RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
VPS8-201ENST00000287546 KIDINS220Q9ULH0 1771 aa8.88□□□□□ -0.99
VPS8-201ENST00000287546 MSH5O43196 834 aa8.88□□□□□ -0.99
VPS8-201ENST00000287546 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 LMTK2Q8IWU2 1503 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 PPM1GO15355 546 aaPredicted RBP8.87□□□□□ -0.99
VPS8-201ENST00000287546 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 NPATQ14207 1427 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 CNKSR2Q8WXI2 1034 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 RUNDC1Q96C34 613 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
VPS8-201ENST00000287546 E9PCH4 1651 aa8.86□□□□□ -0.99
VPS8-201ENST00000287546 ANP32BQ92688 251 aaKnown RBP8.86□□□□□ -0.99
VPS8-201ENST00000287546 PPRC1Q5VV67 1664 aaKnown RBP8.86□□□□□ -0.99
VPS8-201ENST00000287546 UPF2Q9HAU5 1272 aaKnown RBP8.86□□□□□ -0.99
VPS8-201ENST00000287546 ABCA6Q8N139 1617 aa8.86□□□□□ -0.99
VPS8-201ENST00000287546 NSD3Q9BZ95 1437 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 TCERG1O14776 1098 aaKnown RBP8.85□□□□□ -0.99
VPS8-201ENST00000287546 FTSJ3Q8IY81 847 aaKnown RBP8.85□□□□□ -0.99
VPS8-201ENST00000287546 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
VPS8-201ENST00000287546 CCDC146Q8IYE0 955 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
VPS8-201ENST00000287546 CLTCL1P53675 1640 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 PIK3C2GO75747 1445 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 CEP152O94986 1710 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 APAF1O14727 1248 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 LMOD3Q0VAK6 560 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
VPS8-201ENST00000287546 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
VPS8-201ENST00000287546 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
VPS8-201ENST00000287546 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
VPS8-201ENST00000287546 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
VPS8-201ENST00000287546 NEURL4Q96JN8 1562 aa8.84□□□□□ -0.99
VPS8-201ENST00000287546 RICTORQ6R327 1708 aa8.84□□□□□ -0.99
VPS8-201ENST00000287546 LRPPRCP42704 1394 aaKnown RBP8.84□□□□□ -0.99
VPS8-201ENST00000287546 RBM19Q9Y4C8 960 aaKnown RBP8.83□□□□□ -1
VPS8-201ENST00000287546 SYNMO15061 1565 aa8.83□□□□□ -1
VPS8-201ENST00000287546 ABCC3O15438 1527 aa8.83□□□□□ -1
VPS8-201ENST00000287546 DEPDC5O75140 1603 aa8.83□□□□□ -1
VPS8-201ENST00000287546 RNF17Q9BXT8 1623 aaKnown RBP8.83□□□□□ -1
VPS8-201ENST00000287546 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
VPS8-201ENST00000287546 FRMPD1Q5SYB0 1578 aa8.83□□□□□ -1
VPS8-201ENST00000287546 IPO8O15397 1037 aaKnown RBP8.83□□□□□ -1
VPS8-201ENST00000287546 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
VPS8-201ENST00000287546 COG3Q96JB2 828 aa8.83□□□□□ -1
VPS8-201ENST00000287546 BCORL1Q5H9F3 1711 aa8.83□□□□□ -1
VPS8-201ENST00000287546 AAMPQ13685 434 aa8.83□□□□□ -1
VPS8-201ENST00000287546 MADDQ8WXG6 1647 aa8.83□□□□□ -1
VPS8-201ENST00000287546 DIAPH1O60610 1272 aaKnown RBP8.82□□□□□ -1
VPS8-201ENST00000287546 CSB-PGBD3P0DP91 1061 aa8.82□□□□□ -1
VPS8-201ENST00000287546 FRAT1Q92837 279 aaPredicted RBP8.82□□□□□ -1
VPS8-201ENST00000287546 ZMYM3Q14202 1370 aa8.82□□□□□ -1
VPS8-201ENST00000287546 MTHFSP49914 203 aa8.82□□□□□ -1
VPS8-201ENST00000287546 KIAA1210Q9ULL0 1709 aa8.81□□□□□ -1
VPS8-201ENST00000287546 ZMYM4Q5VZL5 1548 aa8.81□□□□□ -1
VPS8-201ENST00000287546 ANKRD36BQ8N2N9 1353 aa8.81□□□□□ -1
VPS8-201ENST00000287546 CDK19Q9BWU1 502 aa8.81□□□□□ -1
VPS8-201ENST00000287546 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
VPS8-201ENST00000287546 THEMISQ8N1K5 641 aaPredicted RBP8.81□□□□□ -1
VPS8-201ENST00000287546 ZNF692Q9BU19 519 aaPredicted RBP8.81□□□□□ -1
VPS8-201ENST00000287546 VWDEQ8N2E2 1590 aa8.8□□□□□ -1
VPS8-201ENST00000287546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
VPS8-201ENST00000287546 TNRQ92752 1358 aa8.8□□□□□ -1
VPS8-201ENST00000287546 UGGT1Q9NYU2 1555 aa8.8□□□□□ -1
VPS8-201ENST00000287546 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
VPS8-201ENST00000287546 ZC3H13Q5T200 1668 aaKnown RBP8.8□□□□□ -1
VPS8-201ENST00000287546 CENPQQ7L2Z9 268 aaPredicted RBP8.79□□□□□ -1
VPS8-201ENST00000287546 PMFBP1Q8TBY8 1022 aa8.79□□□□□ -1
VPS8-201ENST00000287546 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
VPS8-201ENST00000287546 POLR3AO14802 1390 aaPredicted RBP8.79□□□□□ -1
VPS8-201ENST00000287546 WDR63Q8IWG1 891 aa8.79□□□□□ -1
VPS8-201ENST00000287546 ADGRB3O60242 1522 aa8.79□□□□□ -1
VPS8-201ENST00000287546 ZFYVE9O95405 1425 aa8.79□□□□□ -1
VPS8-201ENST00000287546 TXNDC2Q86VQ3 553 aa8.79□□□□□ -1
VPS8-201ENST00000287546 GGNBP2Q9H3C7 697 aa8.79□□□□□ -1
VPS8-201ENST00000287546 SETBP1Q9Y6X0 1596 aa8.79□□□□□ -1
VPS8-201ENST00000287546 CT47B1P0C2W7 299 aaPredicted RBP8.78□□□□□ -1
VPS8-201ENST00000287546 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
VPS8-201ENST00000287546 EXOC6Q8TAG9 804 aa8.78□□□□□ -1
VPS8-201ENST00000287546 ARHGEF40Q8TER5 1519 aa8.78□□□□□ -1
VPS8-201ENST00000287546 ANP32EQ9BTT0 268 aa8.78□□□□□ -1
VPS8-201ENST00000287546 LAS1LQ9Y4W2 734 aaKnown RBP8.78□□□□□ -1
VPS8-201ENST00000287546 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1
VPS8-201ENST00000287546 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1
VPS8-201ENST00000287546 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.77□□□□□ -1
VPS8-201ENST00000287546 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
VPS8-201ENST00000287546 CHMP4AQ9BY43 222 aa8.77□□□□□ -1.01
VPS8-201ENST00000287546 YTHDC2Q9H6S0 1430 aaKnown RBP8.77□□□□□ -1.01
VPS8-201ENST00000287546 CAMSAP1Q5T5Y3 1602 aa8.77□□□□□ -1.01
VPS8-201ENST00000287546 RWDD1Q9H446 243 aaPredicted RBP8.77□□□□□ -1.01
VPS8-201ENST00000287546 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
VPS8-201ENST00000287546 CCDC61Q9Y6R9 512 aa8.77□□□□□ -1.01
VPS8-201ENST00000287546 CRBNQ96SW2 442 aa8.76□□□□□ -1.01
VPS8-201ENST00000287546 BLMP54132 1417 aaPredicted RBP8.76□□□□□ -1.01
VPS8-201ENST00000287546 SLFN5Q08AF3 891 aa8.76□□□□□ -1.01
VPS8-201ENST00000287546 SMC4Q9NTJ3 1288 aa8.76□□□□□ -1.01
VPS8-201ENST00000287546 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
VPS8-201ENST00000287546 ABCC11Q96J66 1382 aa8.76□□□□□ -1.01
VPS8-201ENST00000287546 RTF1Q92541 710 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms