RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PLEKHH1Q9ULM0 1364 aa28.88■■■□□ 2.21
SOX17-201ENST00000297316 TXNDC2Q86VQ3 553 aa28.87■■■□□ 2.21
SOX17-201ENST00000297316 NLRP13Q86W25 1043 aa28.86■■■□□ 2.21
SOX17-201ENST00000297316 ADAMTSL3P82987 1691 aa28.85■■■□□ 2.21
SOX17-201ENST00000297316 FKBP8Q14318 412 aa28.85■■■□□ 2.21
SOX17-201ENST00000297316 ADAMTS13Q76LX8 1427 aa28.84■■■□□ 2.21
SOX17-201ENST00000297316 SRPK2P78362 688 aaKnown RBP28.83■■■□□ 2.21
SOX17-201ENST00000297316 ABCC11Q96J66 1382 aa28.82■■■□□ 2.2
SOX17-201ENST00000297316 DLC1Q96QB1 1528 aa28.82■■■□□ 2.2
SOX17-201ENST00000297316 SENP3-EIF4A1A0A087X0R7 540 aa28.81■■■□□ 2.2
SOX17-201ENST00000297316 SLIT1O75093 1534 aa28.8■■■□□ 2.2
SOX17-201ENST00000297316 ARHGAP23Q9P227 1491 aa28.8■■■□□ 2.2
SOX17-201ENST00000297316 PLEKHG1Q9ULL1 1385 aa28.8■■■□□ 2.2
SOX17-201ENST00000297316 SLC26A8Q96RN1 970 aa28.79■■■□□ 2.2
SOX17-201ENST00000297316 NSD3Q9BZ95 1437 aa28.79■■■□□ 2.2
SOX17-201ENST00000297316 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
SOX17-201ENST00000297316 THEMISQ8N1K5 641 aaPredicted RBP28.77■■■□□ 2.2
SOX17-201ENST00000297316 PUS7Q96PZ0 661 aaKnown RBP28.77■■■□□ 2.2
SOX17-201ENST00000297316 PPP2R1AP30153 589 aa28.76■■■□□ 2.2
SOX17-201ENST00000297316 CDK19Q9BWU1 502 aa28.76■■■□□ 2.2
SOX17-201ENST00000297316 CEP170BQ9Y4F5 1589 aaPredicted RBP28.76■■■□□ 2.19
SOX17-201ENST00000297316 NPC1L1Q9UHC9 1359 aa28.76■■■□□ 2.19
SOX17-201ENST00000297316 KNDC1Q76NI1 1749 aa28.75■■■□□ 2.19
SOX17-201ENST00000297316 NEFLP07196 543 aa28.71■■■□□ 2.19
SOX17-201ENST00000297316 MED14O60244 1454 aa28.71■■■□□ 2.19
SOX17-201ENST00000297316 ANKRD36BQ8N2N9 1353 aa28.71■■■□□ 2.19
SOX17-201ENST00000297316 TECPR2O15040 1411 aa28.7■■■□□ 2.19
SOX17-201ENST00000297316 ROBO2Q9HCK4 1378 aa28.69■■■□□ 2.18
SOX17-201ENST00000297316 CPS1P31327 1500 aa28.69■■■□□ 2.18
SOX17-201ENST00000297316 PTPRUQ92729 1446 aa28.68■■■□□ 2.18
SOX17-201ENST00000297316 A0A1W2PP64 1363 aa28.68■■■□□ 2.18
SOX17-201ENST00000297316 ATAD2Q6PL18 1390 aa28.68■■■□□ 2.18
SOX17-201ENST00000297316 FAM135BQ49AJ0 1406 aa28.65■■■□□ 2.18
SOX17-201ENST00000297316 CD163L1Q9NR16 1453 aa28.65■■■□□ 2.18
SOX17-201ENST00000297316 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.18
SOX17-201ENST00000297316 CABP1Q9NZU7 370 aa28.64■■■□□ 2.18
SOX17-201ENST00000297316 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
SOX17-201ENST00000297316 TNNT2P45379 298 aaPredicted RBP28.63■■■□□ 2.17
SOX17-201ENST00000297316 ZNF142P52746 1687 aaPredicted RBP28.62■■■□□ 2.17
SOX17-201ENST00000297316 WASLO00401 505 aaPredicted RBP28.62■■■□□ 2.17
SOX17-201ENST00000297316 SIRT1Q96EB6 747 aa28.62■■■□□ 2.17
SOX17-201ENST00000297316 IRX6P78412 446 aaPredicted RBP28.61■■■□□ 2.17
SOX17-201ENST00000297316 NINLQ9Y2I6 1382 aa28.61■■■□□ 2.17
SOX17-201ENST00000297316 SMG6Q86US8 1419 aaKnown RBP28.61■■■□□ 2.17
SOX17-201ENST00000297316 CGNL1Q0VF96 1302 aa28.61■■■□□ 2.17
SOX17-201ENST00000297316 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.6■■■□□ 2.17
SOX17-201ENST00000297316 TBX22Q9Y458 520 aa28.6■■■□□ 2.17
SOX17-201ENST00000297316 MORC1Q86VD1 984 aa28.6■■■□□ 2.17
SOX17-201ENST00000297316 AMOTL2Q9Y2J4 779 aa28.59■■■□□ 2.17
SOX17-201ENST00000297316 NCKAP5LQ9HCH0 1330 aa28.59■■■□□ 2.17
SOX17-201ENST00000297316 TERF2IPQ9NYB0 399 aa28.57■■■□□ 2.16
SOX17-201ENST00000297316 BLMP54132 1417 aaPredicted RBP28.56■■■□□ 2.16
SOX17-201ENST00000297316 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
SOX17-201ENST00000297316 ADAMTS8Q9UP79 889 aa28.55■■■□□ 2.16
SOX17-201ENST00000297316 SALL2Q9Y467 1007 aaPredicted RBP28.54■■■□□ 2.16
SOX17-201ENST00000297316 DIP2AQ14689 1571 aa28.53■■■□□ 2.16
SOX17-201ENST00000297316 NUDT16Q96DE0 195 aaKnown RBP28.52■■■□□ 2.16
SOX17-201ENST00000297316 GGNBP2Q9H3C7 697 aa28.52■■■□□ 2.16
SOX17-201ENST00000297316 HDGFL2Q7Z4V5 671 aaPredicted RBP28.52■■■□□ 2.16
SOX17-201ENST00000297316 ANKLE2Q86XL3 938 aa28.52■■■□□ 2.16
SOX17-201ENST00000297316 PPIP5K1Q6PFW1 1433 aa28.51■■■□□ 2.15
SOX17-201ENST00000297316 PRR36Q9H6K5 1346 aa28.51■■■□□ 2.15
SOX17-201ENST00000297316 INSRP06213 1382 aa28.5■■■□□ 2.15
SOX17-201ENST00000297316 NUTM2FA1L443 756 aa28.5■■■□□ 2.15
SOX17-201ENST00000297316 FYB1O15117 783 aa28.48■■■□□ 2.15
SOX17-201ENST00000297316 WDR43Q15061 677 aaKnown RBP eCLIP28.48■■■□□ 2.15
SOX17-201ENST00000297316 XRN1Q8IZH2 1706 aaKnown RBP28.48■■■□□ 2.15
SOX17-201ENST00000297316 ADGRB2O60241 1585 aa28.47■■■□□ 2.15
SOX17-201ENST00000297316 NSD2O96028 1365 aa28.47■■■□□ 2.15
SOX17-201ENST00000297316 ATP7BP35670 1465 aa28.47■■■□□ 2.15
SOX17-201ENST00000297316 KCNA6P17658 529 aa28.46■■■□□ 2.15
SOX17-201ENST00000297316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.46■■■□□ 2.15
SOX17-201ENST00000297316 PTCH1Q13635 1447 aa28.45■■■□□ 2.14
SOX17-201ENST00000297316 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
SOX17-201ENST00000297316 KIF20BQ96Q89 1820 aa28.44■■■□□ 2.14
SOX17-201ENST00000297316 MTHFSP49914 203 aa28.43■■■□□ 2.14
SOX17-201ENST00000297316 ANKRD26Q9UPS8 1709 aa28.43■■■□□ 2.14
SOX17-201ENST00000297316 CPSF1Q10570 1443 aaKnown RBP28.42■■■□□ 2.14
SOX17-201ENST00000297316 POLR3AO14802 1390 aaPredicted RBP28.41■■■□□ 2.14
SOX17-201ENST00000297316 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
SOX17-201ENST00000297316 CHD2O14647 1828 aaKnown RBP28.4■■■□□ 2.14
SOX17-201ENST00000297316 SHPRHQ149N8 1683 aa28.39■■■□□ 2.14
SOX17-201ENST00000297316 CCDC146Q8IYE0 955 aa28.39■■■□□ 2.14
SOX17-201ENST00000297316 MYT1Q01538 1121 aa28.38■■■□□ 2.13
SOX17-201ENST00000297316 ITSN1Q15811 1721 aa28.38■■■□□ 2.13
SOX17-201ENST00000297316 CDCA7LQ96GN5 454 aa28.37■■■□□ 2.13
SOX17-201ENST00000297316 AKAP12Q02952 1782 aa28.37■■■□□ 2.13
SOX17-201ENST00000297316 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
SOX17-201ENST00000297316 RBM33Q96EV2 1170 aaKnown RBP28.37■■■□□ 2.13
SOX17-201ENST00000297316 MON2Q7Z3U7 1717 aa28.37■■■□□ 2.13
SOX17-201ENST00000297316 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
SOX17-201ENST00000297316 TOPAZ1Q8N9V7 1692 aa28.36■■■□□ 2.13
SOX17-201ENST00000297316 RNF123Q5XPI4 1314 aa28.35■■■□□ 2.13
SOX17-201ENST00000297316 FBLN1P23142 703 aa28.35■■■□□ 2.13
SOX17-201ENST00000297316 ZRANB1Q9UGI0 708 aa28.35■■■□□ 2.13
SOX17-201ENST00000297316 NPHP4O75161 1426 aaPredicted RBP28.35■■■□□ 2.13
SOX17-201ENST00000297316 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
SOX17-201ENST00000297316 EDC4Q6P2E9 1401 aaKnown RBP28.34■■■□□ 2.13
SOX17-201ENST00000297316 NME9Q86XW9 330 aa28.34■■■□□ 2.13
SOX17-201ENST00000297316 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms