 1.29
LGI3-201ENST00000306317 SCAF11Q99590 1463 aaKnown RBP23.1■■□□□ 1.29
LGI3-201ENST00000306317 GAS2L3Q86XJ1 694 aa23.09■■□□□ 1.29
LGI3-201ENST00000306317 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
LGI3-201ENST00000306317 KANK1Q14678 1352 aa23.09■■□□□ 1.29
LGI3-201ENST00000306317 CHAMP1Q96JM3 812 aa23.08■■□□□ 1.29
LGI3-201ENST00000306317 RNF17Q9BXT8 1623 aaKnown RBP23.07■■□□□ 1.28
LGI3-201ENST00000306317 RIPK4P57078 832 aa23.07■■□□□ 1.28
LGI3-201ENST00000306317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.07■■□□□ 1.28
LGI3-201ENST00000306317 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
LGI3-201ENST00000306317 SSFA2P28290 1259 aa23.07■■□□□ 1.28
LGI3-201ENST00000306317 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
LGI3-201ENST00000306317 MADDQ8WXG6 1647 aa23.07■■□□□ 1.28
LGI3-201ENST00000306317 HMOX1P09601 288 aa23.06■■□□□ 1.28
LGI3-201ENST00000306317 SOX12O15370 315 aa23.06■■□□□ 1.28
LGI3-201ENST00000306317 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
LGI3-201ENST00000306317 MCTP1Q6DN14 999 aa23.06■■□□□ 1.28
LGI3-201ENST00000306317 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
LGI3-201ENST00000306317 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
LGI3-201ENST00000306317 MSNP26038 577 aaKnown RBP23.05■■□□□ 1.28
LGI3-201ENST00000306317 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
LGI3-201ENST00000306317 RNF214Q8ND24 703 aa23.05■■□□□ 1.28
LGI3-201ENST00000306317 GOLGA6L22H0YM25 854 aa23.04■■□□□ 1.28
LGI3-201ENST00000306317 NSD3Q9BZ95 1437 aa23.04■■□□□ 1.28
LGI3-201ENST00000306317 PLCB2Q00722 1185 aa23.03■■□□□ 1.28
LGI3-201ENST00000306317 CAVIN1Q6NZI2 390 aaKnown RBP23.03■■□□□ 1.28
LGI3-201ENST00000306317 TRPM2O94759 1503 aa23.03■■□□□ 1.28
LGI3-201ENST00000306317 CD2BP2O95400 341 aaKnown RBP23.03■■□□□ 1.28
LGI3-201ENST00000306317 RTEL1-TNFRSF6BF6WH68 1400 aa23.02■■□□□ 1.28
LGI3-201ENST00000306317 R3HCC1Q9Y3T6 440 aaKnown RBP23.02■■□□□ 1.28
LGI3-201ENST00000306317 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.27
LGI3-201ENST00000306317 PTPRTO14522 1441 aa23.01■■□□□ 1.27
LGI3-201ENST00000306317 KIAA1211Q6ZU35 1233 aa23.01■■□□□ 1.27
LGI3-201ENST00000306317 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
LGI3-201ENST00000306317 NASPP49321 788 aaPredicted RBP23■■□□□ 1.27
LGI3-201ENST00000306317 CLTCL1P53675 1640 aa23■■□□□ 1.27
LGI3-201ENST00000306317 ATF7IPQ6VMQ6 1270 aa23■■□□□ 1.27
LGI3-201ENST00000306317 IQGAP1P46940 1657 aa23■■□□□ 1.27
LGI3-201ENST00000306317 CLCN1P35523 988 aa22.99■■□□□ 1.27
LGI3-201ENST00000306317 DDX19BQ9UMR2 479 aa22.99■■□□□ 1.27
LGI3-201ENST00000306317 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
LGI3-201ENST00000306317 ZFYVE16Q7Z3T8 1539 aa22.99■■□□□ 1.27
LGI3-201ENST00000306317 MINK1Q8N4C8 1332 aaPredicted RBP22.99■■□□□ 1.27
LGI3-201ENST00000306317 DNTTIP2Q5QJE6 756 aaKnown RBP22.97■■□□□ 1.27
LGI3-201ENST00000306317 PTMAP06454 111 aaKnown RBP22.97■■□□□ 1.27
LGI3-201ENST00000306317 SYNMO15061 1565 aa22.96■■□□□ 1.27
LGI3-201ENST00000306317 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
LGI3-201ENST00000306317 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms