RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 BCANQ96GW7 911 aa35.44■■■■□ 3.26
PHOX2A-201ENST00000298231 PUS7Q96PZ0 661 aaKnown RBP35.43■■■■□ 3.26
PHOX2A-201ENST00000298231 USP32Q8NFA0 1604 aa35.4■■■■□ 3.26
PHOX2A-201ENST00000298231 LTKP29376 864 aa35.39■■■■□ 3.26
PHOX2A-201ENST00000298231 NPHP4O75161 1426 aaPredicted RBP35.38■■■■□ 3.25
PHOX2A-201ENST00000298231 PDE3BQ13370 1112 aa35.38■■■■□ 3.25
PHOX2A-201ENST00000298231 TXNDC2Q86VQ3 553 aa35.38■■■■□ 3.25
PHOX2A-201ENST00000298231 EID1Q9Y6B2 187 aa35.38■■■■□ 3.25
PHOX2A-201ENST00000298231 PPP2R1AP30153 589 aa35.34■■■■□ 3.25
PHOX2A-201ENST00000298231 RNF123Q5XPI4 1314 aa35.34■■■■□ 3.25
PHOX2A-201ENST00000298231 RIMS2Q9UQ26 1411 aa35.34■■■■□ 3.25
PHOX2A-201ENST00000298231 TRAK1Q9UPV9 953 aa35.32■■■■□ 3.24
PHOX2A-201ENST00000298231 HDGFP51858 240 aaKnown RBP35.28■■■■□ 3.24
PHOX2A-201ENST00000298231 TULP4Q9NRJ4 1543 aa35.28■■■■□ 3.24
PHOX2A-201ENST00000298231 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.27■■■■□ 3.24
PHOX2A-201ENST00000298231 PPP4R2Q9NY27 417 aa35.27■■■■□ 3.24
PHOX2A-201ENST00000298231 NINLQ9Y2I6 1382 aa35.24■■■■□ 3.23
PHOX2A-201ENST00000298231 EVC2Q86UK5 1308 aa35.24■■■■□ 3.23
PHOX2A-201ENST00000298231 TMEM132EQ6IEE7 984 aa35.24■■■■□ 3.23
PHOX2A-201ENST00000298231 PLEKHG1Q9ULL1 1385 aa35.22■■■■□ 3.23
PHOX2A-201ENST00000298231 ALKQ9UM73 1620 aa35.2■■■■□ 3.23
PHOX2A-201ENST00000298231 LTBP4Q8N2S1 1624 aa35.18■■■■□ 3.22
PHOX2A-201ENST00000298231 WDR43Q15061 677 aaKnown RBP eCLIP35.17■■■■□ 3.22
PHOX2A-201ENST00000298231 CARD14Q9BXL6 1004 aa35.17■■■■□ 3.22
PHOX2A-201ENST00000298231 NSD3Q9BZ95 1437 aa35.17■■■■□ 3.22
PHOX2A-201ENST00000298231 YTHDC2Q9H6S0 1430 aaKnown RBP35.16■■■■□ 3.22
PHOX2A-201ENST00000298231 DLC1Q96QB1 1528 aa35.16■■■■□ 3.22
PHOX2A-201ENST00000298231 IRX6P78412 446 aaPredicted RBP35.15■■■■□ 3.22
PHOX2A-201ENST00000298231 ZNF335Q9H4Z2 1342 aaPredicted RBP35.15■■■■□ 3.22
PHOX2A-201ENST00000298231 NSD2O96028 1365 aa35.15■■■■□ 3.22
PHOX2A-201ENST00000298231 ANKRD36BQ8N2N9 1353 aa35.14■■■■□ 3.22
PHOX2A-201ENST00000298231 NUTM2DQ5VT03 806 aaPredicted RBP35.13■■■■□ 3.21
PHOX2A-201ENST00000298231 TSHZ2Q9NRE2 1034 aa35.13■■■■□ 3.21
PHOX2A-201ENST00000298231 SETD1AO15047 1707 aaKnown RBP35.11■■■■□ 3.21
PHOX2A-201ENST00000298231 POLR3AO14802 1390 aaPredicted RBP35.09■■■■□ 3.21
PHOX2A-201ENST00000298231 ADAMTS8Q9UP79 889 aa35.08■■■■□ 3.21
PHOX2A-201ENST00000298231 ATAD2Q6PL18 1390 aa35.08■■■■□ 3.21
PHOX2A-201ENST00000298231 DIP2AQ14689 1571 aa35.07■■■■□ 3.2
PHOX2A-201ENST00000298231 ADAMTS13Q76LX8 1427 aa35.07■■■■□ 3.2
PHOX2A-201ENST00000298231 SLC26A8Q96RN1 970 aa35.06■■■■□ 3.2
PHOX2A-201ENST00000298231 CGNL1Q0VF96 1302 aa35.05■■■■□ 3.2
PHOX2A-201ENST00000298231 NRXN3Q9Y4C0 1643 aa35.05■■■■□ 3.2
PHOX2A-201ENST00000298231 CPS1P31327 1500 aa35.04■■■■□ 3.2
PHOX2A-201ENST00000298231 NGEFQ8N5V2 710 aa35.02■■■■□ 3.2
PHOX2A-201ENST00000298231 TBX22Q9Y458 520 aa35.02■■■■□ 3.2
PHOX2A-201ENST00000298231 STRCP1A6NGW2 1772 aa35.02■■■■□ 3.2
PHOX2A-201ENST00000298231 SLC12A5Q9H2X9 1139 aa35.01■■■■□ 3.2
PHOX2A-201ENST00000298231 CERKQ8TCT0 537 aa35.01■■■■□ 3.19
PHOX2A-201ENST00000298231 SENP3Q9H4L4 574 aaPredicted RBP34.98■■■■□ 3.19
PHOX2A-201ENST00000298231 RCAN3Q9UKA8 241 aa34.98■■■■□ 3.19
PHOX2A-201ENST00000298231 KNDC1Q76NI1 1749 aa34.97■■■■□ 3.19
PHOX2A-201ENST00000298231 NWD1Q149M9 1564 aa34.96■■■■□ 3.19
PHOX2A-201ENST00000298231 SHPRHQ149N8 1683 aa34.96■■■■□ 3.19
PHOX2A-201ENST00000298231 MORC1Q86VD1 984 aa34.95■■■■□ 3.19
PHOX2A-201ENST00000298231 IQSEC2Q5JU85 1478 aa34.95■■■■□ 3.19
PHOX2A-201ENST00000298231 ANKRD26Q9UPS8 1709 aa34.95■■■■□ 3.19
PHOX2A-201ENST00000298231 RRP1P56182 461 aaKnown RBP34.95■■■■□ 3.18
PHOX2A-201ENST00000298231 ZNF521Q96K83 1311 aa34.95■■■■□ 3.18
PHOX2A-201ENST00000298231 ABCC11Q96J66 1382 aa34.95■■■■□ 3.18
PHOX2A-201ENST00000298231 PIK3R4Q99570 1358 aa34.95■■■■□ 3.18
PHOX2A-201ENST00000298231 ILDR1Q86SU0 546 aaPredicted RBP34.93■■■■□ 3.18
PHOX2A-201ENST00000298231 KCNA6P17658 529 aa34.92■■■■□ 3.18
PHOX2A-201ENST00000298231 PRAM1Q96QH2 718 aa34.92■■■■□ 3.18
PHOX2A-201ENST00000298231 CHD2O14647 1828 aaKnown RBP34.92■■■■□ 3.18
PHOX2A-201ENST00000298231 POGKQ9P215 609 aa34.92■■■■□ 3.18
PHOX2A-201ENST00000298231 STK26Q9P289 416 aa34.92■■■■□ 3.18
PHOX2A-201ENST00000298231 PLEKHH1Q9ULM0 1364 aa34.9■■■■□ 3.18
PHOX2A-201ENST00000298231 SENP3-EIF4A1A0A087X0R7 540 aa34.9■■■■□ 3.18
PHOX2A-201ENST00000298231 SALL2Q9Y467 1007 aaPredicted RBP34.89■■■■□ 3.18
PHOX2A-201ENST00000298231 NKTRP30414 1462 aaKnown RBP34.89■■■■□ 3.18
PHOX2A-201ENST00000298231 CABP2Q9NPB3 220 aa34.89■■■■□ 3.18
PHOX2A-201ENST00000298231 A0A1W2PP64 1363 aa34.88■■■■□ 3.17
PHOX2A-201ENST00000298231 LRRC7Q96NW7 1537 aa34.88■■■■□ 3.17
PHOX2A-201ENST00000298231 SRPK2P78362 688 aaKnown RBP34.86■■■■□ 3.17
PHOX2A-201ENST00000298231 CDCA7LQ96GN5 454 aa34.86■■■■□ 3.17
PHOX2A-201ENST00000298231 TECPR2O15040 1411 aa34.85■■■■□ 3.17
PHOX2A-201ENST00000298231 TERF2IPQ9NYB0 399 aa34.85■■■■□ 3.17
PHOX2A-201ENST00000298231 METP08581 1390 aa34.83■■■■□ 3.17
PHOX2A-201ENST00000298231 ATP7BP35670 1465 aa34.83■■■■□ 3.17
PHOX2A-201ENST00000298231 CD163L1Q9NR16 1453 aa34.83■■■■□ 3.17
PHOX2A-201ENST00000298231 CFAP53Q96M91 514 aa34.82■■■■□ 3.16
PHOX2A-201ENST00000298231 PTPRUQ92729 1446 aa34.82■■■■□ 3.16
PHOX2A-201ENST00000298231 GOLGA2Q08379 1002 aa34.81■■■■□ 3.16
PHOX2A-201ENST00000298231 FAM135BQ49AJ0 1406 aa34.81■■■■□ 3.16
PHOX2A-201ENST00000298231 MINK1Q8N4C8 1332 aaPredicted RBP34.81■■■■□ 3.16
PHOX2A-201ENST00000298231 SAFB2Q14151 953 aaKnown RBP eCLIP34.8■■■■□ 3.16
PHOX2A-201ENST00000298231 B4GALNT3Q6L9W6 998 aa34.8■■■■□ 3.16
PHOX2A-201ENST00000298231 XRN1Q8IZH2 1706 aaKnown RBP34.8■■■■□ 3.16
PHOX2A-201ENST00000298231 SIRT1Q96EB6 747 aa34.79■■■■□ 3.16
PHOX2A-201ENST00000298231 KIF20BQ96Q89 1820 aa34.78■■■■□ 3.16
PHOX2A-201ENST00000298231 XIRP1Q702N8 1843 aaKnown RBP34.75■■■■□ 3.15
PHOX2A-201ENST00000298231 AMOTL2Q9Y2J4 779 aa34.75■■■■□ 3.15
PHOX2A-201ENST00000298231 NCBP3Q53F19 620 aaKnown RBP34.74■■■■□ 3.15
PHOX2A-201ENST00000298231 DUSP27Q5VZP5 1158 aa34.74■■■■□ 3.15
PHOX2A-201ENST00000298231 HDGFL2Q7Z4V5 671 aaPredicted RBP34.74■■■■□ 3.15
PHOX2A-201ENST00000298231 CCDC136Q96JN2 1154 aa34.73■■■■□ 3.15
PHOX2A-201ENST00000298231 CDK19Q9BWU1 502 aa34.73■■■■□ 3.15
PHOX2A-201ENST00000298231 TMEM94Q12767 1356 aa34.72■■■■□ 3.15
PHOX2A-201ENST00000298231 PROSER2Q86WR7 435 aaPredicted RBP34.72■■■■□ 3.15
PHOX2A-201ENST00000298231 SLFN5Q08AF3 891 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms