RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 NLRP6P59044 892 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 DIAPH1O60610 1272 aaKnown RBP12.32□□□□□ -0.44
KPNB1-201ENST00000290158 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
KPNB1-201ENST00000290158 GPRASP1Q5JY77 1395 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
KPNB1-201ENST00000290158 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
KPNB1-201ENST00000290158 HOMER1Q86YM7 354 aa12.31□□□□□ -0.44
KPNB1-201ENST00000290158 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
KPNB1-201ENST00000290158 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
KPNB1-201ENST00000290158 HSP90B2PQ58FF3 399 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 MYOM3Q5VTT5 1437 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 MNS1Q8NEH6 495 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 KDM4AO75164 1064 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 FYB1O15117 783 aa12.3□□□□□ -0.44
KPNB1-201ENST00000290158 CUX1P39880 1505 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 USP47Q96K76 1375 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 TRAK2O60296 914 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 TCEAL9Q9UHQ7 104 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 KIF3AQ9Y496 699 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 AK7Q96M32 723 aa12.29□□□□□ -0.44
KPNB1-201ENST00000290158 NUCB2P80303 420 aa12.28□□□□□ -0.44
KPNB1-201ENST00000290158 TSPYL4Q9UJ04 414 aa12.28□□□□□ -0.44
KPNB1-201ENST00000290158 H0YHG0 523 aa12.28□□□□□ -0.44
KPNB1-201ENST00000290158 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
KPNB1-201ENST00000290158 TPM1P09493 284 aa12.28□□□□□ -0.44
KPNB1-201ENST00000290158 RIPK4P57078 832 aa12.28□□□□□ -0.44
KPNB1-201ENST00000290158 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.44
KPNB1-201ENST00000290158 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
KPNB1-201ENST00000290158 FAM184AQ8NB25 1140 aa12.27□□□□□ -0.45
KPNB1-201ENST00000290158 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
KPNB1-201ENST00000290158 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
KPNB1-201ENST00000290158 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.45
KPNB1-201ENST00000290158 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
KPNB1-201ENST00000290158 CEP89Q96ST8 783 aa12.27□□□□□ -0.45
KPNB1-201ENST00000290158 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
KPNB1-201ENST00000290158 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
KPNB1-201ENST00000290158 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
KPNB1-201ENST00000290158 LEKR1Q6ZMV7 388 aa12.26□□□□□ -0.45
KPNB1-201ENST00000290158 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
KPNB1-201ENST00000290158 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
KPNB1-201ENST00000290158 UQCRHLA0A096LP55 91 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
KPNB1-201ENST00000290158 UQCRHP07919 91 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 ANKLE2Q86XL3 938 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 COG6Q9Y2V7 657 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
KPNB1-201ENST00000290158 RUFY1Q96T51 708 aa12.25□□□□□ -0.45
KPNB1-201ENST00000290158 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
KPNB1-201ENST00000290158 ANO2Q9NQ90 1003 aa12.24□□□□□ -0.45
KPNB1-201ENST00000290158 POGZQ7Z3K3 1410 aa12.24□□□□□ -0.45
KPNB1-201ENST00000290158 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
KPNB1-201ENST00000290158 CDR1P51861 262 aa12.23□□□□□ -0.45
KPNB1-201ENST00000290158 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
KPNB1-201ENST00000290158 ERCC4Q92889 916 aaPredicted RBP12.23□□□□□ -0.45
KPNB1-201ENST00000290158 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
KPNB1-201ENST00000290158 TOPBP1Q92547 1522 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
KPNB1-201ENST00000290158 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
KPNB1-201ENST00000290158 ESPNB1AK53 854 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 ANKRD50Q9ULJ7 1429 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
KPNB1-201ENST00000290158 PDCL3Q9H2J4 239 aa12.22□□□□□ -0.45
KPNB1-201ENST00000290158 APAF1O14727 1248 aa12.21□□□□□ -0.45
KPNB1-201ENST00000290158 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
KPNB1-201ENST00000290158 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
KPNB1-201ENST00000290158 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.46
KPNB1-201ENST00000290158 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.46
KPNB1-201ENST00000290158 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 SASS6Q6UVJ0 657 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 DEF6Q9H4E7 631 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 REC8O95072 547 aa12.2□□□□□ -0.46
KPNB1-201ENST00000290158 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
KPNB1-201ENST00000290158 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
KPNB1-201ENST00000290158 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 LETM1O95202 739 aaPredicted RBP12.19□□□□□ -0.46
KPNB1-201ENST00000290158 USP8P40818 1118 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■□□□ 11.4
KPNB1-201ENST00000290158 RNF214Q8ND24 703 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
KPNB1-201ENST00000290158 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
KPNB1-201ENST00000290158 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms