RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ATAD2Q6PL18 1390 aa25.96■■□□□ 1.75
HOXC4-201ENST00000303406 RNF123Q5XPI4 1314 aa25.96■■□□□ 1.75
HOXC4-201ENST00000303406 NLRP1Q9C000 1473 aa25.95■■□□□ 1.75
HOXC4-201ENST00000303406 SLC12A5Q9H2X9 1139 aa25.94■■□□□ 1.74
HOXC4-201ENST00000303406 KNDC1Q76NI1 1749 aa25.94■■□□□ 1.74
HOXC4-201ENST00000303406 ABCC11Q96J66 1382 aa25.94■■□□□ 1.74
HOXC4-201ENST00000303406 POLR3AO14802 1390 aaPredicted RBP25.92■■□□□ 1.74
HOXC4-201ENST00000303406 WDR43Q15061 677 aaKnown RBP eCLIP25.92■■□□□ 1.74
HOXC4-201ENST00000303406 STK26Q9P289 416 aa25.92■■□□□ 1.74
HOXC4-201ENST00000303406 PRAM1Q96QH2 718 aa25.91■■□□□ 1.74
HOXC4-201ENST00000303406 CGNL1Q0VF96 1302 aa25.91■■□□□ 1.74
HOXC4-201ENST00000303406 POGKQ9P215 609 aa25.9■■□□□ 1.74
HOXC4-201ENST00000303406 BCANQ96GW7 911 aa25.89■■□□□ 1.74
HOXC4-201ENST00000303406 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.73
HOXC4-201ENST00000303406 SIRT1Q96EB6 747 aa25.88■■□□□ 1.73
HOXC4-201ENST00000303406 ADAMTS8Q9UP79 889 aa25.88■■□□□ 1.73
HOXC4-201ENST00000303406 TECPR2O15040 1411 aa25.88■■□□□ 1.73
HOXC4-201ENST00000303406 CABP2Q9NPB3 220 aa25.87■■□□□ 1.73
HOXC4-201ENST00000303406 C3P01024 1663 aa25.85■■□□□ 1.73
HOXC4-201ENST00000303406 FAM135BQ49AJ0 1406 aa25.85■■□□□ 1.73
HOXC4-201ENST00000303406 MED14O60244 1454 aa25.84■■□□□ 1.73
HOXC4-201ENST00000303406 MORC1Q86VD1 984 aa25.84■■□□□ 1.73
HOXC4-201ENST00000303406 CPS1P31327 1500 aa25.84■■□□□ 1.73
HOXC4-201ENST00000303406 FER1L4A9Z1Z3 1794 aa25.84■■□□□ 1.73
HOXC4-201ENST00000303406 SRPK2P78362 688 aaKnown RBP25.83■■□□□ 1.73
HOXC4-201ENST00000303406 PPP4R2Q9NY27 417 aa25.83■■□□□ 1.72
HOXC4-201ENST00000303406 ANKRD26Q9UPS8 1709 aa25.82■■□□□ 1.72
HOXC4-201ENST00000303406 NGEFQ8N5V2 710 aa25.82■■□□□ 1.72
HOXC4-201ENST00000303406 MINK1Q8N4C8 1332 aaPredicted RBP25.82■■□□□ 1.72
HOXC4-201ENST00000303406 A0A1W2PP64 1363 aa25.82■■□□□ 1.72
HOXC4-201ENST00000303406 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
HOXC4-201ENST00000303406 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
HOXC4-201ENST00000303406 CD163L1Q9NR16 1453 aa25.8■■□□□ 1.72
HOXC4-201ENST00000303406 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
HOXC4-201ENST00000303406 SHPRHQ149N8 1683 aa25.79■■□□□ 1.72
HOXC4-201ENST00000303406 SLIT1O75093 1534 aa25.79■■□□□ 1.72
HOXC4-201ENST00000303406 ATP7BP35670 1465 aa25.79■■□□□ 1.72
HOXC4-201ENST00000303406 METP08581 1390 aa25.78■■□□□ 1.72
HOXC4-201ENST00000303406 CDK19Q9BWU1 502 aa25.78■■□□□ 1.72
HOXC4-201ENST00000303406 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
HOXC4-201ENST00000303406 ZNF521Q96K83 1311 aa25.76■■□□□ 1.71
HOXC4-201ENST00000303406 IRX6P78412 446 aaPredicted RBP25.76■■□□□ 1.71
HOXC4-201ENST00000303406 ADAMTS13Q76LX8 1427 aa25.76■■□□□ 1.71
HOXC4-201ENST00000303406 HDGFL2Q7Z4V5 671 aaPredicted RBP25.73■■□□□ 1.71
HOXC4-201ENST00000303406 PLEKHH1Q9ULM0 1364 aa25.73■■□□□ 1.71
HOXC4-201ENST00000303406 TRHP20396 242 aaPredicted RBP25.72■■□□□ 1.71
HOXC4-201ENST00000303406 KIF20BQ96Q89 1820 aa25.71■■□□□ 1.71
HOXC4-201ENST00000303406 CFAP53Q96M91 514 aa25.71■■□□□ 1.71
HOXC4-201ENST00000303406 RCAN3Q9UKA8 241 aa25.71■■□□□ 1.71
HOXC4-201ENST00000303406 ADGRB2O60241 1585 aa25.71■■□□□ 1.71
HOXC4-201ENST00000303406 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
HOXC4-201ENST00000303406 SALL2Q9Y467 1007 aaPredicted RBP25.7■■□□□ 1.7
HOXC4-201ENST00000303406 WAPLQ7Z5K2 1190 aa25.69■■□□□ 1.7
HOXC4-201ENST00000303406 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
HOXC4-201ENST00000303406 WASLO00401 505 aaPredicted RBP25.68■■□□□ 1.7
HOXC4-201ENST00000303406 CDCA7LQ96GN5 454 aa25.68■■□□□ 1.7
HOXC4-201ENST00000303406 RRP1P56182 461 aaKnown RBP25.67■■□□□ 1.7
HOXC4-201ENST00000303406 NCBP3Q53F19 620 aaKnown RBP25.67■■□□□ 1.7
HOXC4-201ENST00000303406 EID1Q9Y6B2 187 aa25.65■■□□□ 1.7
HOXC4-201ENST00000303406 CPSF1Q10570 1443 aaKnown RBP25.64■■□□□ 1.7
HOXC4-201ENST00000303406 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.7
HOXC4-201ENST00000303406 MTHFSP49914 203 aa25.64■■□□□ 1.7
HOXC4-201ENST00000303406 GOLGA2Q08379 1002 aa25.64■■□□□ 1.7
HOXC4-201ENST00000303406 CABP1Q9NZU7 370 aa25.64■■□□□ 1.7
HOXC4-201ENST00000303406 FYB1O15117 783 aa25.63■■□□□ 1.69
HOXC4-201ENST00000303406 LTKP29376 864 aa25.63■■□□□ 1.69
HOXC4-201ENST00000303406 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
HOXC4-201ENST00000303406 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
HOXC4-201ENST00000303406 IQSEC2Q5JU85 1478 aa25.61■■□□□ 1.69
HOXC4-201ENST00000303406 TRMT2AQ8IZ69 625 aaKnown RBP25.61■■□□□ 1.69
HOXC4-201ENST00000303406 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
HOXC4-201ENST00000303406 EDC4Q6P2E9 1401 aaKnown RBP25.61■■□□□ 1.69
HOXC4-201ENST00000303406 APAF1O14727 1248 aa25.6■■□□□ 1.69
HOXC4-201ENST00000303406 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
HOXC4-201ENST00000303406 MON2Q7Z3U7 1717 aa25.6■■□□□ 1.69
HOXC4-201ENST00000303406 SLFN5Q08AF3 891 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 DUSP27Q5VZP5 1158 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 RUNDC1Q96C34 613 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 TSHZ2Q9NRE2 1034 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 PPIP5K1Q6PFW1 1433 aa25.59■■□□□ 1.69
HOXC4-201ENST00000303406 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
HOXC4-201ENST00000303406 AKAP12Q02952 1782 aa25.58■■□□□ 1.69
HOXC4-201ENST00000303406 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
HOXC4-201ENST00000303406 PTCH1Q13635 1447 aa25.58■■□□□ 1.68
HOXC4-201ENST00000303406 GGNBP2Q9H3C7 697 aa25.57■■□□□ 1.68
HOXC4-201ENST00000303406 TOPAZ1Q8N9V7 1692 aa25.56■■□□□ 1.68
HOXC4-201ENST00000303406 CEP170BQ9Y4F5 1589 aaPredicted RBP25.56■■□□□ 1.68
HOXC4-201ENST00000303406 ITSN1Q15811 1721 aa25.55■■□□□ 1.68
HOXC4-201ENST00000303406 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.55■■□□□ 1.68
HOXC4-201ENST00000303406 NUDT16Q96DE0 195 aaKnown RBP25.55■■□□□ 1.68
HOXC4-201ENST00000303406 CCDC61Q9Y6R9 512 aa25.55■■□□□ 1.68
HOXC4-201ENST00000303406 PNPLA6Q8IY17 1366 aa25.54■■□□□ 1.68
HOXC4-201ENST00000303406 E9PSI1 815 aa25.54■■□□□ 1.68
HOXC4-201ENST00000303406 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
HOXC4-201ENST00000303406 RIMS1Q86UR5 1692 aaKnown RBP25.53■■□□□ 1.68
HOXC4-201ENST00000303406 ZNF142P52746 1687 aaPredicted RBP25.53■■□□□ 1.68
HOXC4-201ENST00000303406 ADAMTSL3P82987 1691 aa25.53■■□□□ 1.68
HOXC4-201ENST00000303406 CCDC27Q2M243 656 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms